BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015474
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   620   e-175
ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [...   613   e-173
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   495   e-137
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   494   e-137
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              493   e-137

>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  620 bits (1600), Expect = e-175
 Identities = 303/345 (87%), Positives = 323/345 (93%), Gaps = 1/345 (0%)
 Frame = +2

Query: 2    GLCYHDAVRPSDAGLTVIEFYSTKYKSSAPLQGWLQRIKTEQITVDGRVVTDANTVLRVG 181
            GL Y D VRPSDAGLT+IEFYSTKYKSSAPLQGWLQRIK++QIT+D RVVTD NT+LRVG
Sbjct: 17   GLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVTDPNTILRVG 76

Query: 182  SKLVYHRLPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 361
            SKLVYHR+PWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN
Sbjct: 77   SKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 136

Query: 362  KSTFEAHLRPHPVPVHRLGRGTSGILLCAKTKLARAHLASYFADGTSHIGGKRDTNQEHG 541
            KST EAH +PHPVPVHRLGRGTSGILLCAKTKLARA LASYFADGTS I GK  TNQE G
Sbjct: 137  KSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEGKGHTNQELG 196

Query: 542  KIAKIYRALVSRIIDDDKVTINQPIGMIKYPGVAKGLYVASESGKPALSVVDILERNIQE 721
            KIAKIYRALVS II++D+VTINQPIGM+KYPGVAKGLYVAS+SGKPALSVV +LERN++E
Sbjct: 197  KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPALSVVHVLERNVKE 256

Query: 722  NSTLVQ-VKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDIMDESFAEDGGYQ 898
            NSTLVQ VKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCD +DESFAEDGGY 
Sbjct: 257  NSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAEDGGYT 316

Query: 899  RPTKPVPGDCGYHLHAHKLVLSHPITNKFIEIIAPLPSILQRREE 1033
            RP+KPVPGDCGYHLHAH+L LSHPITN+ IE+IAPLPSILQ  EE
Sbjct: 317  RPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEE 361


>ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [Glycine max]
          Length = 371

 Score =  613 bits (1580), Expect = e-173
 Identities = 298/347 (85%), Positives = 318/347 (91%)
 Frame = +2

Query: 2    GLCYHDAVRPSDAGLTVIEFYSTKYKSSAPLQGWLQRIKTEQITVDGRVVTDANTVLRVG 181
            GL Y D VR SDAG T+IEFYSTKYKSSAPLQGWLQRIK+ QITVDG VVTD+NTVLRVG
Sbjct: 17   GLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITVDGGVVTDSNTVLRVG 76

Query: 182  SKLVYHRLPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 361
            SKL+YHRLPWKEPDAPH I+VLYEDDD+IALNKPSGLQVLPGGL+QQRT+LTQLQWE NN
Sbjct: 77   SKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQRTILTQLQWEANN 136

Query: 362  KSTFEAHLRPHPVPVHRLGRGTSGILLCAKTKLARAHLASYFADGTSHIGGKRDTNQEHG 541
            + T E H R HPVPVHRLGRGTSGILLCAKTKLARA LAS+FADGTSH+GGKRDT QE G
Sbjct: 137  QGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHVGGKRDTKQELG 196

Query: 542  KIAKIYRALVSRIIDDDKVTINQPIGMIKYPGVAKGLYVASESGKPALSVVDILERNIQE 721
            KIAK+YRALVS I+++DKVTINQPIG++KYPGVAKGLYVASESGKPALSVVDILE NIQE
Sbjct: 197  KIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKPALSVVDILETNIQE 256

Query: 722  NSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDIMDESFAEDGGYQR 901
            NSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLY VGGQPKCLDCD +DESFAEDGGYQR
Sbjct: 257  NSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAEDGGYQR 316

Query: 902  PTKPVPGDCGYHLHAHKLVLSHPITNKFIEIIAPLPSILQRREEEAE 1042
            PTKPVPGDCGY+LHAHKLVLSHP TN+ IEIIAPLPS L   EE  E
Sbjct: 317  PTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAKE 363


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  495 bits (1274), Expect = e-137
 Identities = 240/351 (68%), Positives = 292/351 (83%), Gaps = 3/351 (0%)
 Frame = +2

Query: 2    GLCYHDAVRPSDAGLTVIEFYSTKYKSSAPLQGWLQRIKTEQITVDGRVVTDANTVLRVG 181
            GL Y+D V+P D+G ++I FYS KYKSSAPL+GWLQRIK EQIT+DG V+TD  T+LR+G
Sbjct: 20   GLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPETILRIG 79

Query: 182  SKLVYHRLPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 361
            S LVY RLPWKEPD P+ +E+LYED+++IALNKPSGLQVLPGG+FQQRTVLTQLQW  ++
Sbjct: 80   SDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQW-WSS 138

Query: 362  KSTFEAHLRPHPVPVHRLGRGTSGILLCAKTKLARAHLASYFADGTSHIGGKRDTNQEHG 541
            K +F      HPVPVHRLGRGTSGILLCAKTKLAR   A+YFA+GTS +   R++  E G
Sbjct: 139  KQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEG 198

