BLASTX nr result

ID: Glycyrrhiza24_contig00015765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015765
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...   317   1e-84
ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like prot...   303   2e-80
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   230   1e-58
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-52
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-52

>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score =  317 bits (811), Expect = 1e-84
 Identities = 152/187 (81%), Positives = 172/187 (91%), Gaps = 1/187 (0%)
 Frame = +2

Query: 5   FPKVLDVNYLMKKSGTMRKVTSIPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALR 184
           FP+VLD+NYLMKK GTMRKVT+IPSAI+YLNNHFFAPVD+EIPD+ATV +G+IHG+ ALR
Sbjct: 358 FPEVLDINYLMKKHGTMRKVTNIPSAISYLNNHFFAPVDLEIPDQATVKEGKIHGLTALR 417

Query: 185 LSYLFTKLCSILKISPVVTESGNKHLAPELEDFTNVFHPFSANIQEACN-DDVGVWTNNT 361
           LSYLF KLCSILKISP VTESGNKHLAPELEDFTNVFHPFS  IQ++ N  DVG+WTNNT
Sbjct: 418 LSYLFMKLCSILKISPNVTESGNKHLAPELEDFTNVFHPFSTPIQDSFNGGDVGMWTNNT 477

Query: 362 RKVSCEHLVFLWGFKFGMTAGMLKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKD 541
           +KVSCEHLVFLWGFK G+TAGMLKS+L +SHDIFS +FDVKLVDKSCAIVVFWQ G+SK 
Sbjct: 478 KKVSCEHLVFLWGFKIGITAGMLKSLLRSSHDIFSREFDVKLVDKSCAIVVFWQSGVSKR 537

Query: 542 FLDVMNS 562
           FLD++NS
Sbjct: 538 FLDILNS 544


>ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago
           truncatula] gi|355497742|gb|AES78945.1| Poly(A)-specific
           ribonuclease PARN-like protein [Medicago truncatula]
          Length = 513

 Score =  303 bits (775), Expect = 2e-80
 Identities = 144/186 (77%), Positives = 167/186 (89%), Gaps = 1/186 (0%)
 Frame = +2

Query: 5   FPKVLDVNYLMKKSGTMRKVTSIPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALR 184
           FPKV+DVNYL+KKSGTM+KVT+I +A++Y+N HF A V+MEIPD+ T+NKG+I G++ALR
Sbjct: 253 FPKVIDVNYLLKKSGTMKKVTNIRNALSYMNTHFLALVEMEIPDQDTINKGKIDGLDALR 312

Query: 185 LSYLFTKLCSILKISPVVTESGNKHLAPELEDFTNVFHPFSANIQE-ACNDDVGVWTNNT 361
           LSYLF KLCS+LKISPVVTESGN+ LAP+LEDFTNVFH  SANIQE +CN+DV VWTNNT
Sbjct: 313 LSYLFMKLCSVLKISPVVTESGNRQLAPQLEDFTNVFHSCSANIQESSCNEDVSVWTNNT 372

Query: 362 RKVSCEHLVFLWGFKFGMTAGMLKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKD 541
           RK +CEHLVFLWGFKFGMTAGMLKSVL  SHDIF  +FDVK VDKSCA VVFW+PGLSKD
Sbjct: 373 RKANCEHLVFLWGFKFGMTAGMLKSVLRESHDIFLEEFDVKFVDKSCAFVVFWEPGLSKD 432

Query: 542 FLDVMN 559
           FL+VMN
Sbjct: 433 FLNVMN 438


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  230 bits (587), Expect = 1e-58
 Identities = 108/184 (58%), Positives = 141/184 (76%)
 Frame = +2

Query: 5   FPKVLDVNYLMKKSGTMRKVTSIPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALR 184
           FP+V+DVN+LMK+   ++KVT+IP A +YL N FFAPVDMEIP  A VN+G+IHG N +R
Sbjct: 363 FPQVIDVNHLMKEISPLKKVTNIPMATSYLKNWFFAPVDMEIPFPAMVNEGKIHGHNVMR 422

Query: 185 LSYLFTKLCSILKISPVVTESGNKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTR 364
           +  LF KLC ILK++P   +S  K+LA  +E + N+F P+    QE  ++DV +WTNNTR
Sbjct: 423 ICQLFAKLCYILKLAPNSIQSNEKNLASAIEAYVNIFSPYFPGPQEPTDEDVRIWTNNTR 482

Query: 365 KVSCEHLVFLWGFKFGMTAGMLKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDF 544
           KVSC+ LVFLWGF++ M+AGMLKS+L  SH +FS +FDV+ VDKSCAIVVFW+PGLS   
Sbjct: 483 KVSCQDLVFLWGFRYRMSAGMLKSLLQQSHKVFSEEFDVRFVDKSCAIVVFWEPGLSNTL 542

Query: 545 LDVM 556
           LDV+
Sbjct: 543 LDVL 546


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  209 bits (531), Expect = 3e-52
 Identities = 100/185 (54%), Positives = 132/185 (71%)
 Frame = +2

Query: 5   FPKVLDVNYLMKKSGTMRKVTSIPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALR 184
           FP V+DVN+LMK+   +RKVTSIP AI+ L N FF P+DMEIP +A  N+  IHG N ++
Sbjct: 369 FPLVIDVNHLMKEISPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVK 428

Query: 185 LSYLFTKLCSILKISPVVTESGNKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTR 364
           +  LF +LCSILKI P   +S  +  A  LE + N+F PF    +E  + ++ +WTNNTR
Sbjct: 429 ICELFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTR 488

Query: 365 KVSCEHLVFLWGFKFGMTAGMLKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDF 544
            VSCE +VFLWGF   +TAG+LKS+L  SH+ FS +FDV+LVD SCAIV+FWQ GL++ F
Sbjct: 489 TVSCEDMVFLWGFGDRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETF 548

Query: 545 LDVMN 559
           L+ MN
Sbjct: 549 LNTMN 553


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  209 bits (531), Expect = 3e-52
 Identities = 100/185 (54%), Positives = 132/185 (71%)
 Frame = +2

Query: 5   FPKVLDVNYLMKKSGTMRKVTSIPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALR 184
           FP V+DVN+LMK+   +RKVTSIP AI+ L N FF P+DMEIP +A  N+  IHG N ++
Sbjct: 367 FPLVIDVNHLMKEISPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVK 426

Query: 185 LSYLFTKLCSILKISPVVTESGNKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTR 364
           +  LF +LCSILKI P   +S  +  A  LE + N+F PF    +E  + ++ +WTNNTR
Sbjct: 427 ICELFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTR 486

Query: 365 KVSCEHLVFLWGFKFGMTAGMLKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDF 544
            VSCE +VFLWGF   +TAG+LKS+L  SH+ FS +FDV+LVD SCAIV+FWQ GL++ F
Sbjct: 487 TVSCEDMVFLWGFGDRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETF 546

Query: 545 LDVMN 559
           L+ MN
Sbjct: 547 LNTMN 551


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