BLASTX nr result

ID: Glycyrrhiza24_contig00015450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015450
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin...   273   3e-71
ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1...   234   1e-59
ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1...   234   2e-59
ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...   225   9e-57
ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subs...   205   1e-50

>ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max]
           gi|255629065|gb|ACU14877.1| unknown [Glycine max]
          Length = 171

 Score =  273 bits (699), Expect = 3e-71
 Identities = 139/170 (81%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
 Frame = +3

Query: 192 VAMRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKS 371
           +AMRGGRKNLKRATEEKH+TLQDGQ I+QVVSLRG+N+IEVMDA G K LALFPAK QKS
Sbjct: 1   MAMRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKS 60

Query: 372 MWIKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDS 551
           MWIKRGSFVV DESGKEKALESGSKVACLVSQVL+ +QVR L+KSPEWPE FKS MVDDS
Sbjct: 61  MWIKRGSFVVVDESGKEKALESGSKVACLVSQVLFSKQVRELEKSPEWPESFKSAMVDDS 120

Query: 552 IEKITSQQENEMDASDDDGLPPLEANTNRMRPFGWQA-DEDLESNSDTDD 698
           IE  TSQQE+E++ SDDDGLPPLEANTNR+RP   QA DED ES+SDTDD
Sbjct: 121 IESTTSQQEHELEGSDDDGLPPLEANTNRIRPAELQADDEDSESSSDTDD 170


>ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  234 bits (598), Expect = 1e-59
 Identities = 117/169 (69%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
 Frame = +3

Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377
           M+GGRKNL+RA+E    +L+DG +I+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDSIE 557
           IKRGSFVV DESGK+ ALESGSKVAC+VS+VLY+EQ+R LQKSPEWPEIFK+ +V D  E
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRSE 120

Query: 558 KITSQQ----ENEMDASDDDGLPPLEANTNRMRPFGWQADEDLESNSDT 692
            + +Q     E+E+++SDDDGLPPLEANTNR +P   Q D + ES+SD+
Sbjct: 121 NLQAQNNQPVEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169


>ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  234 bits (597), Expect = 2e-59
 Identities = 117/169 (69%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
 Frame = +3

Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377
           M+GGRKNL+RA+E    +L+DG +I+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDSIE 557
           IKRGSFVV DESGK+ ALESGSKVAC+VS+VLY+EQ+R LQKSPEWPEIFK+ +V D  E
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 558 KITSQQ----ENEMDASDDDGLPPLEANTNRMRPFGWQADEDLESNSDT 692
            + +Q     E+E+++SDDDGLPPLEANTNR +P   Q D + ES+SD+
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169


>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score =  225 bits (574), Expect = 9e-57
 Identities = 121/192 (63%), Positives = 144/192 (75%), Gaps = 27/192 (14%)
 Frame = +3

Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377
           M+GGRKNLKRA EE+ +TLQ+GQ+I+QVVSLRG+NLIEVMDA GE SLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDD--- 548
           IK+GSFVV DESG+EKA+ESGSKVAC+VSQVL+YEQVR LQKS EWPEIFKS ++ D   
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKSTLLHDSNG 120

Query: 549 -SIEKITSQQ-----------------------ENEMDASDDDGLPPLEANTNRMRPFGW 656
            S+   TSQQ                       E+E  +SDDDGLPPLEAN NR+RP   
Sbjct: 121 TSLHSNTSQQEEFKSTARHDSNGNLHCSTSQQEEDESSSSDDDGLPPLEANMNRIRPLEL 180

Query: 657 QADEDLESNSDT 692
           Q++   +S+SD+
Sbjct: 181 QSNAVSDSDSDS 192


>ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325730|gb|EFH56150.1| RNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 171

 Score =  205 bits (522), Expect = 1e-50
 Identities = 106/170 (62%), Positives = 130/170 (76%), Gaps = 4/170 (2%)
 Frame = +3

Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377
           M  GR+NLK+A  E+  TL++ Q+I QVVSLRGSN IE+MDA GE SLALFPAKF++SMW
Sbjct: 1   MNRGRRNLKQAASEQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMW 60

Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGM---VDD 548
           I+RGSFVV D +GKEKA ESGSKV  +V +VL++EQVR LQKSPEWPEIFK       D 
Sbjct: 61  IRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTKPIPADK 120

Query: 549 SIEKITSQQENEMDAS-DDDGLPPLEANTNRMRPFGWQADEDLESNSDTD 695
           S      + + E+D+S DDDG+PPLEANTNR+RPFG Q D + +S SD+D
Sbjct: 121 SSPIEQHEDDGEIDSSDDDDGMPPLEANTNRLRPFGVQCDAETDSGSDSD 170


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