BLASTX nr result
ID: Glycyrrhiza24_contig00015450
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00015450 (880 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin... 273 3e-71 ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1... 234 1e-59 ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1... 234 2e-59 ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1... 225 9e-57 ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subs... 205 1e-50 >ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max] gi|255629065|gb|ACU14877.1| unknown [Glycine max] Length = 171 Score = 273 bits (699), Expect = 3e-71 Identities = 139/170 (81%), Positives = 152/170 (89%), Gaps = 1/170 (0%) Frame = +3 Query: 192 VAMRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKS 371 +AMRGGRKNLKRATEEKH+TLQDGQ I+QVVSLRG+N+IEVMDA G K LALFPAK QKS Sbjct: 1 MAMRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKS 60 Query: 372 MWIKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDS 551 MWIKRGSFVV DESGKEKALESGSKVACLVSQVL+ +QVR L+KSPEWPE FKS MVDDS Sbjct: 61 MWIKRGSFVVVDESGKEKALESGSKVACLVSQVLFSKQVRELEKSPEWPESFKSAMVDDS 120 Query: 552 IEKITSQQENEMDASDDDGLPPLEANTNRMRPFGWQA-DEDLESNSDTDD 698 IE TSQQE+E++ SDDDGLPPLEANTNR+RP QA DED ES+SDTDD Sbjct: 121 IESTTSQQEHELEGSDDDGLPPLEANTNRIRPAELQADDEDSESSSDTDD 170 >ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis sativus] Length = 169 Score = 234 bits (598), Expect = 1e-59 Identities = 117/169 (69%), Positives = 142/169 (84%), Gaps = 4/169 (2%) Frame = +3 Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377 M+GGRKNL+RA+E +L+DG +I+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW Sbjct: 1 MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60 Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDSIE 557 IKRGSFVV DESGK+ ALESGSKVAC+VS+VLY+EQ+R LQKSPEWPEIFK+ +V D E Sbjct: 61 IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRSE 120 Query: 558 KITSQQ----ENEMDASDDDGLPPLEANTNRMRPFGWQADEDLESNSDT 692 + +Q E+E+++SDDDGLPPLEANTNR +P Q D + ES+SD+ Sbjct: 121 NLQAQNNQPVEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169 >ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis sativus] Length = 169 Score = 234 bits (597), Expect = 2e-59 Identities = 117/169 (69%), Positives = 142/169 (84%), Gaps = 4/169 (2%) Frame = +3 Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377 M+GGRKNL+RA+E +L+DG +I+QVVS+RGSNLIEVMDA GEKSLALFPAKFQKSMW Sbjct: 1 MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60 Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDDSIE 557 IKRGSFVV DESGK+ ALESGSKVAC+VS+VLY+EQ+R LQKSPEWPEIFK+ +V D E Sbjct: 61 IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120 Query: 558 KITSQQ----ENEMDASDDDGLPPLEANTNRMRPFGWQADEDLESNSDT 692 + +Q E+E+++SDDDGLPPLEANTNR +P Q D + ES+SD+ Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169 >ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis vinifera] Length = 192 Score = 225 bits (574), Expect = 9e-57 Identities = 121/192 (63%), Positives = 144/192 (75%), Gaps = 27/192 (14%) Frame = +3 Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377 M+GGRKNLKRA EE+ +TLQ+GQ+I+QVVSLRG+NLIEVMDA GE SLALFPAKFQKSMW Sbjct: 1 MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60 Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGMVDD--- 548 IK+GSFVV DESG+EKA+ESGSKVAC+VSQVL+YEQVR LQKS EWPEIFKS ++ D Sbjct: 61 IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKSTLLHDSNG 120 Query: 549 -SIEKITSQQ-----------------------ENEMDASDDDGLPPLEANTNRMRPFGW 656 S+ TSQQ E+E +SDDDGLPPLEAN NR+RP Sbjct: 121 TSLHSNTSQQEEFKSTARHDSNGNLHCSTSQQEEDESSSSDDDGLPPLEANMNRIRPLEL 180 Query: 657 QADEDLESNSDT 692 Q++ +S+SD+ Sbjct: 181 QSNAVSDSDSDS 192 >ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata] gi|297325730|gb|EFH56150.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata] Length = 171 Score = 205 bits (522), Expect = 1e-50 Identities = 106/170 (62%), Positives = 130/170 (76%), Gaps = 4/170 (2%) Frame = +3 Query: 198 MRGGRKNLKRATEEKHVTLQDGQNIVQVVSLRGSNLIEVMDAHGEKSLALFPAKFQKSMW 377 M GR+NLK+A E+ TL++ Q+I QVVSLRGSN IE+MDA GE SLALFPAKF++SMW Sbjct: 1 MNRGRRNLKQAASEQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMW 60 Query: 378 IKRGSFVVADESGKEKALESGSKVACLVSQVLYYEQVRALQKSPEWPEIFKSGM---VDD 548 I+RGSFVV D +GKEKA ESGSKV +V +VL++EQVR LQKSPEWPEIFK D Sbjct: 61 IRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTKPIPADK 120 Query: 549 SIEKITSQQENEMDAS-DDDGLPPLEANTNRMRPFGWQADEDLESNSDTD 695 S + + E+D+S DDDG+PPLEANTNR+RPFG Q D + +S SD+D Sbjct: 121 SSPIEQHEDDGEIDSSDDDDGMPPLEANTNRLRPFGVQCDAETDSGSDSD 170