BLASTX nr result

ID: Glycyrrhiza24_contig00015927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015927
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617494.1| Cc-nbs-lrr resistance protein [Medicago trun...   226   1e-57
ref|XP_002332442.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002333142.1| cc-nbs-lrr resistance protein [Populus trich...   103   1e-20
ref|XP_002319818.1| cc-nbs-lrr resistance protein [Populus trich...   103   1e-20
ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trich...   103   1e-20

>ref|XP_003617494.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355518829|gb|AET00453.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1924

 Score =  226 bits (577), Expect = 1e-57
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 1   VSHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQNGKTLVILDDVWEKLDFEAIG 180
           VSHNP+VT IQGQIAD LDLILREE+PIGRAQRLSTSLQN +TLVILDDVWE L+FEAIG
Sbjct: 204 VSHNPEVTYIQGQIADSLDLILREESPIGRAQRLSTSLQNERTLVILDDVWENLEFEAIG 263

Query: 181 IPPCCTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVP 360
           IPPCCTVLLTTRGR+VCV MNCQ+TVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVP
Sbjct: 264 IPPCCTVLLTTRGRDVCVCMNCQITVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVP 323

Query: 361 R 363
           R
Sbjct: 324 R 324



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
 Frame = +1

Query: 4    SHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQN-GKTLVILDDVWEKLDFEAIG 180
            S NP V  IQ +IA+ L+L     T  GRA+ +S++LQ+  + LVIL+DV  KL+ E IG
Sbjct: 1586 SQNPNVRTIQDKIAESLNLKFDRNTEAGRARTISSALQSRDRILVILNDVCSKLELEDIG 1645

Query: 181  IPPC----CTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIIDDS 330
            IP C    C VLLTTR +  C  M+CQ  + L  L ++EAWTL K+ + I D+S
Sbjct: 1646 IP-CNGNRCKVLLTTRRQRECALMDCQREIPLGPLSKDEAWTLLKKHSGIDDES 1698


>ref|XP_002332442.1| predicted protein [Populus trichocarpa] gi|222832795|gb|EEE71272.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/127 (48%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
 Frame = +1

Query: 1   VSHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQNGKTLVILDDVWEKLDFEAIG 180
           VS NP VT IQ Q+AD LDL   +++  GRA  L   LQ  K L++LDDVW+ +DF+ IG
Sbjct: 28  VSQNPNVTGIQDQMADSLDLKFDKKSKEGRANELWQRLQGKKMLIVLDDVWKDIDFQEIG 87

Query: 181 IP-----PCCTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIID-DSPYAL 342
           IP      CC +LLTTR  + C  M C+  V L L  EEEAW LF+  AD+ D DS    
Sbjct: 88  IPFGDDHRCCKILLTTRLEDRCSYMKCKEKVFLGLFSEEEAWALFRINADLRDEDSTLNT 147

Query: 343 KLKNVPR 363
             K V R
Sbjct: 148 VAKKVAR 154


>ref|XP_002333142.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834959|gb|EEE73408.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 166

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   VSHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQNGKTLVILDDVWEKLDFEAIG 180
           +S NP VT IQ ++AD LDL L +++  GRA  L   LQ  K L++LDDVW+ +DF+ IG
Sbjct: 31  LSQNPNVTGIQDRMADSLDLTLLKKSKEGRANELWQRLQGKKMLIVLDDVWKDIDFQEIG 90

Query: 181 IP-----PCCTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIIDD 327
           IP       C +LLTTR  ++C +M CQ  V LSLL E EAW LFK  A + D+
Sbjct: 91  IPFGDAHRGCKILLTTRLEDICKNMACQQKVFLSLLSENEAWALFKINAGLHDE 144


>ref|XP_002319818.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222858194|gb|EEE95741.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 168

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/127 (49%), Positives = 76/127 (59%), Gaps = 6/127 (4%)
 Frame = +1

Query: 1   VSHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQNGKTLVILDDVWEKLDFEAIG 180
           VS NP VT+IQ Q+AD L L   E++  GRA RL   LQ  K L+ILDDVW+ ++ E IG
Sbjct: 31  VSQNPNVTDIQDQMADSLGLRFDEKSKKGRADRLWQRLQGKKMLIILDDVWKVINMEEIG 90

Query: 181 IP-----PCCTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIID-DSPYAL 342
           IP       C +LLTTR +++C  M CQ  V LSLL E EAW LFK  A + D DS    
Sbjct: 91  IPFGDAHKGCKILLTTRLKDICSYMECQPIVLLSLLSENEAWALFKINAGLHDADSTLNT 150

Query: 343 KLKNVPR 363
             K V R
Sbjct: 151 VAKKVAR 157


>ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833055|gb|EEE71532.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 656

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/114 (49%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   VSHNPQVTNIQGQIADRLDLILREETPIGRAQRLSTSLQNGKTLVILDDVWEKLDFEAIG 180
           +S NP VT IQ Q+ADRL L   E +  GRA RL   +Q  K L++LDDVW+ +DF+ IG
Sbjct: 211 LSQNPNVTGIQDQMADRLGLKFDENSQEGRAGRLWQRMQGKKMLIVLDDVWKDIDFQEIG 270

Query: 181 IP-----PCCTVLLTTRGRNVCVSMNCQVTVELSLLDEEEAWTLFKRCADIIDD 327
           IP       C +LLTTR   +C SM+CQ  V L +L E EAW LFK  A + D+
Sbjct: 271 IPFGDAHRGCKILLTTRLEKICSSMDCQEKVFLGVLSENEAWALFKINAGLRDE 324


Top