BLASTX nr result

ID: Glycyrrhiza24_contig00015451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015451
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin...   275   9e-72
ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1...   238   2e-60
ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1...   236   8e-60
ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...   232   1e-58
ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group] g...   209   6e-52

>ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max]
           gi|255629065|gb|ACU14877.1| unknown [Glycine max]
          Length = 171

 Score =  275 bits (704), Expect = 9e-72
 Identities = 140/170 (82%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
 Frame = +2

Query: 263 VAMRGGRKNLKRATEEKHVTLQDGQSIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKS 442
           +AMRGGRKNLKRATEEKH+TLQDGQ I+QVVSLRG+N+IEVMDA G K LALFPAK QKS
Sbjct: 1   MAMRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKS 60

Query: 443 MWIKRGSFVVVDESGKEKALESGSKVACLVSQVLYHEQVRALQKSPEWPEIFKSGMVDDS 622
           MWIKRGSFVVVDESGKEKALESGSKVACLVSQVL+ +QVR L+KSPEWPE FKS MVDDS
Sbjct: 61  MWIKRGSFVVVDESGKEKALESGSKVACLVSQVLFSKQVRELEKSPEWPESFKSAMVDDS 120

Query: 623 NETTTSQQENEMDASDDDGLPPLEANTNRMRPFGSQA-DEDLESNSDTDD 769
            E+TTSQQE+E++ SDDDGLPPLEANTNR+RP   QA DED ES+SDTDD
Sbjct: 121 IESTTSQQEHELEGSDDDGLPPLEANTNRIRPAELQADDEDSESSSDTDD 170


>ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  238 bits (606), Expect = 2e-60
 Identities = 120/169 (71%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
 Frame = +2

Query: 269 MRGGRKNLKRATEEKHVTLQDGQSIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 448
           M+GGRKNL+RA+E    +L+DG SI+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 449 IKRGSFVVVDESGKEKALESGSKVACLVSQVLYHEQVRALQKSPEWPEIFKSGMVDDSNE 628
           IKRGSFVVVDESGK+ ALESGSKVAC+VS+VLY EQ+R LQKSPEWPEIFK+ +V D NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 629 TTTSQQ----ENEMDASDDDGLPPLEANTNRMRPFGSQADEDLESNSDT 763
              +Q     E+E+++SDDDGLPPLEANTNR +P   Q D + ES+SD+
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169


>ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  236 bits (601), Expect = 8e-60
 Identities = 119/169 (70%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
 Frame = +2

Query: 269 MRGGRKNLKRATEEKHVTLQDGQSIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 448
           M+GGRKNL+RA+E    +L+DG SI+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 449 IKRGSFVVVDESGKEKALESGSKVACLVSQVLYHEQVRALQKSPEWPEIFKSGMVDDSNE 628
           IKRGSFVVVDESGK+ ALESGSKVAC+VS+VLY EQ+R LQKSPEWPEIFK+ +V D +E
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRSE 120

Query: 629 TTTSQQ----ENEMDASDDDGLPPLEANTNRMRPFGSQADEDLESNSDT 763
              +Q     E+E+++SDDDGLPPLEANTNR +P   Q D + ES+SD+
Sbjct: 121 NLQAQNNQPVEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169


>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score =  232 bits (591), Expect = 1e-58
 Identities = 122/192 (63%), Positives = 146/192 (76%), Gaps = 27/192 (14%)
 Frame = +2

Query: 269 MRGGRKNLKRATEEKHVTLQDGQSIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 448
           M+GGRKNLKRA EE+ +TLQ+GQSI+QVVSLRG+NLIEVMDA GE SLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 449 IKRGSFVVVDESGKEKALESGSKVACLVSQVLYHEQVRALQKSPEWPEIFKSGMVDDSNE 628
           IK+GSFVVVDESG+EKA+ESGSKVAC+VSQVL++EQVR LQKS EWPEIFKS ++ DSN 
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKSTLLHDSNG 120

Query: 629 T---------------------------TTSQQENEMDASDDDGLPPLEANTNRMRPFGS 727
           T                           T+ Q+E+E  +SDDDGLPPLEAN NR+RP   
Sbjct: 121 TSLHSNTSQQEEFKSTARHDSNGNLHCSTSQQEEDESSSSDDDGLPPLEANMNRIRPLEL 180

Query: 728 QADEDLESNSDT 763
           Q++   +S+SD+
Sbjct: 181 QSNAVSDSDSDS 192


>ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group]
           gi|27476090|gb|AAO17021.1| Hypothetical protein [Oryza
           sativa Japonica Group] gi|108705834|gb|ABF93629.1|
           LOC496359 protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113547213|dbj|BAF10656.1|
           Os03g0114200 [Oryza sativa Japonica Group]
           gi|125542126|gb|EAY88265.1| hypothetical protein
           OsI_09718 [Oryza sativa Indica Group]
           gi|215765975|dbj|BAG98203.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624072|gb|EEE58204.1| hypothetical protein
           OsJ_09157 [Oryza sativa Japonica Group]
          Length = 167

 Score =  209 bits (533), Expect = 6e-52
 Identities = 107/167 (64%), Positives = 131/167 (78%), Gaps = 4/167 (2%)
 Frame = +2

Query: 269 MRGGRKNLKRATEEKHVTLQDGQSIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 448
           M+ GRKNL+RA  E  VTL +G+SI+QV++LRGSN+IEVMDA G KSLALFPAKFQKS W
Sbjct: 1   MKAGRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFW 60

Query: 449 IKRGSFVVVDESGKEKALESGSKVACLVSQVLYHEQVRALQKSPEWPEIFKS----GMVD 616
           IK G+FVVVD SG+++ALESGSK+AC+VSQVL+H+QVRA++KS EWP IFKS    G   
Sbjct: 61  IKNGNFVVVDASGRDQALESGSKIACVVSQVLFHDQVRAMEKSEEWPAIFKSTSKEGSEA 120

Query: 617 DSNETTTSQQENEMDASDDDGLPPLEANTNRMRPFGSQADEDLESNS 757
            + E T  Q E E D+ +DD LPPLEANTNR RPF   AD + +S+S
Sbjct: 121 GTQEGTRPQIEEEPDSDEDDDLPPLEANTNRQRPFELYADSESDSDS 167


Top