Query: 542  ---KIAKIYRALVSRIIDDDKVTINQPIGMIKYPGVAKGLYVASESGKPALSVVDILERN 712
               KI+KIYRALV+ II DD+V+++QPIG ++YPGVA+GLYVA+ SGKPA S V++LER+
Sbjct: 199  TKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERD 258

Query: 713  IQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDIMDESFAEDGG 892
             Q   TLVQV+IQSGRPHQIRIHLS IGHPLLGDPLY  GGQP CL  +++++SFAEDGG
Sbjct: 259  EQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVNQSFAEDGG 318

Query: 893  YQRPTKPVPGDCGYHLHAHKLVLSHPITNKFIEIIAPLPSILQRREEEAED 1045
            Y+RPTKPVPGDCGY+LHAH+L+L HP TN+ ++IIAPLP IL+ R  EAED
Sbjct: 319  YERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTR-IEAED 368


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  494 bits (1271), Expect = e-137
 Identities = 239/351 (68%), Positives = 292/351 (83%), Gaps = 3/351 (0%)
 Frame = +2

Query: 2    GLCYHDAVRPSDAGLTVIEFYSTKYKSSAPLQGWLQRIKTEQITVDGRVVTDANTVLRVG 181
            GL Y+D V+P D+G ++I FYS KYKSSAPL+GWLQRIK EQIT+DG V+TD  T+LR+G
Sbjct: 20   GLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPETILRIG 79

Query: 182  SKLVYHRLPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 361
            S LVY RLPWKEPD P+ +E+LYED+++IALNKPSGLQVLPGG+FQQRTVLTQLQW  ++
Sbjct: 80   SDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQW-WSS 138

Query: 362  KSTFEAHLRPHPVPVHRLGRGTSGILLCAKTKLARAHLASYFADGTSHIGGKRDTNQEHG 541
            K +F      HPVPVHRLGRGTSGILLCAKTKLAR   A+YFA+GTS +   R++  E G
Sbjct: 139  KQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEG 198

Query: 542  ---KIAKIYRALVSRIIDDDKVTINQPIGMIKYPGVAKGLYVASESGKPALSVVDILERN 712
               KI+KIYRALV+ II DD+V+++QPIG ++YPGVA+GLYVA+ SGKPA S V++LER+
Sbjct: 199  TKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERD 258

Query: 713  IQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDIMDESFAEDGG 892
             Q   TLVQV+IQSGRPHQIRIHLS IGHPL+GDPLY  GGQP CL  +++++SFAEDGG
Sbjct: 259  EQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAEDGG 318

Query: 893  YQRPTKPVPGDCGYHLHAHKLVLSHPITNKFIEIIAPLPSILQRREEEAED 1045
            Y+RPTKPVPGDCGY+LHAH+L+L HP TN+ ++IIAPLP IL+ R  EAED
Sbjct: 319  YERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTR-IEAED 368


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  493 bits (1270), Expect = e-137
 Identities = 237/330 (71%), Positives = 277/330 (83%), Gaps = 3/330 (0%)
 Frame = +2

Query: 2    GLCYHDAVRPSDAGLTVIEFYSTKYKSSAPLQGWLQRIKTEQITVDGRVVTDANTVLRVG 181
            GL Y+D V  SD+ LT+I++YS+K+K+SAPLQGWLQRI   QITVDG VVT+  T+LR G
Sbjct: 15   GLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTVVTEPKTILRAG 74

Query: 182  SKLVYHRLPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWETNN 361
            SKLVYHRLPW+EPDAP+ +E+LYEDDD+IALNKPSGLQVLPGGLFQQRTVLTQLQW  N 
Sbjct: 75   SKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWRANK 134

Query: 362  KSTFEAHLRPHPVPVHRLGRGTSGILLCAKTKLARAHLASYFADGTSHIGGKRDTNQEH- 538
            +++  A    H VPVHRLGRGTSGILLCAKTKLA+  LA+YFADGTS +GG RD + +  
Sbjct: 135  QNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRDADMKSR 194

Query: 539  --GKIAKIYRALVSRIIDDDKVTINQPIGMIKYPGVAKGLYVASESGKPALSVVDILERN 712
               KI+KIYRALV+ I+D D++ I QPIGM++YPGVAKGLYVAS SGKPALS V ILER+
Sbjct: 195  TMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSKVSILERD 254

Query: 713  IQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDIMDESFAEDGG 892
            +Q +  +VQV+IQSGRPHQIRIHLSFIGHPLLGDPLY  GGQPKC D +  +ES+A DGG
Sbjct: 255  VQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGG 314

Query: 893  YQRPTKPVPGDCGYHLHAHKLVLSHPITNK 982
            YQRP KPVPGDCGYHLHAH+LVLSHP TN+
Sbjct: 315  YQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344