BLASTX nr result

ID: Glycyrrhiza24_contig00015760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015760
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   376   e-102
ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-l...   370   e-100
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   369   e-99 
emb|CBI27238.3| unnamed protein product [Vitis vinifera]              369   e-99 
ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-l...   348   1e-93

>ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
            domain-containing protein 1-like [Glycine max]
          Length = 847

 Score =  376 bits (966), Expect = e-102
 Identities = 193/229 (84%), Positives = 208/229 (90%), Gaps = 1/229 (0%)
 Frame = +1

Query: 274  EARSLFVKNLNFKTTDESLRKHFSEHVKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSLE 453
            +ARSLFVKNLNFKT DESLRKH +EH+KEG ILSVKV KHLKNGKNVSMGFGFVEFDS E
Sbjct: 619  QARSLFVKNLNFKTIDESLRKHLTEHMKEGSILSVKVLKHLKNGKNVSMGFGFVEFDSPE 678

Query: 454  TAKNVCTDLQGTVLDGHALILQLCHVKNDGKVQKKVEKDKSSTKLLVRNVAFEATEKDLR 633
            TA NVC DLQGTVLD HALILQ C+VKNDG+ QK +EKD+SSTKLL++NVAFEATEKDLR
Sbjct: 679  TATNVCKDLQGTVLDSHALILQPCNVKNDGQKQKTLEKDRSSTKLLIKNVAFEATEKDLR 738

Query: 634  QLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKEG 813
            +LFSPFGQIKSLRLPMKFG+HRGFAFVEYVTQQEAQNAL ALSSTHLYGRHLVIERAKE 
Sbjct: 739  RLFSPFGQIKSLRLPMKFGNHRGFAFVEYVTQQEAQNALKALSSTHLYGRHLVIERAKEA 798

Query: 814  ESLDELRARTAAQFS-EQNESQNATKLSKKRKQISFLDEGKMKFERLDD 957
            ESL+ELRARTAAQFS EQN  Q+A K SKKRKQ+ FLDEGKMKF R+ D
Sbjct: 799  ESLEELRARTAAQFSDEQNGFQSAMKFSKKRKQVDFLDEGKMKFGRMAD 847


>ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
          Length = 824

 Score =  370 bits (949), Expect = e-100
 Identities = 188/229 (82%), Positives = 206/229 (89%), Gaps = 1/229 (0%)
 Frame = +1

Query: 274  EARSLFVKNLNFKTTDESLRKHFSEHVKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSLE 453
            +ARSLFVKNLNFKT DESLRKHFSEH+KEGRILSVKV KHLKNGKNVSMGFGFVEFDS E
Sbjct: 596  QARSLFVKNLNFKTIDESLRKHFSEHMKEGRILSVKVLKHLKNGKNVSMGFGFVEFDSPE 655

Query: 454  TAKNVCTDLQGTVLDGHALILQLCHVKNDGKVQKKVEKDKSSTKLLVRNVAFEATEKDLR 633
            TA NVC DLQGTVLD HALILQ CHVKNDG+ QKK++KD+SSTKL ++NVAFEATEKDLR
Sbjct: 656  TATNVCRDLQGTVLDSHALILQPCHVKNDGQKQKKIDKDRSSTKLHIKNVAFEATEKDLR 715

Query: 634  QLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKEG 813
            +LFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEA+NA  AL+STHLYGRHL+IE AKE 
Sbjct: 716  RLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAKNAREALASTHLYGRHLLIEHAKED 775

Query: 814  ESLDELRARTAAQFS-EQNESQNATKLSKKRKQISFLDEGKMKFERLDD 957
            E+L+ELRA+TAAQFS EQN  Q+A KLSKKR Q+  LDEG MKF R+ D
Sbjct: 776  ETLEELRAKTAAQFSDEQNGFQSAMKLSKKRNQVDILDEGNMKFGRMAD 824


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  369 bits (946), Expect = e-99
 Identities = 186/228 (81%), Positives = 210/228 (92%)
 Frame = +1

Query: 274  EARSLFVKNLNFKTTDESLRKHFSEHVKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSLE 453
            E+RSLFVKNLNFKT+ ESLRKHFSEH+KEG+I SV+VK+HLKNGKNVSMGFGF+EFDS+E
Sbjct: 760  ESRSLFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVE 819

