BLASTX nr result
ID: Glycyrrhiza24_contig00015698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00015698 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3... 177 8e-43 ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] 175 4e-42 ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795... 171 7e-41 ref|NP_567858.1| transducin/WD40 domain-containing protein [Arab... 136 2e-30 gb|AAM63718.1| unknown [Arabidopsis thaliana] 136 2e-30 >ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1| Nucleoporin Nup43 [Medicago truncatula] Length = 351 Score = 177 bits (449), Expect = 8e-43 Identities = 85/89 (95%), Positives = 86/89 (96%) Frame = -1 Query: 269 GAGDGAGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPAMICSEDGILGVIEQGEEPIE 90 GAGDGAGNTAVQSISESEVWEVQYDRCIK NTSSTRILPAMICSEDGILGVIEQGEEPIE Sbjct: 256 GAGDGAGNTAVQSISESEVWEVQYDRCIKSNTSSTRILPAMICSEDGILGVIEQGEEPIE 315 Query: 89 LLAEPCAINSFDIDRHNPSDVICSFEWEA 3 LLAEPCAINSFDIDRHNP DVICS EWE+ Sbjct: 316 LLAEPCAINSFDIDRHNPLDVICSLEWES 344 >ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] Length = 347 Score = 175 bits (443), Expect = 4e-42 Identities = 86/90 (95%), Positives = 87/90 (96%), Gaps = 1/90 (1%) Frame = -1 Query: 269 GAGDGAG-NTAVQSISESEVWEVQYDRCIKPNTSSTRILPAMICSEDGILGVIEQGEEPI 93 GAG GAG NTAVQSISESEVWEVQYDRCIKPNTSSTRILP+MICSEDGILGVIEQGEEPI Sbjct: 251 GAGAGAGGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPSMICSEDGILGVIEQGEEPI 310 Query: 92 ELLAEPCAINSFDIDRHNPSDVICSFEWEA 3 ELLAEPCAINSFDIDRHNPSDVICS EWEA Sbjct: 311 ELLAEPCAINSFDIDRHNPSDVICSLEWEA 340 >ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max] Length = 346 Score = 171 bits (432), Expect = 7e-41 Identities = 82/88 (93%), Positives = 84/88 (95%) Frame = -1 Query: 266 AGDGAGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPAMICSEDGILGVIEQGEEPIEL 87 +G GA NTAVQSISESEVWEVQYDRCIK NTSSTRILP+MICSEDGILGVIEQGEEPIEL Sbjct: 252 SGAGAANTAVQSISESEVWEVQYDRCIKSNTSSTRILPSMICSEDGILGVIEQGEEPIEL 311 Query: 86 LAEPCAINSFDIDRHNPSDVICSFEWEA 3 LAEPCAINSFDIDRHNPSDVICS EWEA Sbjct: 312 LAEPCAINSFDIDRHNPSDVICSLEWEA 339 >ref|NP_567858.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|90093296|gb|ABD85161.1| At4g30840 [Arabidopsis thaliana] gi|332660417|gb|AEE85817.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 361 Score = 136 bits (343), Expect = 2e-30 Identities = 65/88 (73%), Positives = 70/88 (79%) Frame = -1 Query: 266 AGDGAGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPAMICSEDGILGVIEQGEEPIEL 87 +G GA +SESEVWEVQYD K N SS+RILP M CSEDGILG+IEQGEEPIEL Sbjct: 267 SGVGASENINNPLSESEVWEVQYDSYTKSNVSSSRILPVMTCSEDGILGIIEQGEEPIEL 326 Query: 86 LAEPCAINSFDIDRHNPSDVICSFEWEA 3 LAEPCAINSFDIDR NP DVICS EWE+ Sbjct: 327 LAEPCAINSFDIDRQNPQDVICSLEWES 354 >gb|AAM63718.1| unknown [Arabidopsis thaliana] Length = 358 Score = 136 bits (343), Expect = 2e-30 Identities = 65/88 (73%), Positives = 70/88 (79%) Frame = -1 Query: 266 AGDGAGNTAVQSISESEVWEVQYDRCIKPNTSSTRILPAMICSEDGILGVIEQGEEPIEL 87 +G GA +SESEVWEVQYD K N SS+RILP M CSEDGILG+IEQGEEPIEL Sbjct: 264 SGVGASENINNPLSESEVWEVQYDSYTKSNVSSSRILPVMTCSEDGILGIIEQGEEPIEL 323 Query: 86 LAEPCAINSFDIDRHNPSDVICSFEWEA 3 LAEPCAINSFDIDR NP DVICS EWE+ Sbjct: 324 LAEPCAINSFDIDRQNPQDVICSLEWES 351