BLASTX nr result

ID: Glycyrrhiza24_contig00015705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015705
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34661.1| unknown [Lotus japonicus]                              164   7e-39
ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   144   8e-33
ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyra...   143   2e-32
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...   142   3e-32
gb|AAM63145.1| unknown [Arabidopsis thaliana]                         142   3e-32

>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/123 (63%), Positives = 87/123 (70%)
 Frame = +2

Query: 2   HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLQQLRHDPEVAHLLSNIKKYN 181
           HWFCANCIM+VW H S +QPCKCPLCRRPITLLVPT+      R +PEVAH+LS I+ YN
Sbjct: 29  HWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVPTEQDSASHRQEPEVAHVLSQIQTYN 88

Query: 182 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXXPHRSLPLVIRARVFIAMILSAVYVFSPIDI 361
           R FGA SSG                     P RSLPLVIRARV+IAMI+SA+YVFSPIDI
Sbjct: 89  RFFGARSSGPLQRMLDLPFLLRRLAREFLDPQRSLPLVIRARVYIAMIISAIYVFSPIDI 148

Query: 362 IPE 370
           IPE
Sbjct: 149 IPE 151


>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  144 bits (363), Expect = 8e-33
 Identities = 69/123 (56%), Positives = 85/123 (69%)
 Frame = +2

Query: 2   HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLQQLRHDPEVAHLLSNIKKYN 181
           HWFC +CIM+VW H S +QPCKCPLCRR ITLLVP + SL++ R DP+VA +L  I++YN
Sbjct: 27  HWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASLRE-RSDPDVAEVLGKIERYN 85

Query: 182 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXXPHRSLPLVIRARVFIAMILSAVYVFSPIDI 361
            +FG  +SG                     P RSLPLVIRARV+IA++LSA+YV SPIDI
Sbjct: 86  HLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSLPLVIRARVYIAVVLSAIYVISPIDI 145

Query: 362 IPE 370
           IPE
Sbjct: 146 IPE 148


>ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333261|gb|EFH63679.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/123 (54%), Positives = 86/123 (69%)
 Frame = +2

Query: 2   HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLQQLRHDPEVAHLLSNIKKYN 181
           HWFC NCIM VW+H S +QPCKCPLCRRPI+LLVP++++++  R+D  VA +L N++ YN
Sbjct: 27  HWFCGNCIMQVWRHGSTLQPCKCPLCRRPISLLVPSEDTIRD-RNDSTVADVLGNLETYN 85

Query: 182 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXXPHRSLPLVIRARVFIAMILSAVYVFSPIDI 361
           R+FG  S+                      P R+LPLVIRARV+IAMILSA+Y+ SPIDI
Sbjct: 86  RLFGGRSTSLVQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIAMILSAIYIISPIDI 145

Query: 362 IPE 370
           IPE
Sbjct: 146 IPE 148


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/123 (53%), Positives = 87/123 (70%)
 Frame = +2

Query: 2   HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLQQLRHDPEVAHLLSNIKKYN 181
           HWFC NCIM+VW+H S ++PCKCPLCRRPI+LLVP++ +++  R+D  V+ +L +++ YN
Sbjct: 27  HWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRS-RNDATVSEVLHDVETYN 85

Query: 182 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXXPHRSLPLVIRARVFIAMILSAVYVFSPIDI 361
           RVFG  SSG                     P R+LPLVIRARV+IA+ILSA+Y+ SPIDI
Sbjct: 86  RVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDI 145

Query: 362 IPE 370
           IPE
Sbjct: 146 IPE 148


>gb|AAM63145.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/123 (53%), Positives = 87/123 (70%)
 Frame = +2

Query: 2   HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLQQLRHDPEVAHLLSNIKKYN 181
           HWFC NCIM+VW+H S ++PCKCPLCRRPI+LLVP++ +++  R+D  V+ +L +++ YN
Sbjct: 27  HWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRS-RNDATVSEVLHDVETYN 85

Query: 182 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXXPHRSLPLVIRARVFIAMILSAVYVFSPIDI 361
           RVFG  SSG                     P R+LPLVIRARV+IA+ILSA+Y+ SPIDI
Sbjct: 86  RVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDI 145

Query: 362 IPE 370
           IPE
Sbjct: 146 IPE 148


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