BLASTX nr result

ID: Glycyrrhiza24_contig00015896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015896
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   244   2e-62
gb|AFK36982.1| unknown [Medicago truncatula]                          243   5e-62
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   202   1e-49
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]           201   2e-49
ref|XP_003625085.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   185   1e-44

>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 499

 Score =  244 bits (624), Expect = 2e-62
 Identities = 159/316 (50%), Positives = 200/316 (63%), Gaps = 1/316 (0%)
 Frame = +2

Query: 2    KFTLDIPLECSSVIESLNKWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTYLKL 181
            KFTL IP   +     + KWIL+LSR G+K + L + +   PY++P   FS  +LT++++
Sbjct: 177  KFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASNE-SVPYRVPSHFFSFQKLTHVRI 235

Query: 182  YFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPLLEELNISCCEGFECIDIF 361
              F+L VPPNFCGFK+L+  H   + FE  A L SLISGCPLLEEL I  C G ECID+ 
Sbjct: 236  CKFKLLVPPNFCGFKSLVHFHFERMTFEFGA-LESLISGCPLLEELYIVNCSGIECIDLS 294

Query: 362  VPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFDFIIKVLPKINSLT 541
             PTLKV S+  +  + IKSICL KAKNLIDLTL++         G   + K LP+I  LT
Sbjct: 295  APTLKVFSI--EHIQAIKSICLEKAKNLIDLTLVL------NQDGVSSLNKNLPEIQRLT 346

Query: 542  LGTTCHKILFADIISQTLLKSFSSLEYLKLIVV-LNERGEFLFIVDLLQNAPNLVELVIE 718
            +G    K+L+ADII  + L     L+YLKL  V L+ER E L+IV +L++A NLVELVIE
Sbjct: 347  MGFVS-KMLYADIIHPSQL---IGLKYLKLDRVNLDEREELLYIVSVLKSASNLVELVIE 402

Query: 719  SRTFGARDLLAESTFGDARVLAEELECKSRCLRQLQTVNIKVGSSFKYAMSLTRFILANC 898
            +      +     T    RV  EELEC S CLRQL  VNIKV S FK+ MSL RFILAN 
Sbjct: 403  NY----HEKGGYKTQAAGRV--EELECSSCCLRQLLIVNIKVRSYFKHVMSLIRFILANS 456

Query: 899  SSLRTLTLEVGRDDTR 946
            SSL+TLTL V R   +
Sbjct: 457  SSLKTLTLNVHRSHNK 472


>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score =  243 bits (620), Expect = 5e-62
 Identities = 160/318 (50%), Positives = 201/318 (63%), Gaps = 3/318 (0%)
 Frame = +2

Query: 2   KFTLDIPLECSSVIESLNKWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTYLKL 181
           KFTL IP   +     + KWIL+LSR G+K + L + +   PY++P   FS  +LT++++
Sbjct: 96  KFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASNE-SVPYRVPSHFFSFQKLTHVRI 154

Query: 182 YFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPLLEELNISCCEGFECIDIF 361
             F+L VPPNFCGFK+L+  H   + FE  A L SLISGCPLLEEL I  C G ECID+ 
Sbjct: 155 CKFKLLVPPNFCGFKSLVHFHFERMTFEFGA-LESLISGCPLLEELYIVNCSGIECIDLS 213

Query: 362 VPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFDFIIKVLPKINSLT 541
            PTLKV S+  +  + IKSICL KAKNLIDLTL++         G   + K LP+I  LT
Sbjct: 214 APTLKVFSI--EHIQAIKSICLEKAKNLIDLTLVL------NQDGVSSLNKNLPEIQRLT 265

Query: 542 LGTTCHKILFADII--SQTLLKSFSSLEYLKLIVV-LNERGEFLFIVDLLQNAPNLVELV 712
           +G    K+L+ADII  SQ +      L+YLKL  V L+ER E L+IV +L++A NLVELV
Sbjct: 266 MGFVS-KMLYADIIHPSQPI-----GLKYLKLDRVNLDEREELLYIVSVLKSASNLVELV 319

