BLASTX nr result

ID: Glycyrrhiza24_contig00015790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015790
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycin...   535   e-150
ref|XP_003596761.1| hypothetical protein MTR_2g085340 [Medicago ...   528   e-148
gb|ACJ85521.1| unknown [Medicago truncatula]                          527   e-147
ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   421   e-115
ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH...   413   e-113

>ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycine max]
            gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score =  535 bits (1378), Expect = e-150
 Identities = 274/317 (86%), Positives = 286/317 (90%)
 Frame = -2

Query: 1136 SFGTAWCLRRVAHAFALSHSHTLRTNSNLSFQRXXXXXXXXXXXXXXXXXXXTVQALKGE 957
            SFGT WCLRR A AFA+SHSH LR N  LS QR                   TVQALKGE
Sbjct: 7    SFGTTWCLRRAAQAFAISHSHILRNNVKLSLQRNFCSHLLSVSTSLASGVSQTVQALKGE 66

Query: 956  VDVLLKGVGEKSVAKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAI 777
            VD+LLKGVGE+SV KEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAI
Sbjct: 67   VDLLLKGVGERSVTKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAI 126

Query: 776  AQGGYPQAERCRISVGHPDELTSDPDIVSALSITGNFHFEPCSHGDFLGSILGTGIVRDK 597
            AQGGYPQAERCRISVGHP+ELTSDPDI+SALSITGNF FEPCSHGDFLGSILGTGIVR+K
Sbjct: 127  AQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFQFEPCSHGDFLGSILGTGIVREK 186

Query: 596  IGDIILQGEQGAQILVVPELVEFLMSALDKVRNVPVSCSKIPLISLDYEPPRTKSFKTVE 417
            +GDIILQGEQGAQI+VVPELVEFLMS L KVRNVPVSC+KIPLISLDYEPPRTKSFKT+E
Sbjct: 187  LGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTKSFKTIE 246

Query: 416  ASLRVDALASAGFKISRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSVSGKGRLKIG 237
            ASLRVDALASAGFK+SRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVS+SGKGRLKIG
Sbjct: 247  ASLRVDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGKGRLKIG 306

Query: 236  EINSTKKGKFAVELIRY 186
            EINSTKKGKFAVELIRY
Sbjct: 307  EINSTKKGKFAVELIRY 323


>ref|XP_003596761.1| hypothetical protein MTR_2g085340 [Medicago truncatula]
            gi|355485809|gb|AES67012.1| hypothetical protein
            MTR_2g085340 [Medicago truncatula]
          Length = 325

 Score =  528 bits (1361), Expect = e-148
 Identities = 269/318 (84%), Positives = 288/318 (90%), Gaps = 1/318 (0%)
 Frame = -2

Query: 1136 SFGTAWCLRRVAHAFALSHSHTLRTN-SNLSFQRXXXXXXXXXXXXXXXXXXXTVQALKG 960
            SFGTAWCLRRV  AFALSHSHTLRTN +NLSFQR                   TVQA K 
Sbjct: 7    SFGTAWCLRRVTQAFALSHSHTLRTNGNNLSFQRTLTSHLLSFSTSSDSGASTTVQASKR 66

Query: 959  EVDVLLKGVGEKSVAKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKA 780
            EVDVLLKGVGEKSV  EVKH+LEMARRASLKREILHT+FLTPPVLKESMQVLEKLAD+KA
Sbjct: 67   EVDVLLKGVGEKSVENEVKHVLEMARRASLKREILHTNFLTPPVLKESMQVLEKLADIKA 126

Query: 779  IAQGGYPQAERCRISVGHPDELTSDPDIVSALSITGNFHFEPCSHGDFLGSILGTGIVRD 600
            +AQGGYPQAERCRISVGHPDELTSDPD++SALSITGNF FEPCSHGDFLGSILGTGI R+
Sbjct: 127  LAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIARE 186

Query: 599  KIGDIILQGEQGAQILVVPELVEFLMSALDKVRNVPVSCSKIPLISLDYEPPRTKSFKTV 420
            K+GDIILQGEQGAQI+VVPELVEFL SALDKVRNVPV+C+KIPLISLDYEPPRTKSFKT+
Sbjct: 187  KVGDIILQGEQGAQIIVVPELVEFLTSALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTI 246

Query: 419  EASLRVDALASAGFKISRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSVSGKGRLKI 240
            EASLRVDA+ASAGFKISRSKLVDMISNGDVRINWIP+TTKGTT+KSGD+VSVSG GRLKI
Sbjct: 247  EASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKI 306

Query: 239  GEINSTKKGKFAVELIRY 186
            GE+N+TKKGKFAVELIRY
Sbjct: 307  GEVNTTKKGKFAVELIRY 324


>gb|ACJ85521.1| unknown [Medicago truncatula]
          Length = 325

 Score =  527 bits (1357), Expect = e-147
 Identities = 268/318 (84%), Positives = 288/318 (90%), Gaps = 1/318 (0%)
 Frame = -2

Query: 1136 SFGTAWCLRRVAHAFALSHSHTLRTN-SNLSFQRXXXXXXXXXXXXXXXXXXXTVQALKG 960
            SFGTAWCLRRV  AFALSHSHTLRTN +NLSFQR                   TVQA K 
Sbjct: 7    SFGTAWCLRRVTQAFALSHSHTLRTNGNNLSFQRTLTSHLLSFSTSSDSGASTTVQASKR 66

