BLASTX nr result

ID: Glycyrrhiza24_contig00015452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015452
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloro...   107   3e-21
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   107   5e-21
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   107   5e-21
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   102   1e-19

>ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 656

 Score =  107 bits (268), Expect = 3e-21
 Identities = 66/103 (64%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = +3

Query: 522 LKAIFRPSSSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRG 701
           LKAIFRPS +      NRPP S   SFLPELRRTKSFSASKNE  +  FEPQRKSCDVRG
Sbjct: 77  LKAIFRPSIAA----RNRPPPS---SFLPELRRTKSFSASKNEALSGFFEPQRKSCDVRG 129

Query: 702 RSTLYSLFSQDDERKIPKPEPPRVSDVETR-NLPSSSIVQGPV 827
           RSTL+SLF+Q         E     +VETR NLPSSS+VQ PV
Sbjct: 130 RSTLFSLFNQ---------EAAVAVEVETRHNLPSSSVVQKPV 163



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 274 NRPSTSCDRHPQENFTGFCPSCLCERLAVLD 366
           +RPSTSCDRHPQENFTGFCPSCLCERLAVLD
Sbjct: 24  HRPSTSCDRHPQENFTGFCPSCLCERLAVLD 54


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  107 bits (266), Expect = 5e-21
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 15/117 (12%)
 Frame = +3

Query: 522 LKAIFRPSSSTAP----RGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSC 689
           LKAIFRPS++ A      G N+P     +SFLPELRRTKSFSASKNE ++  FEPQRKSC
Sbjct: 71  LKAIFRPSATGAGPGGLSGRNKP-----SSFLPELRRTKSFSASKNEGFSGVFEPQRKSC 125

Query: 690 DVRGRSTLYSLFSQDDERKIPKPEPPRVSD------VETRNLP-----SSSIVQGPV 827
           DVR R+TL++LF+QDDER   K E PRVS+      +E    P     +SS+V+GPV
Sbjct: 126 DVRVRNTLWTLFTQDDERNPLKNEAPRVSNAAAGLHIEDERDPRILAAASSLVRGPV 182



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +1

Query: 274 NRPSTSCDRHPQENFTGFCPSCLCERLAVLD 366
           +RPSTSCDRHP+E FTGFCPSCLCERLAVL+
Sbjct: 16  HRPSTSCDRHPEERFTGFCPSCLCERLAVLE 46


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  107 bits (266), Expect = 5e-21
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 15/117 (12%)
 Frame = +3

Query: 522 LKAIFRPSSSTAP----RGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSC 689
           LKAIFRPS++ A      G N+P     +SFLPELRRTKSFSASKNE ++  FEPQRKSC
Sbjct: 71  LKAIFRPSATGAGPGGLSGRNKP-----SSFLPELRRTKSFSASKNEGFSGVFEPQRKSC 125

Query: 690 DVRGRSTLYSLFSQDDERKIPKPEPPRVSD------VETRNLP-----SSSIVQGPV 827
           DVR R+TL++LF+QDDER   K E PRVS+      +E    P     +SS+V+GPV
Sbjct: 126 DVRVRNTLWTLFTQDDERNPLKNEAPRVSNAAAGLHIEDERDPRILAAASSLVRGPV 182



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +1

Query: 274 NRPSTSCDRHPQENFTGFCPSCLCERLAVLD 366
           +RPSTSCDRHP+E FTGFCPSCLCERLAVL+
Sbjct: 16  HRPSTSCDRHPEERFTGFCPSCLCERLAVLE 46


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  103 bits (257), Expect = 5e-20
 Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
 Frame = +3

Query: 522 LKAIFRPS---SSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCD 692
           LKAIF+PS   SS+    NN    + S+SF PELRRTKSFSASKNE ++  FEPQRKSCD
Sbjct: 70  LKAIFKPSQLSSSSNNNNNNNNNNNKSSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCD 129

Query: 693 VRGRSTLYSLFSQDDER-----KIPKPEPPRVSDVETRNLPSSSIVQGPV 827
           VR R TL+SLF+QDDER     K P    P +  VE R   S S V+GPV
Sbjct: 130 VRERYTLWSLFTQDDERNPSVKKEPFKGGPEIEAVEPR--ISCSSVRGPV 177



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +1

Query: 274 NRPSTSCDRHPQENFTGFCPSCLCERLAVLD 366
           +R STSCDRHP+E+FTGFCPSCLCERLAVLD
Sbjct: 19  HRHSTSCDRHPEEHFTGFCPSCLCERLAVLD 49


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score =  102 bits (254), Expect = 1e-19
 Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
 Frame = +3

Query: 522 LKAIFRPSSSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRG 701
           LKAIF+PSSS  P            SF PELRRTKSFSASKNE ++  FEPQRKSCDVR 
Sbjct: 76  LKAIFKPSSSDRP------------SFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRV 123

Query: 702 RSTLYSLFSQDDERKIPKPEP----PRVSDVETRNLPSSSIVQGPV 827
           RSTL+SLF QDDE++ P  +     P + +VE+R + SSS+  GP+
Sbjct: 124 RSTLWSLFYQDDEQRNPSKKDSLKGPEIIEVESR-ISSSSVRGGPI 168



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = +1

Query: 274 NRPSTSCDRHPQENFTGFCPSCLCERLAVLD 366
           +RPSTSCDRHP+E+FTGFCPSCLCERLAVL+
Sbjct: 21  HRPSTSCDRHPEEHFTGFCPSCLCERLAVLE 51


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