Query: 713 IESRTFGARDLLAESTFGDARVLAEELECKSRCLRQLQTVNIKVGSSFKYAMSLTRFILA 892
           IE+      +     T    RV  EELEC S CLRQL  VNIKV S FK+ MSL RFILA
Sbjct: 320 IENY----HEKGGYKTQAAGRV--EELECSSCCLRQLLIVNIKVRSYFKHVMSLIRFILA 373

Query: 893 NCSSLRTLTLEVGRDDTR 946
           N SSL+TLTL V R   +
Sbjct: 374 NSSSLKTLTLNVHRSHNK 391


>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 432

 Score =  202 bits (514), Expect = 1e-49
 Identities = 149/315 (47%), Positives = 188/315 (59%), Gaps = 8/315 (2%)
 Frame = +2

Query: 41  IESLNKWILYLSRNGIKELALENLDFECPYQMPFDV-FSCHELTYLKLYFFRLSVPPNFC 217
           IE L+KWI  LS   IK L L N +   P QM + V   C ELTY K   F LS+PP+F 
Sbjct: 106 IEHLDKWIPILSERNIKHLELVNHETH-PDQMLYIVDLPCKELTYSKFLGFDLSIPPDFS 164

Query: 218 GFKNLLALHLYYIAFESSAALRSLISGCPLLEELNISCCEGFECIDIFVPTLKVLSVYGD 397
           GF+ LL LHL ++ FE   A  SLISGCPLL+ L+   C+ FE  D   PTL+VL +  +
Sbjct: 165 GFERLLELHLLFVRFE-PGAFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLI--E 221

Query: 398 ENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFDFIIKVLPK-INSLTLGTT--CHKIL 568
            N  +KSICL KA NLIDL L        +   F  +IK LPK I  L++ +    +K+ 
Sbjct: 222 FNPKMKSICLKKANNLIDLAL-----KATESCTFG-LIKSLPKNIQRLSISSRRGIYKMQ 275

Query: 569 FADIISQTLLK-SFSSLEYLKL-IVVLNERGEFLFIVDLLQNAPNLVELVIESRTFGARD 742
           +A+II  TLLK SFSS++YLKL  V  N+RGE L+IV  LQ AP LVEL+I+S      D
Sbjct: 276 YANIIHPTLLKSSFSSMKYLKLGNVNFNDRGELLYIVSALQCAPGLVELIIQSYI----D 331

Query: 743 LLAESTFGDARVLAEELECKSRCLRQLQTVNIKVGS--SFKYAMSLTRFILANCSSLRTL 916
           L            +EELEC S CL  L+ VNI V +    ++AMSL RFILAN +SLRTL
Sbjct: 332 LSTVQVLDH----SEELECSSDCLNNLRMVNIHVRAYRISQHAMSLIRFILANSTSLRTL 387

Query: 917 TLEVGRDDTRLIDAH 961
           T  V    ++ +DAH
Sbjct: 388 TFIV-CPGSKSLDAH 401


>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 430

 Score =  201 bits (511), Expect = 2e-49
 Identities = 148/313 (47%), Positives = 185/313 (59%), Gaps = 6/313 (1%)
 Frame = +2

Query: 41  IESLNKWILYLSRNGIKELALENLDFECPYQMPFDV-FSCHELTYLKLYFFRLSVPPNFC 217
           IE L+KWI  LS   IK L L N +   P QM + V   C ELTY K   F LS+PP+F 
Sbjct: 106 IEHLDKWIPILSERNIKHLELVNHETH-PDQMLYIVDLPCKELTYSKFLGFDLSIPPDFS 164

Query: 218 GFKNLLALHLYYIAFESSAALRSLISGCPLLEELNISCCEGFECIDIFVPTLKVLSVYGD 397
           GF+ LL LHL ++ FE   A  SLISGCPLL+ L+   C+ FE  D   PTL+VL +  +
Sbjct: 165 GFERLLELHLLFVRFE-PGAFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLI--E 221

