BLASTX nr result

ID: Glycyrrhiza24_contig00015824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015824
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   196   4e-48
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   191   1e-46
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   174   3e-41
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   173   5e-41
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   167   2e-39

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  196 bits (499), Expect = 4e-48
 Identities = 103/135 (76%), Positives = 108/135 (80%)
 Frame = +1

Query: 1    LSKCHLAKIVRQDARLLDTPVAESGENWSVGXXXXXXXXXXXXXXXXXXXXDEATASIDT 180
            LSKCHLA+IVR+D RLLD PVAE+GENWSVG                    DEATASIDT
Sbjct: 1316 LSKCHLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDT 1375

Query: 181  TTDNLIQKTIREETNGCTVITVAHRIPTVIDNDLVLVLDQGKIVEYDHPAQLLQNNSSSF 360
             TDNLIQKTIREETNGCTVITVAHRIPTVIDND VLVLD+G IVEYD PAQLLQNNSSSF
Sbjct: 1376 ATDNLIQKTIREETNGCTVITVAHRIPTVIDNDRVLVLDEGTIVEYDEPAQLLQNNSSSF 1435

Query: 361  SKLVSEFLSRSSQST 405
            SKLVSEFL RSSQS+
Sbjct: 1436 SKLVSEFLRRSSQSS 1450


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  191 bits (486), Expect = 1e-46
 Identities = 100/134 (74%), Positives = 106/134 (79%)
 Frame = +1

Query: 1    LSKCHLAKIVRQDARLLDTPVAESGENWSVGXXXXXXXXXXXXXXXXXXXXDEATASIDT 180
            LSKCHLA+IVR+D RLLD PVAE+GENWSVG                    DEATASIDT
Sbjct: 1314 LSKCHLAEIVRRDQRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDT 1373

Query: 181  TTDNLIQKTIREETNGCTVITVAHRIPTVIDNDLVLVLDQGKIVEYDHPAQLLQNNSSSF 360
             TDNLIQKTIREET+GCTVITVAHRIPTVIDND VLVLD+G IVEYD PAQLLQNNSSSF
Sbjct: 1374 ATDNLIQKTIREETSGCTVITVAHRIPTVIDNDRVLVLDEGTIVEYDEPAQLLQNNSSSF 1433

Query: 361  SKLVSEFLSRSSQS 402
            SKLV+EF  RSSQS
Sbjct: 1434 SKLVTEFFRRSSQS 1447


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  174 bits (440), Expect = 3e-41
 Identities = 90/135 (66%), Positives = 102/135 (75%)
 Frame = +1

Query: 1    LSKCHLAKIVRQDARLLDTPVAESGENWSVGXXXXXXXXXXXXXXXXXXXXDEATASIDT 180
            L KC LA IVRQD+RLL+ PVAE GENWSVG                    DEATASIDT
Sbjct: 1327 LKKCRLADIVRQDSRLLEAPVAEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDT 1386

Query: 181  TTDNLIQKTIREETNGCTVITVAHRIPTVIDNDLVLVLDQGKIVEYDHPAQLLQNNSSSF 360
             TDN+IQ  IREET+ CTVITVAHRIPTVIDNDLVLVLD+GK++EYD P QLL+++SSSF
Sbjct: 1387 ATDNIIQGAIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVIEYDCPGQLLKDSSSSF 1446

Query: 361  SKLVSEFLSRSSQST 405
            SKLV+EFL RSS+ T
Sbjct: 1447 SKLVAEFLRRSSKRT 1461


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  173 bits (438), Expect = 5e-41
 Identities = 90/133 (67%), Positives = 99/133 (74%)
 Frame = +1

Query: 1    LSKCHLAKIVRQDARLLDTPVAESGENWSVGXXXXXXXXXXXXXXXXXXXXDEATASIDT 180
            L+KC LA  V+QD RLLD PVAE GENWSVG                    DEATASIDT
Sbjct: 911  LNKCRLADTVKQDKRLLDAPVAEDGENWSVGQRQLVCLARVMLKKRRILVLDEATASIDT 970

Query: 181  TTDNLIQKTIREETNGCTVITVAHRIPTVIDNDLVLVLDQGKIVEYDHPAQLLQNNSSSF 360
             TDN+IQ TIREET+ CTVITVAHRIPTVIDNDLVLVLD GK+VEYD P +LL++NSSSF
Sbjct: 971  ATDNIIQGTIREETSTCTVITVAHRIPTVIDNDLVLVLDDGKVVEYDSPVKLLEDNSSSF 1030

Query: 361  SKLVSEFLSRSSQ 399
            SKLV+EFL RS Q
Sbjct: 1031 SKLVTEFLRRSMQ 1043


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            3-like [Cucumis sativus]
          Length = 1444

 Score =  167 bits (424), Expect = 2e-39
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = +1

Query: 1    LSKCHLAKIVRQDARLLDTPVAESGENWSVGXXXXXXXXXXXXXXXXXXXXDEATASIDT 180
            L KC  ++I+R D  +L+  VAE GENWSVG                    DEATASIDT
Sbjct: 1295 LHKCRFSEIIRTDQAILEARVAEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDT 1354

Query: 181  TTDNLIQKTIREETNGCTVITVAHRIPTVIDNDLVLVLDQGKIVEYDHPAQLLQNNSSSF 360
             T+N+IQ+TI+EETNGCTVITVAHRIPT+IDNDLVLVLD+GK++E+D P+QLL+NNSS F
Sbjct: 1355 ATENIIQETIKEETNGCTVITVAHRIPTIIDNDLVLVLDEGKVIEFDSPSQLLKNNSSMF 1414

Query: 361  SKLVSEFLSRSSQS 402
            SKLV+EFL RSS S
Sbjct: 1415 SKLVAEFLRRSSSS 1428


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