Query: 959  EVDVLLKGVGEKSVAKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKA 780
            EVDVLLKGVGEKSV  EVKH+LEMARRASLKREILHT+FLTPPVLKESM+VLEKLAD+KA
Sbjct: 67   EVDVLLKGVGEKSVENEVKHVLEMARRASLKREILHTNFLTPPVLKESMRVLEKLADIKA 126

Query: 779  IAQGGYPQAERCRISVGHPDELTSDPDIVSALSITGNFHFEPCSHGDFLGSILGTGIVRD 600
            +AQGGYPQAERCRISVGHPDELTSDPD++SALSITGNF FEPCSHGDFLGSILGTGI R+
Sbjct: 127  LAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIARE 186

Query: 599  KIGDIILQGEQGAQILVVPELVEFLMSALDKVRNVPVSCSKIPLISLDYEPPRTKSFKTV 420
            K+GDIILQGEQGAQI+VVPELVEFL SALDKVRNVPV+C+KIPLISLDYEPPRTKSFKT+
Sbjct: 187  KVGDIILQGEQGAQIIVVPELVEFLTSALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTI 246

Query: 419  EASLRVDALASAGFKISRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSVSGKGRLKI 240
            EASLRVDA+ASAGFKISRSKLVDMISNGDVRINWIP+TTKGTT+KSGD+VSVSG GRLKI
Sbjct: 247  EASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKI 306

Query: 239  GEINSTKKGKFAVELIRY 186
            GE+N+TKKGKFAVELIRY
Sbjct: 307  GEVNTTKKGKFAVELIRY 324


>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
           gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
           thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
           [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1|
           Unknown protein [Arabidopsis thaliana]
           gi|30984534|gb|AAP42730.1| At1g53120 [Arabidopsis
           thaliana] gi|332194772|gb|AEE32893.1| RNA-binding S4
           domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  421 bits (1081), Expect = e-115
 Identities = 202/263 (76%), Positives = 243/263 (92%)
 Frame = -2

Query: 974 QALKGEVDVLLKGVGEKSVAKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKL 795
           +A+KG+VD LLKGVG+++VAKEVK ILEMARRAS KRE+LHTDFLTPP++KES+ +LEK 
Sbjct: 57  EAIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKF 116

Query: 794 ADVKAIAQGGYPQAERCRISVGHPDELTSDPDIVSALSITGNFHFEPCSHGDFLGSILGT 615
           ADVK +AQGGYP+AERCRIS+GHPD LTSDPDIV+ALSITGNF F+PCSHGDFLG+ILGT
Sbjct: 117 ADVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGT 176

Query: 614 GIVRDKIGDIILQGEQGAQILVVPELVEFLMSALDKVRNVPVSCSKIPLISLDYEPPRTK 435
           GI R+K+GDI++Q E+GAQ+L+VPELV+F+++ALDKV NV V+CSKIPL++L+YEPPRT 
Sbjct: 177 GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTN 236

Query: 434 SFKTVEASLRVDALASAGFKISRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSVSGK 255
           SFKTVEASLR+DA+ASAGFKISRSKLVD+IS+ DVR+NW  VT  GT +K+GD+VSVSGK
Sbjct: 237 SFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGK 296

Query: 254 GRLKIGEINSTKKGKFAVELIRY 186
           GRLKIGEIN TKKGKFAVE+IRY
Sbjct: 297 GRLKIGEINETKKGKFAVEIIRY 319


>ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH-like [Cucumis sativus]
           gi|449495519|ref|XP_004159865.1| PREDICTED: putative
           RNA-binding protein YlmH-like [Cucumis sativus]
          Length = 319

 Score =  413 bits (1062), Expect = e-113
 Identities = 202/264 (76%), Positives = 239/264 (90%)
 Frame = -2

Query: 977 VQALKGEVDVLLKGVGEKSVAKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEK 798
           VQA+KG++DVLL GVG+K V  +VK IL MA+R+  +RE+LHT+FLTPPV+KESM  ++K
Sbjct: 55  VQAVKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQK 114

Query: 797 LADVKAIAQGGYPQAERCRISVGHPDELTSDPDIVSALSITGNFHFEPCSHGDFLGSILG 618
           LADVKAIAQGGYP+AERCRISVGH DELTSDPDI+SALSITGNF F PCSHGDFLGSILG
Sbjct: 115 LADVKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILG 174

Query: 617 TGIVRDKIGDIILQGEQGAQILVVPELVEFLMSALDKVRNVPVSCSKIPLISLDYEPPRT 438
           TGI R+K+GDI+LQ E GAQ+++VPELV+FL+S+L KV NV VSC++IPL +L+YEPP+T
Sbjct: 175 TGIAREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKT 234

Query: 437 KSFKTVEASLRVDALASAGFKISRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSVSG 258
           K+FKT+EASLRVDA+ASAGFKISRSKLVD+IS+GDVR+NW  +T  GT LK+GDIVSVSG
Sbjct: 235 KTFKTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSG 294

Query: 257 KGRLKIGEINSTKKGKFAVELIRY 186
           KGRLKIGEINSTKKGKFAVELIRY
Sbjct: 295 KGRLKIGEINSTKKGKFAVELIRY 318


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