BLASTX nr result

ID: Glycyrrhiza24_contig00015697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015697
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap...   166   6e-39
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266...   166   8e-39
ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING...   154   3e-35
gb|ACU15078.1| unknown [Glycine max]                                  130   4e-28
ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229...   105   2e-20

>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
            putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
            splicing factor, arginine/serine-rich 2,rnap interacting
            protein, putative [Ricinus communis]
          Length = 632

 Score =  166 bits (420), Expect = 6e-39
 Identities = 116/322 (36%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
 Frame = -1

Query: 859  NVCRPPKHGVFSSSRDVKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXX 680
            N+ RPPK GVF S R V VP RDQVYH +GN T  P   YA+V+CSIC    DE+     
Sbjct: 94   NIHRPPKDGVFPSERLVNVPKRDQVYHLFGNTTVEPFDPYAQVQCSICHTAEDESLLLLC 153

Query: 679  XXXDTASHTYCVGLGYTVPEGDWFCHDCAISRETNAIANEESDQQNVVPT---------- 530
               D+A+HTYCVGLG+TVPE DWFCHDCA+SR  +   N + D+ N+  T          
Sbjct: 154  DLCDSAAHTYCVGLGFTVPECDWFCHDCAVSRTEH--ENFQKDEDNITQTLSVKSEVVLA 211

Query: 529  AEPGATILSIVRGTS-----------------SQVVRRPRA--------SPLRQNHSSSS 425
            AEP   + S  + TS                 +Q + RPRA        S    N +   
Sbjct: 212  AEPYVAVNS--QNTSENYNAGAENGANFCQSDNQSIGRPRARSSQVPSPSERLSNLADDM 269

Query: 424  VNPSLDTVSRFKGKNHVSGVQRAQRN-------VQVLRENWTALRSGSLKFHCNXXXXXX 266
              P   T     G+       R  R        V+ LRENW ALRSGSL+F  +      
Sbjct: 270  SQPRETTTRTGPGQETPQSDARTLRRCRDVHSYVRALRENWDALRSGSLRFSSSSVESCS 329

Query: 265  XXXXXXXXXSLPCGKLDVSHSRASTGLQQSTVLGGHSSNMSNDKGLKDVDKAWKMMDRAK 86
                      +       SH+ +ST  QQ T+  G     + D+   D  KAWKMM +AK
Sbjct: 330  RSIAKCYTPVVTHESSGQSHTMSSTSGQQLTINDGLPGTFAQDRHSHDAKKAWKMMAKAK 389

Query: 85   MMQRTHRTGKIPQGVDDPSSSG 20
                      I QG  +PS+ G
Sbjct: 390  ---------SIHQGSKNPSTKG 402


>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
           gi|297734114|emb|CBI15361.3| unnamed protein product
           [Vitis vinifera]
          Length = 648

 Score =  166 bits (419), Expect = 8e-39
 Identities = 109/287 (37%), Positives = 144/287 (50%), Gaps = 19/287 (6%)
 Frame = -1

Query: 850 RPPKHGVFSSSRDVKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXXXXX 671
           RPPK GVF S R V VP+RDQ YH +GN+T+GP   YAEV C IC    DE+        
Sbjct: 102 RPPKPGVFPSERIVNVPVRDQAYHHFGNVTTGPSDPYAEVDCGICHGTADESFLLICDLC 161

Query: 670 DTASHTYCVGLGYTVPEGDWFCHDCAISR------ETNAIANEESDQQNVV--PTAEPGA 515
           D+A+HTYCVGLG+TVPEGDWFCHDC +SR      E +A+ ++ ++ +N    P+AE   
Sbjct: 162 DSAAHTYCVGLGHTVPEGDWFCHDCTVSRAEHANGEIDAVFDDRNNFRNFYRKPSAETHV 221

Query: 514 TILSIVRGTSSQVVRRP----------RASPLRQNHSSSSVNPSLDTVSRFKGKNHVSGV 365
           +I  IV    ++   RP           +SP+  N  + +VN S    S       +   
Sbjct: 222 SICDIVAEPYTREDERPPSIGSSHPNRPSSPIALNSENFAVNNS----SSMSVARTLLRC 277

Query: 364 QRAQRNVQVLRENWTALRSGSLKFHCNXXXXXXXXXXXXXXXSLPCGKLDVSHSRASTGL 185
           +    ++Q LRENW ALRSGS+ F                        L  S   +S   
Sbjct: 278 RNVNAHIQALRENWNALRSGSMTF---------------------SSILGDSGGESS--- 313

