BLASTX nr result

ID: Glycyrrhiza24_contig00015614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015614
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [...   716   0.0  
ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containin...   671   0.0  
ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containin...   668   0.0  
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   488   e-135
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...   476   e-132

>ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355518206|gb|AES99829.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 422

 Score =  716 bits (1849), Expect = 0.0
 Identities = 330/384 (85%), Positives = 361/384 (94%), Gaps = 3/384 (0%)
 Frame = +1

Query: 1    LKINGNRDRDAAAQSTPYPDRPGEPDCLYYLRTGMCGYGSNCRYNHPANVSLVTQYGEEL 180
            LKIN  RDRDA  QS PYPDRPGEPDC+YYLRTGMCGYGSNCRYNHPAN+S VTQYGEEL
Sbjct: 27   LKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANISPVTQYGEEL 86

Query: 181  PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVLFNTLGLPMRQEEKSCPYYMRT 360
            PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPV+FNTLGLPMRQEEKSCPYYMRT
Sbjct: 87   PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVVFNTLGLPMRQEEKSCPYYMRT 146

Query: 361  GSCKFGVACKFHHPQHASF--GAYPMAGSSPSTTISASGFPYAGGFPAWSVPRMSYLSGQ 534
            GSCKFGVACKFHHPQ A+   GAYP+A S PSTT+++SGFPYAGGFPAWS+PRMSYLSGQ
Sbjct: 147  GSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYLSGQ 206

Query: 535  GLQSYVPPFLPSSQGVIPALSWNNYMGSMNPAMPTGFLGSNLVYDYMNP-GESLSGGQVM 711
             +QSYVPPFLPSSQG++PALSW+NYMGS+NPAMPTGF+GSNLVYDYMNP GE+LSGGQ M
Sbjct: 207  AIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETLSGGQAM 266

Query: 712  SSTLPDRPDQPECKYFMNTGTCKYGSDCKFHHPKERIAQSLSINPLGLPLRPGHAVCSYY 891
            +S+LPDRP+QP+CKYFM+TGTCKYGSDCKFHHPKERIAQ+LSINPLGLP+RPG+A+CSYY
Sbjct: 267  NSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAICSYY 326

Query: 892  RVNGICKFGPTCKFDHPVLAIPQNYGLPSPALSVFDASLLSNPRGLSTVQPTETSPSKLS 1071
            R+ G+CKFGPTCKFDHPV+AI QNYGLPSP LSVFDASLL+NPR LSTVQP ETSPSK S
Sbjct: 327  RIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDASLLTNPRRLSTVQPAETSPSKQS 386

Query: 1072 SDKLDQHSDTKAATEDSSKQADTT 1143
            +DKL Q SDTKAATEDSSKQAD+T
Sbjct: 387  TDKL-QQSDTKAATEDSSKQADST 409


>ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like isoform
            1 [Glycine max] gi|356501263|ref|XP_003519445.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            3-like isoform 2 [Glycine max]
          Length = 415

 Score =  671 bits (1732), Expect = 0.0
 Identities = 321/396 (81%), Positives = 342/396 (86%), Gaps = 3/396 (0%)
 Frame = +1

Query: 1    LKINGNRDRDAAAQSTPYPDRPGEPDCLYYLRTGMCGYGSNCRYNHPANVSLVTQYGEEL 180
            LKIN N DRDAAAQST YPDRPGEP+CLYYLRTGMCGYG+NCRY+HPA++S+ T YGEEL
Sbjct: 24   LKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTGMCGYGTNCRYHHPAHISIGTHYGEEL 83

Query: 181  PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVLFNTLGLPMRQEEKSCPYYMRT 360
            P+R GQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPV FNTLGLPMRQEEKSCPYYMRT
Sbjct: 84   PQRAGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVSFNTLGLPMRQEEKSCPYYMRT 143

Query: 361  GSCKFGVACKFHHPQHASFGAYPMAGS--SPSTTISASGFPYAGGFPAWS-VPRMSYLSG 531
            GSCKFGVACKFHHPQHAS GAYP+AGS    ST I  SG PYAGGFPAWS VPRMSYLSG
Sbjct: 144  GSCKFGVACKFHHPQHASLGAYPLAGSPTPTSTIIPTSGLPYAGGFPAWSAVPRMSYLSG 203

Query: 532  QGLQSYVPPFLPSSQGVIPALSWNNYMGSMNPAMPTGFLGSNLVYDYMNPGESLSGGQVM 711
            QGLQSYVPPFL SSQGVIP  SWNNYMG+MNPAMP GFLGSNLVYDYMN GESL GGQ +
Sbjct: 204  QGLQSYVPPFLSSSQGVIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYMNLGESLFGGQAI 263

Query: 712  SSTLPDRPDQPECKYFMNTGTCKYGSDCKFHHPKERIAQSLSINPLGLPLRPGHAVCSYY 891
            +S LP+RPDQPEC+YFM+TGTCKYGSDCKFHHPKER++QSL INPLGLP+RPG AVCSYY
Sbjct: 264  NSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSL-INPLGLPVRPGQAVCSYY 322

Query: 892  RVNGICKFGPTCKFDHPVLAIPQNYGLPSPALSVFDASLLSNPRGLSTVQPTETSPSKLS 1071
            R+ G+CKFGPTCKFDHPVL IPQNYGL SPA++V D  L    RGLS VQP ETSPSKLS
Sbjct: 323  RIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPL---TRGLSNVQPPETSPSKLS 379

Query: 1072 SDKLDQHSDTKAATEDSSKQADTTXXXXXXXXXXLH 1179
              KL QHSD KAATEDSSKQ DTT          LH
Sbjct: 380  DKKL-QHSDAKAATEDSSKQDDTTLNSFPASAEPLH 414


>ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Glycine
            max]
          Length = 417

 Score =  668 bits (1724), Expect = 0.0
 Identities = 318/398 (79%), Positives = 339/398 (85%), Gaps = 4/398 (1%)
 Frame = +1

Query: 1    LKINGNRDRDAAAQSTPYPDRPGEPDCLYYLRTGMCGYGSNCRYNHPANVSLVTQYGEEL 180
            LKIN N DRDAAAQST YPDRPGEP+CLYYLRTG CGYGSNCRY+HPA++S+ T YGEEL
Sbjct: 24   LKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTGACGYGSNCRYHHPAHISIGTHYGEEL 83

Query: 181  PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVLFNTLGLPMRQEEKSCPYYMRT 360
            P+R GQPDCEYFLKTG CKYGSTCKYHHPKDRRGAAPV FNTLG PMRQEEKSCPYYMRT
Sbjct: 84   PQRAGQPDCEYFLKTGMCKYGSTCKYHHPKDRRGAAPVSFNTLGFPMRQEEKSCPYYMRT 143

Query: 361  GSCKFGVACKFHHPQHASFGAYPMAGSSP---STTISASGFPYAGGFPAWS-VPRMSYLS 528
            GSCKFGVACKFHHPQ+AS GAYP+AG  P   ST I  SG  YAGGFPAWS VPRMSYLS
Sbjct: 144  GSCKFGVACKFHHPQYASLGAYPLAGGPPTPTSTIIPTSGLSYAGGFPAWSAVPRMSYLS 203

Query: 529  GQGLQSYVPPFLPSSQGVIPALSWNNYMGSMNPAMPTGFLGSNLVYDYMNPGESLSGGQV 708
            GQGLQSYVPPFLPSSQGVIP  SWNNYMG+MNPAMP GFLGSNLVYDYMN GE L GGQ 
Sbjct: 204  GQGLQSYVPPFLPSSQGVIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYMNLGEPLFGGQA 263

Query: 709  MSSTLPDRPDQPECKYFMNTGTCKYGSDCKFHHPKERIAQSLSINPLGLPLRPGHAVCSY 888
            ++S LP+RPDQPEC+YFM+TGTCKYGSDCKFHHPKERI+QSL INPLGLP+RPG AVCSY
Sbjct: 264  INSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERISQSL-INPLGLPVRPGQAVCSY 322

Query: 889  YRVNGICKFGPTCKFDHPVLAIPQNYGLPSPALSVFDASLLSNPRGLSTVQPTETSPSKL 1068
            YR+ G+CKFGPTCKFDHPVL IPQNYGL SPA++V D  L    RGLS VQP ETSPSKL
Sbjct: 323  YRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPL---TRGLSNVQPPETSPSKL 379

Query: 1069 SSDKLDQHSDTKAATEDSSKQADTTXXXXXXXXXXLHE 1182
            SSD   QHSD KAATEDSSKQ DTT          LH+
Sbjct: 380  SSDNKLQHSDAKAATEDSSKQDDTTSNSFPASAEPLHD 417


>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
            vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
            product [Vitis vinifera]
          Length = 450

 Score =  488 bits (1256), Expect = e-135
 Identities = 236/374 (63%), Positives = 275/374 (73%), Gaps = 17/374 (4%)
 Frame = +1

Query: 1    LKINGNRDRDAAAQSTPYPDRPGEPDCLYYLRTGMCGYGSNCRYNHPANVSLVTQYGEEL 180
            LKI+ N++  +   S+PYPDRPGEPDC+YYLRTG+CGYGSNCR+NHPA      QY  EL
Sbjct: 27   LKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGEL 86

