BLASTX nr result

ID: Glycyrrhiza24_contig00015623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015623
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788...   124   8e-27
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc...   123   2e-26
ref|XP_003544972.1| PREDICTED: uncharacterized protein LOC100793...   122   5e-26
ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
gb|ABK92555.1| unknown [Populus trichocarpa]                          100   2e-19

>ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788237 [Glycine max]
          Length = 428

 Score =  124 bits (312), Expect = 8e-27
 Identities = 59/68 (86%), Positives = 65/68 (95%)
 Frame = -2

Query: 483 QAGTARYESRSSPPRDGSNRTSASSNLAKLKDMYGDLGDNKGDANMERVPRRDSGGEEVI 304
           QAGTA+YESRSSP R+ S RTSASSNLA+LKDMYGDLGDNKGDANMER+PR+DSGGEEVI
Sbjct: 360 QAGTAQYESRSSPQREESKRTSASSNLAQLKDMYGDLGDNKGDANMERIPRKDSGGEEVI 419

Query: 303 RLGGSSWK 280
           RLGGS+WK
Sbjct: 420 RLGGSTWK 427


>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
           gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
           [Medicago truncatula]
          Length = 433

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/92 (68%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
 Frame = -2

Query: 549 IGNGSRHNXXXXXXXXXXXXXSQA--GTARYESRSSPPRDGSNRTSASSNLAKLKDMYGD 376
           IGNGSR +             SQ+  GTAR++SRSSP RDGS +TSASSNLAKLKD+YGD
Sbjct: 341 IGNGSRRHRSRSRSRSRSRSRSQSQVGTARHDSRSSPQRDGSKKTSASSNLAKLKDLYGD 400

Query: 375 LGDNKGDANMERVPRRDSGGEEVIRLGGSSWK 280
           LG++KGDANMER+PRRD+ GEEVIRLGGSSWK
Sbjct: 401 LGESKGDANMERIPRRDNSGEEVIRLGGSSWK 432


>ref|XP_003544972.1| PREDICTED: uncharacterized protein LOC100793812 [Glycine max]
          Length = 444

 Score =  122 bits (305), Expect = 5e-26
 Identities = 63/90 (70%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 543 NGSRH--NXXXXXXXXXXXXXSQAGTARYESRSSPPRDGSNRTSASSNLAKLKDMYGDLG 370
           NGSRH                 QAGT  YESRSSP R+ S RTSASSNLAKLKDMYGDLG
Sbjct: 354 NGSRHYRRSRSRSRSRSRSRSLQAGTGWYESRSSPQREESKRTSASSNLAKLKDMYGDLG 413

Query: 369 DNKGDANMERVPRRDSGGEEVIRLGGSSWK 280
           D+KGDANMER+PR+DSGGEEVIRLGGS+WK
Sbjct: 414 DSKGDANMERIPRKDSGGEEVIRLGGSTWK 443


>ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|222848219|gb|EEE85766.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/69 (69%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
 Frame = -2

Query: 483 QAGTARYESRSSPPRDGS-NRTSASSNLAKLKDMYGDLGDNKGDANMERVPRRDSGGEEV 307
           QAGT+ ++   +P RDGS +RTSASSNLAKLKD+YGDLGD KGDA +ER PRRD+ GEEV
Sbjct: 329 QAGTSPFDQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEV 388

Query: 306 IRLGGSSWK 280
            RLGGS+W+
Sbjct: 389 FRLGGSTWR 397


>gb|ABK92555.1| unknown [Populus trichocarpa]
          Length = 427

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/69 (69%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
 Frame = -2

Query: 483 QAGTARYESRSSPPRDGS-NRTSASSNLAKLKDMYGDLGDNKGDANMERVPRRDSGGEEV 307
           QAGT+ ++   +P RDGS +RTSASSNLAKLKD+YGDLGD KGDA +ER PRRD+ GEEV
Sbjct: 359 QAGTSPFDQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEV 418

Query: 306 IRLGGSSWK 280
            RLGGS+W+
Sbjct: 419 FRLGGSTWR 427


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