BLASTX nr result

ID: Glycyrrhiza24_contig00015504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015504
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-...   206   3e-51
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             203   3e-50
ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago t...   190   2e-46
ref|XP_003607192.1| ESF1-like protein [Medicago truncatula] gi|3...   143   2e-32
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...   140   2e-31

>ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-like [Glycine max]
          Length = 696

 Score =  206 bits (524), Expect = 3e-51
 Identities = 107/136 (78%), Positives = 117/136 (86%)
 Frame = -2

Query: 580 AIDEGKIPNSAYDDPRFAALVSPDYAIDPTDPQFKRSAVYARQLAQKQQKGHMELSAERE 401
           +IDE KIP++AYDDPRF+AL SPDYAIDPT+PQFKRSA YARQLAQKQQK + +  AERE
Sbjct: 562 SIDEEKIPSNAYDDPRFSALFSPDYAIDPTNPQFKRSATYARQLAQKQQKDNADPPAERE 621

Query: 400 NTKLPKGTQLSADDSGMMQKGEEEGLDLLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKT 221
            TK+ KG QLS DDSGMM+KGEEE LD LKS KDKYELSSLVKSIKMKSKQ+QLPSD KT
Sbjct: 622 PTKV-KGMQLSFDDSGMMKKGEEERLDALKSTKDKYELSSLVKSIKMKSKQVQLPSDDKT 680

Query: 220 RKDGKSQFKGMGKKRH 173
            KDGKS  KGM KKRH
Sbjct: 681 MKDGKSHIKGMKKKRH 696


>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  203 bits (516), Expect = 3e-50
 Identities = 107/135 (79%), Positives = 117/135 (86%)
 Frame = -2

Query: 577 IDEGKIPNSAYDDPRFAALVSPDYAIDPTDPQFKRSAVYARQLAQKQQKGHMELSAEREN 398
           IDE KIP++AY+DPRF+AL SP+YAIDPTDPQFKRSA YARQLAQKQQK + +   ERE 
Sbjct: 563 IDEEKIPSNAYNDPRFSALFSPNYAIDPTDPQFKRSATYARQLAQKQQKDNADPPVEREP 622

Query: 397 TKLPKGTQLSADDSGMMQKGEEEGLDLLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKTR 218
           TKL KGTQLS++DSG M K EEEGLD LKSKKDKYELSSLVKSIKMKSKQ+QLPSD KTR
Sbjct: 623 TKL-KGTQLSSEDSGRM-KDEEEGLDALKSKKDKYELSSLVKSIKMKSKQVQLPSDNKTR 680

Query: 217 KDGKSQFKGMGKKRH 173
           KDGKS  KGM KKRH
Sbjct: 681 KDGKSYIKGMKKKRH 695


>ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago truncatula]
            gi|355509558|gb|AES90700.1| Pre-rRNA-processing protein
            ESF1 [Medicago truncatula]
          Length = 737

 Score =  190 bits (482), Expect = 2e-46
 Identities = 101/136 (74%), Positives = 112/136 (82%)
 Frame = -2

Query: 580  AIDEGKIPNSAYDDPRFAALVSPDYAIDPTDPQFKRSAVYARQLAQKQQKGHMELSAERE 401
            AIDEGKIPN+A+DDPRFA++ S D+AIDPTDPQFKRSAVYARQLAQKQQKG  ELS ERE
Sbjct: 605  AIDEGKIPNNAFDDPRFASIFSADFAIDPTDPQFKRSAVYARQLAQKQQKGREELSVERE 664

Query: 400  NTKLPKGTQLSADDSGMMQKGEEEGLDLLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKT 221
            + K PK TQLS+D SG   KG EE  D LKSK+DK ELSSLVKSIKMKSKQIQL SD  T
Sbjct: 665  HVKFPKETQLSSDGSGAKLKGGEEVSDDLKSKQDKLELSSLVKSIKMKSKQIQLSSDVNT 724

Query: 220  RKDGKSQFKGMGKKRH 173
            +K GKSQFK   K++H
Sbjct: 725  KKAGKSQFK---KRKH 737


>ref|XP_003607192.1| ESF1-like protein [Medicago truncatula] gi|355508247|gb|AES89389.1|
           ESF1-like protein [Medicago truncatula]
          Length = 809

 Score =  143 bits (361), Expect = 2e-32
 Identities = 87/142 (61%), Positives = 103/142 (72%), Gaps = 5/142 (3%)
 Frame = -2

Query: 577 IDEGKIPNSAY-DDPRFAALVS-PDYAIDPTDPQFKRSAVYARQLAQKQQKGHMELSAER 404
           IDEGK+PNS Y DDPRFA   S PDYAIDPTDPQFKRSA YARQ   ++QKG MELS   
Sbjct: 580 IDEGKVPNSTYSDDPRFAHFFSSPDYAIDPTDPQFKRSASYARQQLARKQKGQMELS--- 636

Query: 403 ENTKLPKGTQLSADD--SGMMQKGEEEGLDLLKS-KKDKYELSSLVKSIKMKSKQIQLPS 233
               +PK  Q+ +++  +GMM+K E+EGL + KS KKD+ ELS LVKS+KMKSK I    
Sbjct: 637 ----VPKVMQMPSENAGNGMMEKDEKEGLLVFKSTKKDEDELSFLVKSVKMKSKHI---L 689

Query: 232 DGKTRKDGKSQFKGMGKKRH*F 167
           + KTRKDGKSQF G+ KKR  F
Sbjct: 690 NSKTRKDGKSQFDGVEKKRQSF 711


>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
           gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
           ESF1, putative [Ricinus communis]
          Length = 722

 Score =  140 bits (354), Expect = 2e-31
 Identities = 75/128 (58%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
 Frame = -2

Query: 574 DEGKIPNSAYDDPRFAALV-SPDYAIDPTDPQFKRSAVYARQLAQKQQKGHMELSAEREN 398
           DE K+P   YDDPRF+AL  SP +A+DPTDPQFKRSA YARQ+AQ+Q KG  +  AE E+
Sbjct: 578 DENKLPTVDYDDPRFSALFNSPLFALDPTDPQFKRSAAYARQMAQRQHKGDRQELAEGEH 637

Query: 397 TKLPKGTQLSADDSGMMQKGEEEGLDLLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKTR 218
            K P  +QL +D+     K E    D   SKK+K+ELS+LV+SIKMKSKQ+QLPS+GKT+
Sbjct: 638 KKQPAKSQLLSDEPDA-NKNEHLTSDAASSKKEKHELSALVRSIKMKSKQVQLPSNGKTK 696

Query: 217 KDGKSQFK 194
           KD K QF+
Sbjct: 697 KDEKIQFR 704


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