Query: 184 QQSTVLGGHSSNMSNDKGLKDVDKAWKMMDRAKMMQRT-HRTGKIPQ 47
            Q   +G       N+    D +KAWKMMD+AK +QR   RTG I Q
Sbjct: 314 -QKYNVGASCPKQDNNACSYDTEKAWKMMDKAKSIQRACERTGIIHQ 359


>ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
           domain-containing protein 1-like [Glycine max]
          Length = 182

 Score =  154 bits (388), Expect = 3e-35
 Identities = 72/104 (69%), Positives = 79/104 (75%)
 Frame = -1

Query: 859 NVCRPPKHGVFSSSRDVKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXX 680
           NV R P HGVFSSSRDVKVP RDQ+YHP+GNM +GP  SY E KC +C  GTDE+     
Sbjct: 74  NVRRLPMHGVFSSSRDVKVPHRDQLYHPHGNMATGPADSYTETKCGVCHAGTDEHLLLLC 133

Query: 679 XXXDTASHTYCVGLGYTVPEGDWFCHDCAISRETNAIANEESDQ 548
              DTASHTYCVGLGYTVPEGDWFCHDCAISR+ N    E+SDQ
Sbjct: 134 DLCDTASHTYCVGLGYTVPEGDWFCHDCAISRKIN--IKEDSDQ 175


>gb|ACU15078.1| unknown [Glycine max]
          Length = 125

 Score =  130 bits (327), Expect = 4e-28
 Identities = 81/136 (59%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
 Frame = -2

Query: 837 MASFLPLGTLRSLFVTRFIILMEI*QVVRLVLMQRSNAVSVKLGQMRIFYYYAIFVILLH 658
           MASFLP GTLR      FIILMEI Q+VRL+L+ + N V V L QM IFYY+ I+VILL 
Sbjct: 1   MASFLPPGTLR------FIILMEIWQLVRLILILKPNVVFVMLEQMSIFYYFVIYVILLR 54

Query: 657 IHTALAWAILFLKVIGFVMIVLFPGRPMPLLMKNQTNKMLCLQLSLAQPS*V-----S*E 493
            HT LAWAILFL VIGFV IVLFPGR  P+ MKNQTNK        A+PS          
Sbjct: 55  THTVLAWAILFLMVIGFVTIVLFPGR--PISMKNQTNKNFA---PTAEPSVTINIFDIVR 109

Query: 492 EQAARWLEDLGHLLYD 445
           E AA WL D GHLLY+
Sbjct: 110 ETAAGWLIDQGHLLYN 125


>ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus]
          Length = 398

 Score =  105 bits (261), Expect = 2e-20
 Identities = 80/259 (30%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
 Frame = -1

Query: 817 RDVKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXXXXXDTASHTYCVGL 638
           R V +P+R+Q     G+   G    YAE  C++C+   DE         D+A+HT+CVGL
Sbjct: 116 RIVNIPMRNQDQSASGSARIGD--PYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVGL 173

Query: 637 GYTVPEGDWFCHDCAISR--ETNAIANEESDQQNVVPTAEPGATILSIVRGTSSQVVR-R 467
           G  VPEGDW+CHDC I+R   T+   +    +QN   T EP   I  IV+ +S+Q V   
Sbjct: 174 GANVPEGDWYCHDCTIARAQHTDTELDTSFIKQNQTTTVEPRIAISDIVKESSAQTVSIT 233

Query: 466 PRASPLRQNHSSSSVNPS------LDTVSRFKGKNHVSGVQRAQR------NVQVLRENW 323
            R + L  N    S+ PS        ++    GK   +  +   R       ++ LR+NW
Sbjct: 234 RRGALLHSNREPPSIVPSSRRSVAQKSLPSRGGKAAGTSARTLHRCRNIHSYIRALRDNW 293

Query: 322 TALRSGSLKFHCNXXXXXXXXXXXXXXXSLPCGKLDVSHSRASTGLQQSTVLGGHSSNMS 143
            A+R GSL+F  +                        +   A +   Q+T L   + N  
Sbjct: 294 DAVRKGSLRFPASSSSTYCGNSSKRDTGGAELINKQTNQPHAIS--LQATTLPESNGNSC 351

Query: 142 NDKGLKDVDKAWKMMDRAK 86
                 DV+KAW+MM+ AK
Sbjct: 352 ------DVEKAWRMMEIAK 364


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