BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015673
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
ref|XP_003594127.1| Pentatricopeptide repeat-containing protein ...   196   3e-48
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi...   167   2e-39
emb|CBI26175.3| unnamed protein product [Vitis vinifera]              164   8e-39
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   164   8e-39

>ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Glycine max]
          Length = 912

 Score =  209 bits (533), Expect = 2e-52
 Identities = 107/154 (69%), Positives = 118/154 (76%)
 Frame = -3

Query: 463 PLVQDPQHFIRIFFHARQHQNHSDCEXXXXXXXXXXXXXXXXSHGRQIHSLAFKLGLHSN 284
           P VQDPQHFI IF +AR HQNH +CE                  GRQ+HSL  KLGLHSN
Sbjct: 247 PHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCSSSS---QGRQLHSLVLKLGLHSN 303

Query: 283 TFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRAGQLYNARQLFDKMPY 104
           TFIQNSLINMYAK GSI DA+ LF+A PTL+P+SCNIMV GY +AGQL NAR+LFD MP 
Sbjct: 304 TFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPD 363

Query: 103 KGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           KGCVSYTTMI+GLVQNECF E+LEVFKDMRS GV
Sbjct: 364 KGCVSYTTMIMGLVQNECFREALEVFKDMRSDGV 397



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/109 (33%), Positives = 65/109 (59%)
 Frame = -3

Query: 328 RQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRA 149
           R IH++A KL +     +  +L+  Y  C  + +AR LF+  P ++ VS N+M++GY +A
Sbjct: 421 RMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKA 480

Query: 148 GQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           G +  AR+LF+++P K  +S+ TMI G +      E+L +++ M   G+
Sbjct: 481 GLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGL 529



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/110 (34%), Positives = 59/110 (53%)
 Frame = -3

Query: 331 GRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVR 152
           G Q+H +  K G     FIQ ++I+ YA CG +  A   FE        S N +VSG+++
Sbjct: 552 GWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIK 611

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
              +  AR++FD MP +   S++TMI G  Q +    +LE+F  M + G+
Sbjct: 612 NRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGI 661


>ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365519|gb|ABN09753.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483175|gb|AES64378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  196 bits (497), Expect = 3e-48
 Identities = 112/193 (58%), Positives = 123/193 (63%)
 Frame = -3

Query: 580 VFISASLRLKIXXXXXXXXXXXXXXXXPTLRWVCTKAPPPLVQDPQHFIRIFFHARQHQN 401
           +FIS SLRLK                   LR + T        +PQHFI IF +AR HQN
Sbjct: 1   MFISLSLRLKFSPSSLPFH----------LRHISTSTFTK--PNPQHFIHIFTNARNHQN 48

Query: 400 HSDCEXXXXXXXXXXXXXXXXSHGRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDAR 221
           H D E                S GRQIHSL FKLGLH NTFIQNSLINMYAKCG I +A+
Sbjct: 49  HHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQ 108

Query: 220 FLFEASPTLDPVSCNIMVSGYVRAGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGE 41
            LF+   TLD VSCNIMVSGYVR GQ+ NAR+LFD MP KGCVSYTTMI+G VQN  F E
Sbjct: 109 LLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFRE 168

Query: 40  SLEVFKDMRSHGV 2
           +LEVFKDMRS GV
Sbjct: 169 ALEVFKDMRSCGV 181



 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 35/108 (32%), Positives = 61/108 (56%)
 Frame = -3

Query: 328 RQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRA 149
           R +H L  K+ +     +  +L++ Y  C  + +AR LF+  P  + V+ N+M++GY + 
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264

Query: 148 GQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHG 5
           G +  AR+LFD +  K  +S+ TMI G +Q     E+LE+++ M   G
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTG 312



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/110 (33%), Positives = 57/110 (51%)
 Frame = -3

Query: 331 GRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVR 152
           G Q+H    K G     FIQ ++I  YA CG +  A   FE        S N + +G+++
Sbjct: 336 GWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIK 395

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
            G + +A + FDKM  +   S++TMI G  Q+E    +LE+F  M + G+
Sbjct: 396 NGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI 445


>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  167 bits (422), Expect = 2e-39
 Identities = 86/164 (52%), Positives = 106/164 (64%)
 Frame = -3

Query: 493 LRWVCTKAPPPLVQDPQHFIRIFFHARQHQNHSDCEXXXXXXXXXXXXXXXXSHGRQIHS 314
           L+WV T +       P   +  F + R   +  DCE                S G+QIH+
Sbjct: 26  LKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQIHA 85

Query: 313 LAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRAGQLYN 134
           +  K G +SNTFI NSLINMY KCG +S AR LF++   LD VSCNIM+SGYV+  QL N
Sbjct: 86  IVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLEN 145