Query: 181  PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVLFNTLGLPMRQEEKSCPYYMRT 360
            PERVGQPDC YFLKTGTCKYGSTCKYHHP+DR GA PV  N +GLPMRQEEK C YYMRT
Sbjct: 87   PERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVSLNIVGLPMRQEEKPCSYYMRT 146

Query: 361  GSCKFGVACKFHHPQHASFGAYPMA------GSSPSTTISASGFPYAGGFPAWSVPRMSY 522
            G CKFG ACKFHHPQ AS G    A      GS+ S+ + +SG PY GG PAWS+PR  Y
Sbjct: 147  GLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPY 206

Query: 523  LSG---QGLQSYVPPFLPSSQGVIPALSWNNYMGSMNPAMPTGFLGSNLVYDYMNPGESL 693
            + G   QG Q+Y+P  L  SQG++PA  WN YMG+M+P   TG LGSNLVY+  N  ES 
Sbjct: 207  IPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMGNMSPISSTGILGSNLVYNSRNQSESG 266

Query: 694  SGGQV--MSST---LPDRPDQPECKYFMNTGTCKYGSDCKFHHPKERIAQ--SLSINPLG 852
            S GQV  +SS    LP+RPDQPEC+YFM+TG+CKYGSDCK+HHPKERIAQ  + ++ PLG
Sbjct: 267  SSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLG 326

Query: 853  LPLRPGHAVCSYYRVNGICKFGPTCKFDHPVLAIPQ-NYGLPSPALSVFDASLLSNPRGL 1029
            LPLRPG AVCS+Y + G+CK+GPTCKFDHP+      NY L  P LS+ D SLL   R  
Sbjct: 327  LPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNS 386

Query: 1030 STVQPTETSPSKLS 1071
            STV  +ETSPSK S
Sbjct: 387  STVHSSETSPSKSS 400


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
            gi|223531614|gb|EEF33442.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 456

 Score =  476 bits (1226), Expect = e-132
 Identities = 229/374 (61%), Positives = 272/374 (72%), Gaps = 16/374 (4%)
 Frame = +1

Query: 1    LKINGNRDRDAAAQSTPYPDRPGEPDCLYYLRTGMCGYGSNCRYNHPANVSLVTQYGEEL 180
            LKI+ N+++   A S+PYPDRPGEPDC+YYLRTG+CGYG+NCR+NHP   +   Q+ EEL
Sbjct: 34   LKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHPPYAAQGNQFKEEL 93

Query: 181  PERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGAAPVLFNTLGLPMRQEEKSCPYYMRT 360
            PERVGQPDC Y+LKTGTCKYGSTCKYHHP+DR GA PV FN +GLPMRQ+EKSCPYYMRT
Sbjct: 94   PERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPVSFNIVGLPMRQDEKSCPYYMRT 153

Query: 361  GSCKFGVACKFHHPQHASFG-AYPMAG---SSP--STTISASGFPYAGGFPAWSVPRMSY 522
            GSCKFGVACKFHHPQ A  G   P  G   S P  S+ + +SG PY GG P WS+PR  Y
Sbjct: 154  GSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPY 213

Query: 523  LSG---QGLQSYVPPFLPSSQGVIPALSWNNYMGSMNPAMPTGFLGSNLVYDYMNPGESL 693
            +SG   QG Q+Y+P  L  SQGV+ A  WN Y+G+++P      LGS++VY+  N  ES 
Sbjct: 214  VSGPRLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSPMSSGSVLGSSIVYNSRNQSESG 273

Query: 694  SGGQV-----MSSTLPDRPDQPECKYFMNTGTCKYGSDCKFHHPKERIAQ--SLSINPLG 852
            S GQV      SS LP+RPDQPEC+YFMNTGTCKYGSDCK+HHPKERIAQ  + SI P+G
Sbjct: 274  SSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPVG 333

Query: 853  LPLRPGHAVCSYYRVNGICKFGPTCKFDHPVLAIPQNYGLPSPALSVFDASLLSNPRGLS 1032
            LP RPG  +CS Y + G+CKFGPTC+FDHP    P  Y L    LS+ D+SLLS PR +S
Sbjct: 334  LPSRPGQPICSNYSMYGLCKFGPTCRFDHPFTGYPYGYSLSLQPLSIIDSSLLSYPR-MS 392

Query: 1033 TVQPTETSPSKLSS 1074
                +  SP  LSS
Sbjct: 393  PPALSSESPISLSS 406


Top