BLASTX nr result

ID: Glycyrrhiza24_contig00015735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015735
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...   434   e-119
ref|XP_003615149.1| F-box protein FBW2 [Medicago truncatula] gi|...   378   e-102
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...   356   9e-96
ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]    335   2e-89
emb|CBI19188.3| unnamed protein product [Vitis vinifera]              335   2e-89

>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
            gi|356508075|ref|XP_003522786.1| PREDICTED: F-box protein
            FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score =  434 bits (1117), Expect = e-119
 Identities = 218/322 (67%), Positives = 246/322 (76%)
 Frame = +2

Query: 269  MEVAPDFRSWDELIPDTLGVIFSNLSLKERLTVIPRVCKSWAKAINGPYCWQEIDIDEWS 448
            ME A +FRSW ELIPD LGVIF+NLSL+ER+TVIPRVCKSWA A+ GPYCWQEIDI +WS
Sbjct: 1    MEEACEFRSWAELIPDALGVIFTNLSLQERVTVIPRVCKSWANAVTGPYCWQEIDIKDWS 60

Query: 449  SRCSEPGHLERMLEMLITRSSGSLRKLCVSGLQSGRIFTFLAENAGSLQTLRLPRCNMND 628
            +RC +P  L+R+LEMLITRSSGSLRKL VSGLQ+  IFTF+AENA SL TLRLPR +MND
Sbjct: 61   NRC-QPDQLDRLLEMLITRSSGSLRKLSVSGLQTESIFTFIAENACSLHTLRLPRSSMND 119

Query: 629  SVVEQVTRRLSLISFLDVSYCIKIGTHALEIIGKNCKLLEVLCRNMHPLDTSGKPLEDAE 808
            S+VEQ+  RLS+ISFLDVSYCIKIG +ALE+IGKNCKLLE LCRNMHPLDT+ KP +D E
Sbjct: 120  SIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQDDE 179

Query: 809  AFAIASTMPKLKHLEMAYHLITDAGVLQILSFCPKLEILDMRGCWGVQLDNMFVKQNFPK 988
            A+AIASTMPKLKHLEMAYHLI+ +GVLQIL+ CPKLE LD RGCWGV LD+MF+KQ FPK
Sbjct: 180  AYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPK 239

Query: 989  LKVLGPQVLGYYERXXXXXXXXXXXXXXXLAWEFEAGGVXXXXXXXXXXXXXXXXXXXXX 1168
            LKVLGP VL  YE                LAW+F AGG+                     
Sbjct: 240  LKVLGPFVLDTYESDGWDDFSDVSDSSEYLAWDFVAGGMEEYYVDDSDSYDGMWDDEGRL 299

Query: 1169 XXXXFRVYEGIEDAGMYWPPSP 1234
                F  YEGIEDAGMYWPPSP
Sbjct: 300  DELQFGFYEGIEDAGMYWPPSP 321


>ref|XP_003615149.1| F-box protein FBW2 [Medicago truncatula] gi|217072396|gb|ACJ84558.1|
            unknown [Medicago truncatula] gi|355516484|gb|AES98107.1|
            F-box protein FBW2 [Medicago truncatula]
            gi|388514351|gb|AFK45237.1| unknown [Medicago truncatula]
          Length = 316

 Score =  378 bits (970), Expect = e-102
 Identities = 196/323 (60%), Positives = 231/323 (71%), Gaps = 1/323 (0%)
 Frame = +2

Query: 269  MEVAPDFRSWDELIPDTLGVIFSNLSLKERLTVIPRVCKSWAKAINGPYCWQEIDIDEWS 448
            M V+ D R+WDELIPDTLG+IF+ LSL ER TVIPRVCKSWA A+NGPYCWQEIDI +W 
Sbjct: 1    MAVSSDIRAWDELIPDTLGLIFTKLSLCERFTVIPRVCKSWASAVNGPYCWQEIDITDWC 60

Query: 449  SRCSEPGHLERMLEMLITRSSGSLRKLCVSGLQSGRIFTFLAENAGSLQTLRLPRCNMND 628
            S  SEP  +ERM++MLITRSSGSLRKL VSG+Q+ R+FTF+A+NAGSLQ LRL RCN+N 
Sbjct: 61   SY-SEPPQVERMVQMLITRSSGSLRKLSVSGIQTERVFTFIADNAGSLQNLRLQRCNINT 119