Query: 454  TAKNVCTDLQGTVLDGHALILQLCHVKNDGKVQKKVEKDKSSTKLLVRNVAFEATEKDLR 633
            TA NVC++LQGTVLDGHALILQLC  K D +V KKV+KDKSSTKL+VRNVAFEATEKDLR
Sbjct: 820  TAVNVCSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLR 879

Query: 634  QLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKEG 813
            QLFSPFGQIKSLRLPMKFGSHRGFAFVE+VT+QEAQNAL ALSSTHLYGRHLV+ERAKEG
Sbjct: 880  QLFSPFGQIKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVMERAKEG 939

Query: 814  ESLDELRARTAAQFSEQNESQNATKLSKKRKQISFLDEGKMKFERLDD 957
            ESL+ELRARTAAQF++    QN TKLS+KRK ++ LDEG +KFER+ D
Sbjct: 940  ESLEELRARTAAQFTD----QNPTKLSRKRKHMAALDEGTVKFERIAD 983


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  369 bits (946), Expect = e-99
 Identities = 186/228 (81%), Positives = 210/228 (92%)
 Frame = +1

Query: 274  EARSLFVKNLNFKTTDESLRKHFSEHVKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSLE 453
            E+RSLFVKNLNFKT+ ESLRKHFSEH+KEG+I SV+VK+HLKNGKNVSMGFGF+EFDS+E
Sbjct: 544  ESRSLFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVE 603

Query: 454  TAKNVCTDLQGTVLDGHALILQLCHVKNDGKVQKKVEKDKSSTKLLVRNVAFEATEKDLR 633
            TA NVC++LQGTVLDGHALILQLC  K D +V KKV+KDKSSTKL+VRNVAFEATEKDLR
Sbjct: 604  TAVNVCSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLR 663

Query: 634  QLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKEG 813
            QLFSPFGQIKSLRLPMKFGSHRGFAFVE+VT+QEAQNAL ALSSTHLYGRHLV+ERAKEG
Sbjct: 664  QLFSPFGQIKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVMERAKEG 723

Query: 814  ESLDELRARTAAQFSEQNESQNATKLSKKRKQISFLDEGKMKFERLDD 957
            ESL+ELRARTAAQF++    QN TKLS+KRK ++ LDEG +KFER+ D
Sbjct: 724  ESLEELRARTAAQFTD----QNPTKLSRKRKHMAALDEGTVKFERIAD 767


>ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
            distachyon]
          Length = 894

 Score =  348 bits (894), Expect = 1e-93
 Identities = 177/226 (78%), Positives = 197/226 (87%)
 Frame = +1

Query: 274  EARSLFVKNLNFKTTDESLRKHFSEHVKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSLE 453
            E+RSLFVKNLNFKTTDESL++HFS  +K G + S  VKKH+K GKNVSMGFGFVEFDS+E
Sbjct: 669  ESRSLFVKNLNFKTTDESLKQHFSTKLKIGSLKSATVKKHIKKGKNVSMGFGFVEFDSIE 728

Query: 454  TAKNVCTDLQGTVLDGHALILQLCHVKNDGKVQKKVEKDKSSTKLLVRNVAFEATEKDLR 633
            TA +VC DLQGT+LDGHALILQLCH K D K  KK EKDKSSTKLLVRNVAFEATEKDLR
Sbjct: 729  TATSVCKDLQGTLLDGHALILQLCHGKKDSKTAKKNEKDKSSTKLLVRNVAFEATEKDLR 788

Query: 634  QLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKEG 813
            QLFSPFGQ+KSLRLPMKFGSHRGFAFVE+VT+QEAQNAL AL+STHLYGRHLVIERAKEG
Sbjct: 789  QLFSPFGQLKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEG 848

Query: 814  ESLDELRARTAAQFSEQNESQNATKLSKKRKQISFLDEGKMKFERL 951
            E+L+ELRARTAAQF +  E     ++SKKRKQ S LDEG +KF R+
Sbjct: 849  ETLEELRARTAAQFVD--EQSGFQRMSKKRKQTSLLDEGSVKFSRI 892


Top