BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015675
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF45348.1| nucleoporin [Lotus japonicus]                         564   e-158
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   518   e-144
ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...   518   e-144
ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   477   e-132
ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121

>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score =  564 bits (1454), Expect = e-158
 Identities = 280/353 (79%), Positives = 300/353 (84%), Gaps = 2/353 (0%)
 Frame = +2

Query: 44   MSPDTVGNGALVQFSGETRDSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSG-S 220
            M  DTVGNG LV FSGE  DS+ VYPL+HGL  P+SRVAISWSRGNSLRVSLFAEPS  S
Sbjct: 1    MPSDTVGNGVLVPFSGEGSDSVAVYPLNHGLSLPISRVAISWSRGNSLRVSLFAEPSATS 60

Query: 221  PDAP-EGAKVVEVKLSDGDPEITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXXYHL 397
            PD+   GAKVVEVKLS  DPEI+D+NWRRIAYGSV PF                   YH+
Sbjct: 61   PDSQASGAKVVEVKLSGEDPEISDSNWRRIAYGSVTPFALLQSRRSSLAALSKSPSPYHV 120

Query: 398  DWWEHVLQYSKDISSLLGDPKSRPSPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQS 577
            DWWEHVL+YSKDI+SLLG PK  P PIIED +AI  + EEPTCLKAAWEL+E+FYVDK+S
Sbjct: 121  DWWEHVLEYSKDIASLLGGPKLSPGPIIEDPNAIATKCEEPTCLKAAWELLEMFYVDKRS 180

Query: 578  QAWLPERLVDWLADYDSLFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVG 757
            QAWLPERLVDWLAD+DSLFTST ETIHGKLV+FQK+LVNIQVIEDDPRYWE MSSALSVG
Sbjct: 181  QAWLPERLVDWLADFDSLFTSTHETIHGKLVNFQKELVNIQVIEDDPRYWEVMSSALSVG 240

Query: 758  WLDIVVKMLRLHGSYQLDQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKP 937
            WLDIVVKMLRLHGSYQLDQLS RE ENGLVE VAVLISKMPRLRPES+V  LGECFKSKP
Sbjct: 241  WLDIVVKMLRLHGSYQLDQLSSRERENGLVEVVAVLISKMPRLRPESAVENLGECFKSKP 300

Query: 938  DFIKAWEKWRSQITKLDCSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATC 1096
            DFIKAWEKWRSQITKLDCSPFWIQCDN+QT +GLRNLLQIMLGNTE LCTATC
Sbjct: 301  DFIKAWEKWRSQITKLDCSPFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATC 353


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  518 bits (1333), Expect = e-144
 Identities = 263/351 (74%), Positives = 288/351 (82%)
 Frame = +2

Query: 44   MSPDTVGNGALVQFSGETRDSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGSP 223
            M  DTVGN ALV F+G++  +  VYPLHHGL  P+SR++ISW+RG+SLR+SLFA  +   
Sbjct: 1    MPSDTVGNVALVPFTGDSPPA--VYPLHHGLAPPISRLSISWARGSSLRLSLFAGAA--- 55

Query: 224  DAPEGAKVVEVKLSDGDPEITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXXYHLDW 403
                 AKVVEVKL+  D EI DA+WRRIAYGSVAPF                   Y  DW
Sbjct: 56   -----AKVVEVKLAGEDSEIPDAHWRRIAYGSVAPFALLQSRRSSLSALLKTPSPYRSDW 110

Query: 404  WEHVLQYSKDISSLLGDPKSRPSPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQA 583
            WEHVLQYSK+I SLLG PK   SPIIED + I KR EEPT LKAAWEL+EIFYVDKQSQA
Sbjct: 111  WEHVLQYSKEIGSLLGGPKLPASPIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQSQA 170

Query: 584  WLPERLVDWLADYDSLFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWL 763
            WLPERLVDWLADY SLFTST ETIHGKLVDFQK+LVNIQVIE+DPRYW+ +SSALSVGWL
Sbjct: 171  WLPERLVDWLADYASLFTSTHETIHGKLVDFQKELVNIQVIEEDPRYWDLLSSALSVGWL 230

