BLASTX nr result

ID: Glycyrrhiza24_contig00015826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015826
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817...   179   8e-43
ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781...   173   5e-41
ref|XP_004138053.1| PREDICTED: U3 small nucleolar ribonucleoprot...   139   1e-30
ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein...   130   3e-28

>ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817724 [Glycine max]
          Length = 547

 Score =  179 bits (454), Expect = 8e-43
 Identities = 92/125 (73%), Positives = 100/125 (80%)
 Frame = +2

Query: 23  MANASDAGVEALRLLKATDPPSWLVPNPSLSETARAASQYLFSSLRPFTPKSPLDHLLVD 202
           MAN SDAGVEALR LKAT+PP +L PNP+LSE AR ASQYLFSSL PF+PKSPLD LLVD
Sbjct: 1   MANTSDAGVEALRRLKATEPPLFLAPNPALSEAARTASQYLFSSLNPFSPKSPLDQLLVD 60

Query: 203 GFDAEQIWQQIDLQSQPLLSTLRRRVKHLAKNPQEIPQLKVPXXXXXXXXXXXXRGEWDE 382
           GFDAEQIWQQIDLQ+QPLLSTLRRRVK L +NP+EI QLKVP              EW+E
Sbjct: 61  GFDAEQIWQQIDLQTQPLLSTLRRRVKQLVENPEEISQLKVPSEGGNKKEENIL-DEWEE 119

Query: 383 ESDGF 397
           ESDGF
Sbjct: 120 ESDGF 124


>ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781093 [Glycine max]
          Length = 516

 Score =  173 bits (438), Expect = 5e-41
 Identities = 87/122 (71%), Positives = 100/122 (81%)
 Frame = +2

Query: 32  ASDAGVEALRLLKATDPPSWLVPNPSLSETARAASQYLFSSLRPFTPKSPLDHLLVDGFD 211
           ++DAGVEALRLLKAT+PPS+L PNP+LSE AR ASQYLFSSL+PF+PKSPLD LLVDGFD
Sbjct: 5   SNDAGVEALRLLKATEPPSFLTPNPALSEAARTASQYLFSSLKPFSPKSPLDQLLVDGFD 64

Query: 212 AEQIWQQIDLQSQPLLSTLRRRVKHLAKNPQEIPQLKVPXXXXXXXXXXXXRGEWDEESD 391
           AEQIWQQIDLQ+QPLLST+RRRVK L +NP+EI QLK              + EW+EESD
Sbjct: 65  AEQIWQQIDLQTQPLLSTIRRRVKQLVENPEEISQLK-----------EKSQDEWEEESD 113

Query: 392 GF 397
           GF
Sbjct: 114 GF 115


>ref|XP_004138053.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein mpp10-like
           [Cucumis sativus]
          Length = 538

 Score =  139 bits (349), Expect = 1e-30
 Identities = 66/96 (68%), Positives = 78/96 (81%)
 Frame = +2

Query: 38  DAGVEALRLLKATDPPSWLVPNPSLSETARAASQYLFSSLRPFTPKSPLDHLLVDGFDAE 217
           +AG++ L  LK+TDPP WL P+PSLS+ AR ASQ LFS L+PF PKSP DHLLVDGFDAE
Sbjct: 12  EAGLKPLHSLKSTDPPLWLAPSPSLSQVARLASQSLFSMLKPFNPKSPFDHLLVDGFDAE 71

Query: 218 QIWQQIDLQSQPLLSTLRRRVKHLAKNPQEIPQLKV 325
           QIWQQIDLQSQPLL+++RR +K   KNP+ I  LKV
Sbjct: 72  QIWQQIDLQSQPLLASVRRDLKRFEKNPEAISNLKV 107


>ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|222868605|gb|EEF05736.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  132 bits (332), Expect = 1e-28
 Identities = 66/99 (66%), Positives = 78/99 (78%)
 Frame = +2

Query: 14  QPVMANASDAGVEALRLLKATDPPSWLVPNPSLSETARAASQYLFSSLRPFTPKSPLDHL 193
           +PV A A  AG+EAL  LK+ DPP WL P+ SLS+TAR A ++LFSS+ P  PKSP D L
Sbjct: 3   KPVEAEA--AGMEALNRLKSIDPPLWLAPSSSLSQTARTACKHLFSSINPHVPKSPFDQL 60

Query: 194 LVDGFDAEQIWQQIDLQSQPLLSTLRRRVKHLAKNPQEI 310
           L+DG DAEQIWQQIDLQSQPLLS+LRR+V H  KNP+EI
Sbjct: 61  LIDGCDAEQIWQQIDLQSQPLLSSLRRQVLHFQKNPEEI 99


>ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein mpp10, putative
           [Ricinus communis] gi|223550496|gb|EEF51983.1| U3 small
           nucleolar ribonucleoprotein protein mpp10, putative
           [Ricinus communis]
          Length = 533

 Score =  130 bits (328), Expect = 3e-28
 Identities = 61/96 (63%), Positives = 80/96 (83%)
 Frame = +2

Query: 23  MANASDAGVEALRLLKATDPPSWLVPNPSLSETARAASQYLFSSLRPFTPKSPLDHLLVD 202
           M+ AS AG++AL  LK+ +PP WL P+ +LS+T+RAASQ+LFS L+P  PKSP D LLV+
Sbjct: 1   MSEASKAGMDALHSLKSAEPPLWLTPSATLSQTSRAASQHLFSCLKPHAPKSPFDKLLVE 60

Query: 203 GFDAEQIWQQIDLQSQPLLSTLRRRVKHLAKNPQEI 310
           GFDAEQIWQQIDL +QPLLS++R +V++L KNP+EI
Sbjct: 61  GFDAEQIWQQIDLLTQPLLSSIRHQVRNLEKNPEEI 96


Top