BLASTX nr result

ID: Glycyrrhiza24_contig00015861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015861
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   126   7e-27
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   125   1e-26
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   116   9e-24
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   116   9e-24
gb|AFK46469.1| unknown [Lotus japonicus]                              113   7e-23

>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  126 bits (317), Expect = 7e-27
 Identities = 67/108 (62%), Positives = 72/108 (66%)
 Frame = +3

Query: 3   EKSMTERREIMHSFMXXXXXXXXXXXXXXXXXXXXXXXXXIVFDMPNSIKEYVHQVGRAS 182
           EKSM ERRE M SF+                         IVFDMPN+IKEYVHQ+GRAS
Sbjct: 408 EKSMKERRETMQSFLVGEVPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRAS 467

Query: 183 RMGEEGQAIVFVNEENKKVFVELVDVLKSGGAAVPWELINSQYTTGFF 326
           RMGEEGQ IVFVNEENK VF EL+DVLKSGGAAVP EL NS+Y T  F
Sbjct: 468 RMGEEGQGIVFVNEENKNVFAELIDVLKSGGAAVPRELANSRYATRVF 515


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  125 bits (314), Expect = 1e-26
 Identities = 65/108 (60%), Positives = 72/108 (66%)
 Frame = +3

Query: 3   EKSMTERREIMHSFMXXXXXXXXXXXXXXXXXXXXXXXXXIVFDMPNSIKEYVHQVGRAS 182
           EKSM ERRE M S +                         IVFDMPN+IKEYVHQ+GRAS
Sbjct: 408 EKSMKERRETMQSLLVGEVPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRAS 467

Query: 183 RMGEEGQAIVFVNEENKKVFVELVDVLKSGGAAVPWELINSQYTTGFF 326
           RMGEEGQ IVFVNEENK +F EL++VLKSGGAAVP EL NS+Y TG F
Sbjct: 468 RMGEEGQGIVFVNEENKNIFAELIEVLKSGGAAVPRELANSRYATGVF 515


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  116 bits (290), Expect = 9e-24
 Identities = 60/106 (56%), Positives = 71/106 (66%)
 Frame = +3

Query: 3   EKSMTERREIMHSFMXXXXXXXXXXXXXXXXXXXXXXXXXIVFDMPNSIKEYVHQVGRAS 182
           EKSM ERREIM SF+                         IVFDMPNSIKEYVHQ+GRAS
Sbjct: 417 EKSMKERREIMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRAS 476

Query: 183 RMGEEGQAIVFVNEENKKVFVELVDVLKSGGAAVPWELINSQYTTG 320
           R+GEEG AI+F+NEEN+ +F ELV++LKS GAA+P EL NS+Y  G
Sbjct: 477 RLGEEGTAILFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLG 522


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  116 bits (290), Expect = 9e-24
 Identities = 60/109 (55%), Positives = 71/109 (65%)
 Frame = +3

Query: 3   EKSMTERREIMHSFMXXXXXXXXXXXXXXXXXXXXXXXXXIVFDMPNSIKEYVHQVGRAS 182
           EKSM ERREIM SF+                         IVFDMPN IKEYVHQ+GRAS
Sbjct: 404 EKSMKERREIMKSFLVGEVPLVVATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRAS 463

Query: 183 RMGEEGQAIVFVNEENKKVFVELVDVLKSGGAAVPWELINSQYTTGFFP 329
           RMGE+G +IVFVNEEN+ +F +LV+VLKS GA +P EL+NS+Y    FP
Sbjct: 464 RMGEDGTSIVFVNEENRNLFPDLVEVLKSSGAVIPRELVNSRYVKRSFP 512


>gb|AFK46469.1| unknown [Lotus japonicus]
          Length = 117

 Score =  113 bits (282), Expect = 7e-23
 Identities = 61/104 (58%), Positives = 64/104 (61%)
 Frame = +3

Query: 12  MTERREIMHSFMXXXXXXXXXXXXXXXXXXXXXXXXXIVFDMPNSIKEYVHQVGRASRMG 191
           M ERREIM SF                          IVFDMPNSI EYVH +GRASRMG
Sbjct: 1   MKERREIMQSFAAGEVTVIVATGVLGRGVDLLGVRQVIVFDMPNSIDEYVHMIGRASRMG 60

Query: 192 EEGQAIVFVNEENKKVFVELVDVLKSGGAAVPWELINSQYTTGF 323
           EEGQAIVFVN  NKKVF EL+ VLKS GA VP EL+NS YT  F
Sbjct: 61  EEGQAIVFVNSSNKKVFCELIGVLKSAGAPVPRELLNSHYTAAF 104


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