BLASTX nr result

ID: Glycyrrhiza24_contig00015639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015639
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522894.1| PREDICTED: THO complex subunit 1-like [Glyci...   236   1e-64
gb|AFK47582.1| unknown [Lotus japonicus]                              224   2e-61
ref|XP_002299188.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-57
emb|CBI35093.3| unnamed protein product [Vitis vinifera]              202   2e-54
emb|CBI35079.3| unnamed protein product [Vitis vinifera]              202   2e-54

>ref|XP_003522894.1| PREDICTED: THO complex subunit 1-like [Glycine max]
          Length = 605

 Score =  236 bits (602), Expect(2) = 1e-64
 Identities = 121/147 (82%), Positives = 125/147 (85%)
 Frame = -1

Query: 694 EPEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 515
           E +YHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR
Sbjct: 443 EADYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 502

Query: 514 GKRSKKEETKSTAHQAEENQIATPATEIDGEGIIRTDATANPMEFDAATLXXXXXXXXXP 335
            KRSKKEETK TAHQ EENQIAT ATEIDG+G IRTD TA  MEFDAAT          P
Sbjct: 503 SKRSKKEETKGTAHQIEENQIATNATEIDGDG-IRTDTTATSMEFDAATAPGTQGGTTTP 561

Query: 334 DELQKQGSDTDVGQEAGQLEADADVEA 254
           +ELQK  SDTD GQEAGQLEADA+VEA
Sbjct: 562 EELQKLSSDTDGGQEAGQLEADAEVEA 588



 Score = 36.6 bits (83), Expect(2) = 1e-64
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 140 AGIIDGETDADVDLDAVG 87
           AG+IDGETDADVDLD VG
Sbjct: 588 AGMIDGETDADVDLDTVG 605


>gb|AFK47582.1| unknown [Lotus japonicus]
          Length = 179

 Score =  224 bits (571), Expect(2) = 2e-61
 Identities = 115/147 (78%), Positives = 124/147 (84%)
 Frame = -1

Query: 694 EPEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 515
           E EYHHKNNRVYCWKGLRLSARQDLEGFSKFTD+GIEGVVPLELLP DVR+K+Q+K NDR
Sbjct: 18  EAEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDNGIEGVVPLELLPSDVRTKFQSKSNDR 77

Query: 514 GKRSKKEETKSTAHQAEENQIATPATEIDGEGIIRTDATANPMEFDAATLXXXXXXXXXP 335
           GKR+KKEE K  AHQ EENQ+ATPATE DGEG IRTDA A PMEFDAAT+         P
Sbjct: 78  GKRAKKEEAKGAAHQVEENQVATPATENDGEG-IRTDAAATPMEFDAATVPDLQGGTPTP 136

Query: 334 DELQKQGSDTDVGQEAGQLEADADVEA 254
           +ELQKQ SD D GQEAGQLEADA+VEA
Sbjct: 137 EELQKQNSDPD-GQEAGQLEADAEVEA 162



 Score = 37.7 bits (86), Expect(2) = 2e-61
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -3

Query: 140 AGIIDGETDADVDLDAVG 87
           AGIIDGETDAD DLDAVG
Sbjct: 162 AGIIDGETDADADLDAVG 179


>ref|XP_002299188.1| predicted protein [Populus trichocarpa] gi|222846446|gb|EEE83993.1|
           predicted protein [Populus trichocarpa]
          Length = 608

 Score =  213 bits (541), Expect(2) = 4e-57
 Identities = 109/150 (72%), Positives = 121/150 (80%), Gaps = 3/150 (2%)
 Frame = -1

Query: 694 EPEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 515
           + EYHHKNNRVYCWKGLR SARQDL+GFS+FTDHGIEGVVPLELLPPDVRSKYQAKPNDR
Sbjct: 442 DAEYHHKNNRVYCWKGLRFSARQDLDGFSRFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 501

Query: 514 GKRSKKEETKSTAHQAEENQIATPATEIDGEGI-IRTDATANPMEFD--AATLXXXXXXX 344
            KR+KK+E K   HQ E+NQI+TPA+EIDGEGI I  +A+A PM+ D  A T        
Sbjct: 502 SKRAKKDEPKGALHQVEDNQISTPASEIDGEGIRIDLEASAAPMDTDVTATTGSISQSGT 561

Query: 343 XXPDELQKQGSDTDVGQEAGQLEADADVEA 254
             PDE QKQGSDTD GQEAGQLEADA+ EA
Sbjct: 562 PTPDEHQKQGSDTDGGQEAGQLEADAEAEA 591



 Score = 35.0 bits (79), Expect(2) = 4e-57
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -3

Query: 140 AGIIDGETDADVDLDAVG 87
           AG+IDGETDA+VDL+AVG
Sbjct: 591 AGMIDGETDAEVDLEAVG 608


>emb|CBI35093.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  202 bits (513), Expect(2) = 2e-54
 Identities = 102/148 (68%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
 Frame = -1

Query: 694 EPEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 515
           E EYHHKNNRVYCWKGLR +ARQDL+GFS+FT++GIEGVVP+ELLP DVRSKYQAKP+DR
Sbjct: 455 EAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDR 514

Query: 514 GKRSKKEETKSTAHQAEENQIATPATEIDGEGI-IRTDATANPMEFDAATLXXXXXXXXX 338
            KR+KKEETK  A QAEENQIATPA+EIDGEG  +  +A+A PM+ D             
Sbjct: 515 SKRAKKEETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTA------TTPT 568

Query: 337 PDELQKQGSDTDVGQEAGQLEADADVEA 254
            DE QKQ SDTD GQEAGQ EADA+ EA
Sbjct: 569 ADENQKQSSDTDAGQEAGQSEADAEAEA 596



 Score = 36.6 bits (83), Expect(2) = 2e-54
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -3

Query: 140 AGIIDGETDADVDLDAVG 87
           AG+IDGETDA+VDLDAVG
Sbjct: 596 AGMIDGETDAEVDLDAVG 613


>emb|CBI35079.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  202 bits (513), Expect(2) = 2e-54
 Identities = 102/148 (68%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
 Frame = -1

Query: 694 EPEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDR 515
           E EYHHKNNRVYCWKGLR +ARQDL+GFS+FT++GIEGVVP+ELLP DVRSKYQAKP+DR
Sbjct: 455 EAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDR 514

Query: 514 GKRSKKEETKSTAHQAEENQIATPATEIDGEGI-IRTDATANPMEFDAATLXXXXXXXXX 338
            KR+KKEETK  A QAEENQIATPA+EIDGEG  +  +A+A PM+ D             
Sbjct: 515 SKRAKKEETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTA------TTPT 568

Query: 337 PDELQKQGSDTDVGQEAGQLEADADVEA 254
            DE QKQ SDTD GQEAGQ EADA+ EA
Sbjct: 569 ADENQKQSSDTDAGQEAGQSEADAEAEA 596



 Score = 36.6 bits (83), Expect(2) = 2e-54
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -3

Query: 140 AGIIDGETDADVDLDAVG 87
           AG+IDGETDA+VDLDAVG
Sbjct: 596 AGMIDGETDAEVDLDAVG 613


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