Query: 398 ENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFDFIIKVLPK-INSLTLGTTCHKILFA 574
            N  +KSICL KA NLIDL L        +   F  +IK LPK I  L++ +      +A
Sbjct: 222 FNPKMKSICLKKANNLIDLAL-----KATESCTFG-LIKSLPKNIQRLSISSRRGIYKYA 275

Query: 575 DIISQTLLK-SFSSLEYLKL-IVVLNERGEFLFIVDLLQNAPNLVELVIESRTFGARDLL 748
           +II  TLLK SFSS++YLKL  V  N+RGE L+IV  LQ AP LVEL+I+S      DL 
Sbjct: 276 NIIHPTLLKSSFSSMKYLKLGNVNFNDRGELLYIVSALQCAPGLVELIIQSYI----DLS 331

Query: 749 AESTFGDARVLAEELECKSRCLRQLQTVNIKVGS--SFKYAMSLTRFILANCSSLRTLTL 922
                      +EELEC S CL  L+ VNI V +    ++AMSL RFILAN +SLRTLT 
Sbjct: 332 TVQVLDH----SEELECSSDCLNNLRMVNIHVRAYRISQHAMSLIRFILANSTSLRTLTF 387

Query: 923 EVGRDDTRLIDAH 961
            V    ++ +DAH
Sbjct: 388 IV-CPGSKSLDAH 399


>ref|XP_003625085.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500100|gb|AES81303.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 410

 Score =  185 bits (470), Expect = 1e-44
 Identities = 146/331 (44%), Positives = 184/331 (55%), Gaps = 14/331 (4%)
 Frame = +2

Query: 2   KFTLDIPLECSS--VIESLNKWILYLSRNGIKELALENLDFECPYQMPFDVFSCHELTYL 175
           KF L IP + +   +IE L+ WI +LSR  IK L L N       QMP+ V +C      
Sbjct: 107 KFHLFIPYDYNFKIIIEFLSTWIPFLSRRDIKHLELLNYGTHVD-QMPYTVLAC------ 159

Query: 176 KLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPLLEELNISCCEGFECID 355
                          FK LL LHL  + FES A L  LISGCPLLE+L+I  CEGFE  D
Sbjct: 160 ---------------FKRLLNLHLSNVTFESGA-LEGLISGCPLLEKLSIQFCEGFEYFD 203

Query: 356 IFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFDFIIKVLPKINS 535
           I V TLKVL +    ++ +KSICL KA NLIDLTL         G    +  +   K +S
Sbjct: 204 ISVTTLKVLLL--QFHQEMKSICLKKAINLIDLTL-----KATNGCVCIWFDQKFTKKHS 256

Query: 536 LTLG---TTC----HKILFADIISQTLLKS-FSSLEYLKL-IVVLNERGEFLFIVDLLQN 688
                  T C     ++ +A+II QTLLKS FSS++YLKL  V  N+RGE L+IV  LQ 
Sbjct: 257 KAFYWSMTRCLQVKREMQYANIIPQTLLKSSFSSMKYLKLGNVNFNDRGELLYIVSALQC 316

Query: 689 APNLVELVIESRTFGARDLLAESTFGDARVLAEELECKSRCLRQLQTVNIKVGSSFKYAM 868
           A  LVELVI+S        +++ +        EELEC S CL  LQ VNI V +  ++AM
Sbjct: 317 ASGLVELVIQSFVDVCNIQVSDHS--------EELECNSYCLNNLQIVNIHVRAGSQHAM 368

Query: 869 SLTRFILANCSSLRTLTLEV---GRDDTRLI 952
           SL RFILAN +SLRTLT +V    ++ TRL+
Sbjct: 369 SLIRFILANSTSLRTLTFKVAPSSKNFTRLV 399


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