Query: 133 ARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           ARQLF KMP +GCVSYTTMI+GL QN+C+GE++EVFKDMRS GV
Sbjct: 146 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGV 189



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 42/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 331 GRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVR 152
           GRQ HSL  K G     FIQ ++I+ YA C  I  A   ++ S      S N+M+ G+ +
Sbjct: 344 GRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTK 403

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDM 17
            G +  ARQ+FD MP K   S++TMI G  QNE    +L++F  M
Sbjct: 404 NGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGM 448



 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 36/105 (34%), Positives = 60/105 (57%)
 Frame = -3

Query: 328 RQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRA 149
           R +H+L  KL       I  +L++MY    S+ D + LF   P  + VS N+M+ GYV++
Sbjct: 213 RMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKS 272

Query: 148 GQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMR 14
           G +  AR+LF+++P +   S+  MI G VQ +   ++L ++  MR
Sbjct: 273 GLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMR 317


>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  164 bits (416), Expect = 8e-39
 Identities = 86/164 (52%), Positives = 107/164 (65%)
 Frame = -3

Query: 493 LRWVCTKAPPPLVQDPQHFIRIFFHARQHQNHSDCEXXXXXXXXXXXXXXXXSHGRQIHS 314
           L+WV + AP  L   P   +R FF+  +   HSD E                S G+QIHS
Sbjct: 18  LKWV-SAAPSQLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHS 76

Query: 313 LAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRAGQLYN 134
           L FK GL SN F++NSLI+ Y KC  IS+AR LF+    LDPVSCNIM++GYV++G L N
Sbjct: 77  LVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDN 136

Query: 133 ARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           AR LF+KMP KGCVSYTTM++GL QN C+ E++ VFKDMR  GV
Sbjct: 137 ARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGV 180



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = -3

Query: 331 GRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVR 152
           G+Q H +  + G     FIQ ++I+ YA CG I+ A   FE        S N ++SG+VR
Sbjct: 305 GQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVR 364

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVG 68
            G +  ARQLFD+MP +   S+++MI G
Sbjct: 365 NGMIEQARQLFDEMPERDVFSWSSMISG 392



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = -3

Query: 328 RQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISD-ARFLFEASPTLDPVSCNIMVSGYVR 152
           R +H+L+FKLGL +   +  +L++MY  C  + D AR LFE  P  D VS   ++ GYV+
Sbjct: 204 RMLHALSFKLGLEALNIVATNLVHMYCVCSRLVDLARDLFERIPAKDVVSWGTIIDGYVQ 263

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
             +L  A +++  M   G      MIV L+     G ++ V +  + HG+
Sbjct: 264 IERLGEALRMYRSMLRTGVGPNEVMIVDLI--SACGRTMAVSEGQQFHGI 311


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  164 bits (416), Expect = 8e-39
 Identities = 86/164 (52%), Positives = 107/164 (65%)
 Frame = -3

Query: 493 LRWVCTKAPPPLVQDPQHFIRIFFHARQHQNHSDCEXXXXXXXXXXXXXXXXSHGRQIHS 314
           L+WV + AP  L   P   +R FF+  +   HSD E                S G+QIHS
Sbjct: 18  LKWV-SAAPSQLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHS 76

Query: 313 LAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRAGQLYN 134
           L FK GL SN F++NSLI+ Y KC  IS+AR LF+    LDPVSCNIM++GYV++G L N
Sbjct: 77  LVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDN 136

Query: 133 ARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           AR LF+KMP KGCVSYTTM++GL QN C+ E++ VFKDMR  GV
Sbjct: 137 ARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGV 180



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/109 (40%), Positives = 72/109 (66%)
 Frame = -3

Query: 328 RQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVRA 149
           R +H+L+FKLGL +   +  +L++MY  C S+ +AR LF+  P  + V+ N+M++GY ++
Sbjct: 204 RMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKS 263

Query: 148 GQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
           G +  AR LF+++P K  VS+ T+I G VQ E  GE+L +++ M   GV
Sbjct: 264 GLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGV 312



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 43/110 (39%), Positives = 64/110 (58%)
 Frame = -3

Query: 331 GRQIHSLAFKLGLHSNTFIQNSLINMYAKCGSISDARFLFEASPTLDPVSCNIMVSGYVR 152
           G+Q H +  + G     FIQ ++I+ YA CG I+ A   FE        S N ++SG+VR
Sbjct: 335 GQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVR 394

Query: 151 AGQLYNARQLFDKMPYKGCVSYTTMIVGLVQNECFGESLEVFKDMRSHGV 2
            G +  ARQLFD+MP +   S+++MI G  QNE    +L++F +M + GV
Sbjct: 395 NGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGV 444