BLASTX nr result
ID: Glycyrrhiza24_contig00015615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00015615
(1897 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi... 759 0.0
ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 679 0.0
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 661 0.0
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi... 653 0.0
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi... 653 0.0
>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 759 bits (1960), Expect = 0.0
Identities = 381/477 (79%), Positives = 414/477 (86%), Gaps = 3/477 (0%)
Frame = +3
Query: 135 PDSASETEKLVAVTDERRRRIAXXXXXXXXXXXXXXXXXXXXXVASQKAVSVILRREATK 314
P S S + VTDER RRIA VASQKAVSVIL REATK
Sbjct: 42 PPSPSSLSASLVVTDERTRRIARELEKLKARERKEMRNRK---VASQKAVSVILWREATK 98
Query: 315 AIIDKR---RTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVFELMREQLWYRPNPG 485
A+IDK R KKGPINSKKLLPRTVLEALHERVTA RWESALKVFEL+ EQ+WY+P+ G
Sbjct: 99 AMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLHEQIWYKPDTG 158
Query: 486 VYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSRSGLLERAFTLLEEM 665
VYIKLIVMLGKC+QPEKA ELFQAMVDEGCVLDCESYTALLSAYSRSGLL++AF+LLEEM
Sbjct: 159 VYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEM 218
Query: 666 KSTPGCMPDVQTYSILIKSCLQVFAFDKVQNLLSDMAIHGVKPNTVTYNTLIDAYGKAKR 845
K+TPGC PDVQTYSIL+KSCLQVFAFDK+Q+LLSDM G+KPNTVTYNTLIDAYGKA++
Sbjct: 219 KNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARK 278
Query: 846 FSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDKFQTTGIQPNVQTFN 1025
FSEMES LVEML D+ CQPDVWTMNSTLRAFGN+GQIETME+CY+KFQ GIQPNVQTFN
Sbjct: 279 FSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFN 338
Query: 1026 ILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLRQMEYLFRLMRSE 1205
ILLDSYGKA+DYKKMSAVMEYMQKYHYSWTIVT+NIVIDAFGKAGDL+QMEYLFRLMRSE
Sbjct: 339 ILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSE 398
Query: 1206 RIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNCLVDAFGRLGCLDEM 1385
RIKPSCVTLCSLVRAYA AGKPEKI GVLRFVENSDV LDT+FFNCLVDA+ RLGCL EM
Sbjct: 399 RIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEM 458
Query: 1386 RGVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKEVRALLTTVKRPPSKRDKPDF 1556
+GVLE+M+Q GCKPDI+TYRTMIK Y++KGM S KE+R LL TV RPP KRDKPDF
Sbjct: 459 KGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPTVNRPPLKRDKPDF 515
>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product
[Vitis vinifera]
Length = 497
Score = 679 bits (1753), Expect = 0.0
Identities = 332/431 (77%), Positives = 380/431 (88%)
Frame = +3
Query: 264 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 443
+AS+KA+SVILRREATKA+I+K+R GP NSKKLLPRTVLEALHER+TA RWESALKVF
Sbjct: 69 IASKKAISVILRREATKAVIEKKR---GPNNSKKLLPRTVLEALHERITALRWESALKVF 125
Query: 444 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 623
EL+REQLWYRPN G+YIKLIVMLGKC+QPEKA LF AM+DEGCV++ E+YTALLSAYSR
Sbjct: 126 ELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSR 185
Query: 624 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCLQVFAFDKVQNLLSDMAIHGVKPNTV 803
SGL ++AF+LLE+MK+TP C PDV TYS+LIKSCLQV AFDKV LLSDMA G+KPNTV
Sbjct: 186 SGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTV 245
Query: 804 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 983
TYNTLIDAYGKAKRF+EMESTL+EML + C+PDVWTMNSTLRAFG+ GQIETME+CY+K
Sbjct: 246 TYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEK 305
Query: 984 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1163
FQ+ GI+PN++TFNILLDSYGKA Y+KMSAVMEYMQKYH+SWTIVTYN+VIDAFG+AGD
Sbjct: 306 FQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGD 365
Query: 1164 LRQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1343
L+QMEYLFRLMRSERIKPSCVTLCSLVRAY AGK EKIGGVLRF+ENSDV LD +FFNC
Sbjct: 366 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNC 425
Query: 1344 LVDAFGRLGCLDEMRGVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKEVRALLTTVK 1523
LVDA+GRLGC EM+GVLE+M++KGCKPD ITYRTMIKAY GM S KE++ L+
Sbjct: 426 LVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPD 485
Query: 1524 RPPSKRDKPDF 1556
+ KPDF
Sbjct: 486 ETRLEMGKPDF 496
>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 636
Score = 661 bits (1706), Expect = 0.0
Identities = 323/415 (77%), Positives = 367/415 (88%)
Frame = +3
Query: 264 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 443
+AS+KA+SVILRREATKAII+K+R GP NSKKLLPRTVLEALHER+TA RWESALKVF
Sbjct: 86 IASRKAISVILRREATKAIIEKKR---GPTNSKKLLPRTVLEALHERITALRWESALKVF 142
Query: 444 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 623