Query: 764  DIVVKMLRLHGSYQLDQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDF 943
            DIVVKMLRLHGSYQLDQLS RE+ENGLVEAVAVLISKMPR+RPE SVG+LGEC+KSKPDF
Sbjct: 231  DIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRMRPE-SVGKLGECYKSKPDF 289

Query: 944  IKAWEKWRSQITKLDCSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATC 1096
            IKAWEKWRSQITKLDCS FWIQCDN+QTREGLRNLLQIMLGNTE LC ATC
Sbjct: 290  IKAWEKWRSQITKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATC 340


>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
            gi|355477434|gb|AES58637.1| Nuclear pore complex protein
            Nup85 [Medicago truncatula]
          Length = 919

 Score =  518 bits (1333), Expect = e-144
 Identities = 272/399 (68%), Positives = 292/399 (73%), Gaps = 48/399 (12%)
 Frame = +2

Query: 44   MSPDTVGNGALVQFSGETR-DSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGS 220
            MSP+TV NG L+ FSGET  DSL +YPLHH L RPVSR+AISWSRGNSLRVSLFAEPS +
Sbjct: 1    MSPNTVDNGTLIPFSGETNNDSLAIYPLHHTLTRPVSRLAISWSRGNSLRVSLFAEPSQT 60

Query: 221  PDAPEGAKVVEVKLSDGDPEITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXXYHLD 400
             DA +GAKV+EVKL  GDPEI DA+WRRIAYGSVAPF                   Y LD
Sbjct: 61   SDAGDGAKVIEVKLGGGDPEIDDADWRRIAYGSVAPFALLQSRRSAISNMSKSPSTYQLD 120

Query: 401  ---------------------------------W--------------WEHVLQYSKDIS 439
                                             W              WEHVLQYSK+I+
Sbjct: 121  CTNKNTEHYTDTWTQKDIDINELDKYMMYDRTLWRHLIHVACPTSGIKWEHVLQYSKEIT 180

Query: 440  SLLGDPKSRPSPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLAD 619
            SLL  PK  PSPII+D + IVK++EEPTCLKAAWELMEIFYVDKQ  +           D
Sbjct: 181  SLLAGPKLGPSPIIDDPNEIVKKNEEPTCLKAAWELMEIFYVDKQISSM----------D 230

Query: 620  YDSLFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGS 799
            YDSLFTSTQETIHGKLVDFQ DLVNIQVIEDDPRYWE MSSALSVGWLDIVVKMLRLHGS
Sbjct: 231  YDSLFTSTQETIHGKLVDFQNDLVNIQVIEDDPRYWEVMSSALSVGWLDIVVKMLRLHGS 290

Query: 800  YQLDQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQIT 979
            YQLDQLS RE+ENGLVEAVAVLISKMPRLRPES+ G LGECFKSKPDFIKAWEKWRSQIT
Sbjct: 291  YQLDQLSNRELENGLVEAVAVLISKMPRLRPESAAGNLGECFKSKPDFIKAWEKWRSQIT 350

Query: 980  KLDCSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATC 1096
            KLDCSPFWIQCDN+QTR GLRNLLQ+MLGNTE LCTA+C
Sbjct: 351  KLDCSPFWIQCDNQQTRVGLRNLLQVMLGNTESLCTASC 389


>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
            gi|296081842|emb|CBI20847.3| unnamed protein product
            [Vitis vinifera]
          Length = 715

 Score =  477 bits (1227), Expect = e-132
 Identities = 231/348 (66%), Positives = 274/348 (78%), Gaps = 6/348 (1%)
 Frame = +2

Query: 71   ALVQFSGETRDSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAE---PSGSPDAPEGA 241
            ALV  S E   S VVYPLHHGL+ P+SR++ISWSRGN+LRVS+F E    S   D   G 
Sbjct: 11   ALVPLSPEAHVS-VVYPLHHGLKPPISRLSISWSRGNALRVSVFRELPAESSDSDGEAGG 69

Query: 242  KVVEVKLSDGDPEITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXX---YHLDWWEH 412
            KVV+VKL   D E+ DA WRRIAYGSV+PF                      YH DWWE+
Sbjct: 70   KVVQVKLGVADGEVDDAQWRRIAYGSVSPFALLQSRRNSVLALSKMSMSSSPYHPDWWEY 129

Query: 413  VLQYSKDISSLLGDPKSRPSPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLP 592
            V++YSKDISSLL + KS P+ +I+D   ++K+ EEPTCLKAAW L+EIFY DK+SQAWLP
Sbjct: 130  VMEYSKDISSLLDNAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGLLEIFYADKESQAWLP 189

Query: 593  ERLVDWLADYDSLFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIV 772
            ER+VDWLADYD LF+ TQ T+H KLV+FQK++V +QVIEDDPRYWE ++SAL+VGWL+IV
Sbjct: 190  ERIVDWLADYDVLFSGTQATVHSKLVEFQKEIVRLQVIEDDPRYWEVITSALAVGWLEIV 249

Query: 773  VKMLRLHGSYQLDQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKA 952
            VK+LRLHGSYQLDQLS RE ENGLVEAVA+LISKMPR+RPE   G+LGECFK+KPDFIKA
Sbjct: 250  VKLLRLHGSYQLDQLSNRETENGLVEAVAILISKMPRMRPELEAGRLGECFKTKPDFIKA 309

Query: 953  WEKWRSQITKLDCSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATC 1096
            WEKWR+QITKLDCS FW+QCD+ QTREGLRN+LQ+MLGNT  LCT+TC
Sbjct: 310  WEKWRAQITKLDCSSFWVQCDHRQTREGLRNMLQLMLGNTNNLCTSTC 357


>ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|222865653|gb|EEF02784.1|
            predicted protein [Populus trichocarpa]
          Length = 720

 Score =  439 bits (1129), Expect = e-121
 Identities = 219/348 (62%), Positives = 263/348 (75%), Gaps = 6/348 (1%)
 Frame = +2

Query: 68   GALVQFSGETRDSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGSPDAPE--GA 241
            G LV F  +T +  VVYPLHHGL+ P+SRV+ISW+RGN+LRVSL   P  + D+    G 
Sbjct: 15   GELVPFVPDT-EIAVVYPLHHGLKPPISRVSISWARGNNLRVSLLRNPPSNSDSDGEIGG 73

Query: 242  KVVEVKLSDGDPEITD-ANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXX---YHLDWWE 409
            KVVEV L  G  ++ + A WRRIAYGSV PF                      +HLDW +
Sbjct: 74   KVVEVNLDSGAADVREPAQWRRIAYGSVTPFALLQSRKNSASILSKLQSSPSPFHLDW-Q 132

Query: 410  HVLQYSKDISSLLGDPKSRPSPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWL 589
            +V++YSKDI  LLG+PKS  +P+IED   ++K+ EEPT LKAAWELME+FY DK  Q+WL
Sbjct: 133  YVMEYSKDIKELLGNPKSNYNPLIEDPKEVLKKGEEPTSLKAAWELMEMFYADKLCQSWL 192

Query: 590  PERLVDWLADYDSLFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDI 769
            PERLVDWLADYD L +  Q  +H KLV+FQ  LV +QVIEDDP+YWE +SSAL+VGWL+I
Sbjct: 193  PERLVDWLADYDCLLSGDQPAVHSKLVEFQGTLVTLQVIEDDPKYWEVISSALAVGWLEI 252

Query: 770  VVKMLRLHGSYQLDQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIK 949
            VVK+LRLHGSYQLDQ+S+RE ENGLVE VAVLIS MPR+RPE   G+LGECFK+KPDF+K
Sbjct: 253  VVKLLRLHGSYQLDQISRRETENGLVETVAVLISMMPRMRPELKNGKLGECFKAKPDFMK 312

Query: 950  AWEKWRSQITKLDCSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTAT 1093
            AWEKWR QITKLD S FW+ CD+ QTREGL+NL+QIMLGNTEILCTAT
Sbjct: 313  AWEKWREQITKLDSSAFWVLCDHRQTREGLKNLIQIMLGNTEILCTAT 360