BLASTX nr result

ID: Glycyrrhiza24_contig00015603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015603
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   118   4e-25
ref|XP_003616137.1| Ubiquitin [Medicago truncatula] gi|355517472...   104   7e-21
ref|XP_003616119.1| Regulator of nonsense transcripts-like prote...   104   7e-21
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   103   2e-20
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   101   6e-20

>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula]
            gi|355489654|gb|AES70857.1| DNA polymerase
            alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/96 (63%), Positives = 69/96 (71%)
 Frame = -1

Query: 293  NRQRANVALTRARHCLWILGNATTLIDSDSVWTKLVLDAKESGCFHEADEDREVXXXXXX 114
            NRQRANVALTRARHCLWILGN TTL  SDS+W +LVLDAKE GCFH ADED+++      
Sbjct: 831  NRQRANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADEDKKLAEAIED 890

Query: 113  XXXXXXXXXEFESPFKRLSLKDKSEATATTSRVSFA 6
                     E ESPFK+LSL+ KSE  ATTSR S +
Sbjct: 891  ALLEIEFLDESESPFKKLSLQGKSETFATTSRGSMS 926


>ref|XP_003616137.1| Ubiquitin [Medicago truncatula] gi|355517472|gb|AES99095.1| Ubiquitin
            [Medicago truncatula]
          Length = 1337

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -1

Query: 293  NRQRANVALTRARHCLWILGNATTLIDSDSVWTKLVLDAKESGCFHEADEDREVXXXXXX 114
            NRQRANVA+TRAR+CLWILGNA+TL +SDS+W KL++DAK   C+H ADED+++      
Sbjct: 1246 NRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIIDAKRRDCYHNADEDKKLARVIDD 1305

Query: 113  XXXXXXXXXEFESPFKRLSLKDKSEAT 33
                     E ESPFK+LSL +KSE T
Sbjct: 1306 VLFEIELLEESESPFKKLSLCEKSETT 1332


>ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
            gi|355517454|gb|AES99077.1| Regulator of nonsense
            transcripts-like protein [Medicago truncatula]
          Length = 860

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/93 (55%), Positives = 64/93 (68%)
 Frame = -1

Query: 293  NRQRANVALTRARHCLWILGNATTLIDSDSVWTKLVLDAKESGCFHEADEDREVXXXXXX 114
            NRQRANVA+TRAR+CLWILGNA TLI+SDSVW  +VLDAK   CFH A ED+ +      
Sbjct: 764  NRQRANVAMTRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCFHNAVEDKNLARAIND 823

Query: 113  XXXXXXXXXEFESPFKRLSLKDKSEATATTSRV 15
                       ESPF +LSL +KSEA+ ++SR+
Sbjct: 824  VLFEIKLLEGSESPFMKLSLGEKSEASTSSSRL 856


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 950

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/87 (56%), Positives = 63/87 (72%)
 Frame = -1

Query: 293  NRQRANVALTRARHCLWILGNATTLIDSDSVWTKLVLDAKESGCFHEADEDREVXXXXXX 114
            NRQR NVA+TRAR+CLWI+GNATTLI+S+SVW K+V+DAK+  CFH ADED+++      
Sbjct: 860  NRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCFHNADEDKKLDQVIED 919

Query: 113  XXXXXXXXXEFESPFKRLSLKDKSEAT 33
                     E ES F +LS++DKSE T
Sbjct: 920  ACFEFELLDESESAFNKLSIRDKSETT 946


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Glycine max]
          Length = 925

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/99 (54%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
 Frame = -1

Query: 293  NRQRANVALTRARHCLWILGNATTLIDSDSVWTKLVLDAKESGCFHEADEDREVXXXXXX 114
            NRQRANVALTRAR+CLWILGN  TL    S+W  LV DAKE GCFH AD+D+++      
Sbjct: 820  NRQRANVALTRARYCLWILGNENTLSSDYSLWRNLVNDAKERGCFHNADDDKKLAKAIEE 879

Query: 113  XXXXXXXXXEFESPFKRLSL--KDKSEATATTSRVSFAG 3
                     E+ESPFK+LSL    ++  TATT R SF G
Sbjct: 880  ESLLIELLDEYESPFKKLSLGSTSRTRTTATTFRGSFRG 918


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