BLASTX nr result

ID: Glycyrrhiza24_contig00015566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015566
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subuni...   163   2e-38
ref|XP_003518412.1| PREDICTED: anaphase-promoting complex subuni...   161   5e-38
ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago...   155   4e-36
ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   132   2e-29
emb|CBI25461.3| unnamed protein product [Vitis vinifera]              132   2e-29

>ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subunit 1-like [Glycine max]
          Length = 1694

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -3

Query: 258 MSIGVRRLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPETARDRDAEDNCDEVAS 79
           MSIGVR LTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPE ARDRDA+D+CD+VAS
Sbjct: 1   MSIGVRCLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPEIARDRDADDDCDDVAS 60

Query: 78  ALNNRGDHELFIRGNRIIWSIGARVF 1
           A +NRGDHELFIRGNRIIWS GARVF
Sbjct: 61  APSNRGDHELFIRGNRIIWSTGARVF 86


>ref|XP_003518412.1| PREDICTED: anaphase-promoting complex subunit 1-like [Glycine max]
          Length = 1700

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/86 (88%), Positives = 82/86 (95%)
 Frame = -3

Query: 258 MSIGVRRLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPETARDRDAEDNCDEVAS 79
           MSIGVRRLT+LGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPE ARDRDA+D+C ++AS
Sbjct: 1   MSIGVRRLTLLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPEIARDRDADDDCADIAS 60

Query: 78  ALNNRGDHELFIRGNRIIWSIGARVF 1
           A +NRGDHELFIRGNRIIWS GARVF
Sbjct: 61  APSNRGDHELFIRGNRIIWSTGARVF 86


>ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago truncatula]
           gi|355517995|gb|AES99618.1| Anaphase-promoting complex
           subunit [Medicago truncatula]
          Length = 1854

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/86 (84%), Positives = 81/86 (94%)
 Frame = -3

Query: 258 MSIGVRRLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPETARDRDAEDNCDEVAS 79
           MSIGVRRLT+LGEFKPFGLIAE+LDGK  + VT+ Y+YFLFDPE ARDRDAED+C+EVAS
Sbjct: 1   MSIGVRRLTLLGEFKPFGLIAESLDGKSIENVTENYEYFLFDPEIARDRDAEDDCNEVAS 60

Query: 78  ALNNRGDHELFIRGNRIIWSIGARVF 1
           ALNNRGDHELF+RGNRIIWSIGARVF
Sbjct: 61  ALNNRGDHELFVRGNRIIWSIGARVF 86


>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/86 (72%), Positives = 73/86 (84%)
 Frame = -3

Query: 258 MSIGVRRLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPETARDRDAEDNCDEVAS 79
           MS+G+RRL+VLGEFKPFGLI+EALDGKP DTV D YDYF+FDP+ AR+RD  D  D   S
Sbjct: 1   MSVGLRRLSVLGEFKPFGLISEALDGKPSDTVLDNYDYFVFDPQVARERDESDADDAPVS 60

Query: 78  ALNNRGDHELFIRGNRIIWSIGARVF 1
           AL++R DHELFIRGNRIIWS G+RV+
Sbjct: 61  ALSDRCDHELFIRGNRIIWSTGSRVY 86


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/86 (72%), Positives = 73/86 (84%)
 Frame = -3

Query: 258 MSIGVRRLTVLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPETARDRDAEDNCDEVAS 79
           MS+G+RRL+VLGEFKPFGLI+EALDGKP DTV D YDYF+FDP+ AR+RD  D  D   S
Sbjct: 1   MSVGLRRLSVLGEFKPFGLISEALDGKPSDTVLDNYDYFVFDPQVARERDESDADDAPVS 60

Query: 78  ALNNRGDHELFIRGNRIIWSIGARVF 1
           AL++R DHELFIRGNRIIWS G+RV+
Sbjct: 61  ALSDRCDHELFIRGNRIIWSTGSRVY 86


Top