Query: 629  SVVEQVTRRLSLISFLDVSYCIKIGTHALEIIGKNCKLLEVLCRNMHPLDTSGKPLEDAE 808
              VEQ+T +LS IS LD+SYC+KI +  +E IGKN K LEV CRNMHP++TSGKP EDAE
Sbjct: 120  FAVEQMTGKLSKISILDLSYCLKICSSDIETIGKNLKHLEVFCRNMHPVETSGKPSEDAE 179

Query: 809  AFAIASTMPKLKHLEMAYHLITDAGVLQILSFCPKLEILDMRGCWGVQLDNMFVKQNFPK 988
            A AIASTMPKLK LEMAY+L+T  GV +ILS CPKLEILD+RGCWGV+LD + V+Q FPK
Sbjct: 180  ALAIASTMPKLKRLEMAYNLVTSEGVYKILSSCPKLEILDLRGCWGVKLDTVSVQQKFPK 239

Query: 989  LKVLGPQVLGYYERXXXXXXXXXXXXXXXLAWEFEAGGVXXXXXXXXXXXXXXXXXXXXX 1168
            L VLGPQV+GYYE                   E++   +                     
Sbjct: 240  LAVLGPQVIGYYEMLEDCSDISDSSDS-----EYDDSDM-DEYDYDDDSDDGIWYHLGGI 293

Query: 1169 XXXXFRVYE-GIEDAGMYWPPSP 1234
                FR Y  G+EDA MYWPPSP
Sbjct: 294  EELEFRAYAGGVEDAAMYWPPSP 316


>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  356 bits (913), Expect = 9e-96
 Identities = 186/325 (57%), Positives = 224/325 (68%), Gaps = 3/325 (0%)
 Frame = +2

Query: 269  MEVAPDFRSWDELIPDTLGVIFSNLSLKERLTVIPRVCKSWAKAINGPYCWQEIDIDEWS 448
            ME   ++R WDELIPD LG+IF NLSL+E LT++PRVCKSW++A++GPYCWQEI+I+EWS
Sbjct: 1    MEEGDEYRRWDELIPDALGLIFRNLSLQEILTMVPRVCKSWSRAVSGPYCWQEINIEEWS 60

Query: 449  SRCSEPGHLERMLEMLITRSSGSLRKLCVSGLQSGRIFTFLAENAGSLQTLRLPRCNMND 628
            +RC  P HL+RML+MLITRS GSLRKLCVSGL +   F+FLA++AGSLQTLR+PR ++ D
Sbjct: 61   TRC-HPDHLDRMLQMLITRSCGSLRKLCVSGLHNDTNFSFLADHAGSLQTLRIPRSDIGD 119

Query: 629  SVVEQVTRRLSLISFLDVSYCIKIGTHALEIIGKNCKLLEVLCRNMHPLDTSGKPLEDAE 808
            S+VEQ+  RLS ++FLDVSYC KI   ALE IGK+CKLL  LCRNMHPLDT G   +D E
Sbjct: 120  SIVEQIAGRLSTVTFLDVSYCNKISGRALEAIGKHCKLLVGLCRNMHPLDTEGLEAQDDE 179

Query: 809  AFAIASTMPKLKHLEMAYHLITDAGVLQILSFCPKLEILDMRGCWGVQLDNMFVKQNFPK 988
            A+AIA+TMPKLK LEMAYHL++   +LQILS C  LE +D+RGCW V LDN F K+ F K
Sbjct: 180  AYAIATTMPKLKRLEMAYHLVSTESLLQILSSCTNLEFMDLRGCWNVNLDNKFFKEKFQK 239

Query: 989  LKVLGPQVL-GYYE-RXXXXXXXXXXXXXXXLAWEFEAGGVXXXXXXXXXXXXXXXXXXX 1162
            L VLGP V+  YYE                 LAW F AG                     
Sbjct: 240  LTVLGPLVMEDYYEANDWEEDCSEYSDDSDYLAWGFLAG--DGGDYDDDESYDEMWDDEG 297

Query: 1163 XXXXXXFRVYEGIEDAGMY-WPPSP 1234
                   R YEG  DAG+Y WPPSP
Sbjct: 298  RLEELELRFYEG-ADAGLYGWPPSP 321


>ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]
          Length = 296

 Score =  335 bits (859), Expect = 2e-89
 Identities = 164/251 (65%), Positives = 201/251 (80%)
 Frame = +2

Query: 269  MEVAPDFRSWDELIPDTLGVIFSNLSLKERLTVIPRVCKSWAKAINGPYCWQEIDIDEWS 448
            ME   D R WDELIPD LG+IF NLSL+E LTVIPRVCKSW +A+ GPYCWQEIDI EWS
Sbjct: 1    MEEESDIRRWDELIPDALGLIFRNLSLREILTVIPRVCKSWDEAVKGPYCWQEIDIGEWS 60

Query: 449  SRCSEPGHLERMLEMLITRSSGSLRKLCVSGLQSGRIFTFLAENAGSLQTLRLPRCNMND 628
             +   P HL+RMLE+LI RS GSLRKLCV GLQ+ R+ +F+AE+AGSLQTL+L R  ++D
Sbjct: 61   DQW--PEHLDRMLEILIRRSCGSLRKLCVFGLQNDRLLSFIAEHAGSLQTLQLIRSEISD 118

Query: 629  SVVEQVTRRLSLISFLDVSYCIKIGTHALEIIGKNCKLLEVLCRNMHPLDTSGKPLEDAE 808
            S+VE++  R S ++FLDVS C K+G+ ALE IGKNCK L  LCRNMHPL T+GK  +D E
Sbjct: 119  SLVEEIAGRFSTLTFLDVSCCNKMGSRALEAIGKNCKSLVGLCRNMHPLTTAGKLSQDEE 178

Query: 809  AFAIASTMPKLKHLEMAYHLITDAGVLQILSFCPKLEILDMRGCWGVQLDNMFVKQNFPK 988
            A AIA+TMPKLKHLEMAYHL++   VL+ILS CP+LE+LD+RGCW V+L+  F+K+ FPK
Sbjct: 179  AHAIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPK 238

Query: 989  LKVLGPQVLGY 1021
            L+VLGP V+ Y
Sbjct: 239  LRVLGPVVVDY 249


>emb|CBI19188.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  335 bits (859), Expect = 2e-89
 Identities = 164/251 (65%), Positives = 201/251 (80%)
 Frame = +2

Query: 269  MEVAPDFRSWDELIPDTLGVIFSNLSLKERLTVIPRVCKSWAKAINGPYCWQEIDIDEWS 448
            ME   D R WDELIPD LG+IF NLSL+E LTVIPRVCKSW +A+ GPYCWQEIDI EWS
Sbjct: 1    MEEESDIRRWDELIPDALGLIFRNLSLREILTVIPRVCKSWDEAVKGPYCWQEIDIGEWS 60

Query: 449  SRCSEPGHLERMLEMLITRSSGSLRKLCVSGLQSGRIFTFLAENAGSLQTLRLPRCNMND 628
             +   P HL+RMLE+LI RS GSLRKLCV GLQ+ R+ +F+AE+AGSLQTL+L R  ++D
Sbjct: 61   DQW--PEHLDRMLEILIRRSCGSLRKLCVFGLQNDRLLSFIAEHAGSLQTLQLIRSEISD 118

Query: 629  SVVEQVTRRLSLISFLDVSYCIKIGTHALEIIGKNCKLLEVLCRNMHPLDTSGKPLEDAE 808
            S+VE++  R S ++FLDVS C K+G+ ALE IGKNCK L  LCRNMHPL T+GK  +D E
Sbjct: 119  SLVEEIAGRFSTLTFLDVSCCNKMGSRALEAIGKNCKSLVGLCRNMHPLTTAGKLSQDEE 178

Query: 809  AFAIASTMPKLKHLEMAYHLITDAGVLQILSFCPKLEILDMRGCWGVQLDNMFVKQNFPK 988
            A AIA+TMPKLKHLEMAYHL++   VL+ILS CP+LE+LD+RGCW V+L+  F+K+ FPK
Sbjct: 179  AHAIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPK 238

Query: 989  LKVLGPQVLGY 1021
            L+VLGP V+ Y
Sbjct: 239  LRVLGPVVVDY 249


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