EL+REQ+WYRP G+YIKLIVMLGKC+QPEKA ELFQAM+ EGC + ESYTALLSAY R
Sbjct: 143 ELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGR 202
Query: 624 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCLQVFAFDKVQNLLSDMAIHGVKPNTV 803
SGLL++AF+LLEEMK P C PDV TYSILIKSC+QVFAFDK + LLS+M G+ PNT+
Sbjct: 203 SGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTI 262
Query: 804 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 983
TYNTLIDAYGKAK F EME+TLV+ML Q+C+PDVWTMNSTLRAFG GQIETME+CY+K
Sbjct: 263 TYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEK 322
Query: 984 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1163
FQ GI+P++ TFN+LLDSYGKA DYKKMSAVMEYMQKYHYSWTI+TYNIVIDAFG+AGD
Sbjct: 323 FQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGD 382
Query: 1164 LRQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1343
L+QMEYLFRLMRSERIKPSCVTLCSLVRAY A KPEKI GVLRF+ENSD++LDT+FFNC
Sbjct: 383 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNC 442
Query: 1344 LVDAFGRLGCLDEMRGVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKEVRAL 1508
LVDA+GR+GC EM+GVL +MEQKG +PD ITYRTMIKAYS KGM VKE++ L
Sbjct: 443 LVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDL 497
>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 653 bits (1684), Expect = 0.0
Identities = 319/430 (74%), Positives = 368/430 (85%)
Frame = +3
Query: 264 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 443
+ASQKA+SVILRREATKA+I+++R GP NSKKLLPRTVLEALH+R+T RWESALKVF
Sbjct: 86 IASQKAISVILRREATKAVIERKR---GPNNSKKLLPRTVLEALHDRITTLRWESALKVF 142
Query: 444 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 623
EL+REQLWYRP G+YIKLIVMLGKC+Q EKA ELFQ M++EGC + ESYTALLSAYSR
Sbjct: 143 ELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSR 202
Query: 624 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCLQVFAFDKVQNLLSDMAIHGVKPNTV 803
SGLL+ AF++L EMK++P C PDV TYSILIKSCLQVFAF+K Q LLSDM G+KPNT+
Sbjct: 203 SGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTI 262
Query: 804 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 983
TYNT IDAYGKAK F+EMES LV+ML D C+PDVWTMNSTLRAFG GQ+ETME+CY+K
Sbjct: 263 TYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEK 322
Query: 984 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1163
FQ GIQP++QTFNILLDSYGKA Y+KMSAVMEYMQKYHYSWTIVTYNIVIDAFG+AG+
Sbjct: 323 FQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGN 382
Query: 1164 LRQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1343
L+QME+LFRLMRSERIKPSCVTLCSLVRAY AGK EKI VL VENSD+ LDT+F+NC
Sbjct: 383 LKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNC 442
Query: 1344 LVDAFGRLGCLDEMRGVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKEVRALLTTVK 1523
LVDA+GRL C EM+ VL +MEQ+GCKPD TYRTM +AYS GM + KE++ L+TT +
Sbjct: 443 LVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 502
Query: 1524 RPPSKRDKPD 1553
PSKR +PD
Sbjct: 503 --PSKRTRPD 510
>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 653 bits (1684), Expect = 0.0
Identities = 319/430 (74%), Positives = 368/430 (85%)
Frame = +3
Query: 264 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 443
+ASQKA+SVILRREATKA+I+++R GP NSKKLLPRTVLEALH+R+T RWESALKVF
Sbjct: 31 IASQKAISVILRREATKAVIERKR---GPNNSKKLLPRTVLEALHDRITTLRWESALKVF 87
Query: 444 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 623
EL+REQLWYRP G+YIKLIVMLGKC+Q EKA ELFQ M++EGC + ESYTALLSAYSR
Sbjct: 88 ELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSR 147
Query: 624 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCLQVFAFDKVQNLLSDMAIHGVKPNTV 803
SGLL+ AF++L EMK++P C PDV TYSILIKSCLQVFAF+K Q LLSDM G+KPNT+
Sbjct: 148 SGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTI 207
Query: 804 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 983
TYNT IDAYGKAK F+EMES LV+ML D C+PDVWTMNSTLRAFG GQ+ETME+CY+K
Sbjct: 208 TYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEK 267
Query: 984 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1163
FQ GIQP++QTFNILLDSYGKA Y+KMSAVMEYMQKYHYSWTIVTYNIVIDAFG+AG+
Sbjct: 268 FQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGN 327
Query: 1164 LRQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1343
L+QME+LFRLMRSERIKPSCVTLCSLVRAY AGK EKI VL VENSD+ LDT+F+NC
Sbjct: 328 LKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNC 387
Query: 1344 LVDAFGRLGCLDEMRGVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKEVRALLTTVK 1523
LVDA+GRL C EM+ VL +MEQ+GCKPD TYRTM +AYS GM + KE++ L+TT +
Sbjct: 388 LVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 447
Query: 1524 RPPSKRDKPD 1553
PSKR +PD
Sbjct: 448 --PSKRTRPD 455