BLASTX nr result

ID: Glycyrrhiza24_contig00015607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015607
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...   210   9e-53
ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   207   6e-52
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   189   2e-46
ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   183   1e-44
ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   183   1e-44

>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score =  210 bits (535), Expect = 9e-53
 Identities = 102/115 (88%), Positives = 111/115 (96%)
 Frame = +3

Query: 3   VYSKALILASQFNCLEEMLITVAMLSVESIFYTPRDKYDEARTATKCFSSPEGDHITLIN 182
           +YSKALILASQFNCLEEMLITVA+LSVESIFY+PRDK +EARTATKCFSSPEGDHITLIN
Sbjct: 494 LYSKALILASQFNCLEEMLITVALLSVESIFYSPRDKLEEARTATKCFSSPEGDHITLIN 553

Query: 183 VYRAANDLLEKRSMEMSKAKSEKVLRKWCKENFISSRSLRHARDIHRQIQGHVQQ 347
           VYRA+ND LEKRSMEM+ AK+EKV RKWCKENFI+SRSLRHARDIHRQIQGHV+Q
Sbjct: 554 VYRASNDFLEKRSMEMNTAKTEKVYRKWCKENFINSRSLRHARDIHRQIQGHVEQ 608


>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  207 bits (528), Expect = 6e-52
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +3

Query: 3   VYSKALILASQFNCLEEMLITVAMLSVESIFYTPRDKYDEARTATKCFSSPEGDHITLIN 182
           +YSKALILASQFNCLEEMLITVA+LSVESIFY+PRDK +EARTATKCFSSP GDHITLIN
Sbjct: 494 LYSKALILASQFNCLEEMLITVALLSVESIFYSPRDKLEEARTATKCFSSPVGDHITLIN 553

Query: 183 VYRAANDLLEKRSMEMSKAKSEKVLRKWCKENFISSRSLRHARDIHRQIQGHVQQ 347
           VYRA+ND LEKRSMEM+ AK+EKV RKWCKENFI+SRSLRHARDIHRQIQGHV+Q
Sbjct: 554 VYRASNDFLEKRSMEMNMAKTEKVYRKWCKENFINSRSLRHARDIHRQIQGHVEQ 608


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 690

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/120 (76%), Positives = 107/120 (89%), Gaps = 5/120 (4%)
 Frame = +3

Query: 3   VYSKALILASQFNCLEEMLITVAMLSVESIFYTPRDKYDEARTATKCFSSPEGDHITLIN 182
           +YSKALILASQFNCLEEMLITVAMLSVESIFY PR+K +E+RTA KCFSSP+GDH+TLI+
Sbjct: 474 IYSKALILASQFNCLEEMLITVAMLSVESIFYAPREKSEESRTAMKCFSSPDGDHLTLIS 533

Query: 183 VYRAANDLLEKRSMEMS-----KAKSEKVLRKWCKENFISSRSLRHARDIHRQIQGHVQQ 347
           VYRAA++LLEKR ME++     K K EK+LRKWCKENFI+ RSLRHARDIH QI+GHV+Q
Sbjct: 534 VYRAADELLEKRKMELNNEKNFKGKGEKILRKWCKENFINGRSLRHARDIHSQIRGHVEQ 593


>ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-like, partial [Cucumis
           sativus]
          Length = 694

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/115 (76%), Positives = 101/115 (87%)
 Frame = +3

Query: 3   VYSKALILASQFNCLEEMLITVAMLSVESIFYTPRDKYDEARTATKCFSSPEGDHITLIN 182
           +YSKALI+ASQFNCLEEMLITV+MLSVESIFY PR+K +EAR   KCFSSPEGDH+TLIN
Sbjct: 483 IYSKALIVASQFNCLEEMLITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLIN 542

Query: 183 VYRAANDLLEKRSMEMSKAKSEKVLRKWCKENFISSRSLRHARDIHRQIQGHVQQ 347
           VYR+A D L K+ +E+SK K EK LRKWCKENFI+SRSLRHARDIH QI+ HV+Q
Sbjct: 543 VYRSAVDFLNKKKLELSKEKLEKSLRKWCKENFINSRSLRHARDIHSQIRRHVEQ 597


>ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 709

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/115 (76%), Positives = 101/115 (87%)
 Frame = +3

Query: 3   VYSKALILASQFNCLEEMLITVAMLSVESIFYTPRDKYDEARTATKCFSSPEGDHITLIN 182
           +YSKALI+ASQFNCLEEMLITV+MLSVESIFY PR+K +EAR   KCFSSPEGDH+TLIN
Sbjct: 498 IYSKALIVASQFNCLEEMLITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLIN 557

Query: 183 VYRAANDLLEKRSMEMSKAKSEKVLRKWCKENFISSRSLRHARDIHRQIQGHVQQ 347
           VYR+A D L K+ +E+SK K EK LRKWCKENFI+SRSLRHARDIH QI+ HV+Q
Sbjct: 558 VYRSAVDFLNKKKLELSKEKLEKSLRKWCKENFINSRSLRHARDIHSQIRRHVEQ 612


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