BLASTX nr result

ID: Glycyrrhiza24_contig00015399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015399
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula...   119   3e-25
ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Gly...   113   3e-23
ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Gly...   107   1e-21
ref|XP_002302948.1| high mobility group family [Populus trichoca...    94   2e-17
ref|XP_002305213.1| high mobility group family [Populus trichoca...    91   1e-16

>ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula]
           gi|355489775|gb|AES70978.1| HMG-Y-related protein A
           [Medicago truncatula]
          Length = 184

 Score =  119 bits (299), Expect = 3e-25
 Identities = 72/146 (49%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
 Frame = -2

Query: 611 KYIESAYGGLPQGHKALLNLHLAKMRDSGELVFWKNNYTK---XXXXXXXXXXXXXXXXX 441
           KYIES YGGLPQGHK LLNLHLA+MRDSGELVFWKNNYTK                    
Sbjct: 40  KYIESTYGGLPQGHKVLLNLHLARMRDSGELVFWKNNYTKRDPNAPPRRGRGRPPKAKES 99

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXXXXXKVKASTGNGRPRGRPRKMARPTGGFGG---APQ 270
                                      ++KA  G GRPRGRPRKM+RPTG F G      
Sbjct: 100 FSSGAMYSQPKPRGRPPKDPNGPPKSPQMKAPVGTGRPRGRPRKMSRPTGAFDGPLPLAL 159

Query: 269 STVETERPRGRPPKMKSPSLTTEITA 192
            T  + RPRGRPPKMKS +L  EI A
Sbjct: 160 GTGGSGRPRGRPPKMKSTTL-AEINA 184


>ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 182

 Score =  113 bits (282), Expect = 3e-23
 Identities = 71/145 (48%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = -2

Query: 611 KYIESAYGGLPQGHKALLNLHLAKMRDSGELVFWKNNYTK-XXXXXXXXXXXXXXXXXXX 435
           KYIES YGGLPQGHK LLN+HLAKMRDSG LVFWKNNYTK                    
Sbjct: 40  KYIESTYGGLPQGHKVLLNVHLAKMRDSGVLVFWKNNYTKRDPKAPPRRGRGRPPKPKEP 99

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXKVKASTGNGRPRGRPRKMARPTGGFGGA-PQSTVE 258
                                      KA T +GRPRGRPRKM RPTGG   A P S V+
Sbjct: 100 LPPGTVLSPPRPKGRPPKDPNDPGKPPKALTESGRPRGRPRKMTRPTGGLSEASPASKVK 159

Query: 257 TE---RPRGRPPKMKSPSLTTEITA 192
                RPRGRPPK+K   + TEI+A
Sbjct: 160 ASTSGRPRGRPPKVK--PVFTEISA 182


>ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 184

 Score =  107 bits (268), Expect = 1e-21
 Identities = 67/146 (45%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
 Frame = -2

Query: 611 KYIESAYGGLPQGHKALLNLHLAKMRDSGELVFWKNNYTK-XXXXXXXXXXXXXXXXXXX 435
           KYIES YGGLPQ HK LLN+HLAKMR+SG LVFWKNNYTK                    
Sbjct: 40  KYIESTYGGLPQAHKVLLNVHLAKMRESGVLVFWKNNYTKRDPNAPPRRGRGRPPKPKEP 99

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXKVKAS-TGNGRPRGRPRKMARPTGGFGGAPQST-- 264
                                     +KAS  G+GRPRGRPRKMA PTGG G   Q++  
Sbjct: 100 LPPGTVLSPPRPRGRPSKDPNDLQKPLKASVVGSGRPRGRPRKMAWPTGGLGEVSQASKA 159

Query: 263 ---VETERPRGRPPKMKSPSLTTEIT 195
                  RPRGRPPK+K  ++ TEI+
Sbjct: 160 KPVTSNGRPRGRPPKVK--AVFTEIS 183


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 60/145 (41%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
 Frame = -2

Query: 611 KYIESAYGGLPQGHKALLNLHLAKMRDSGELVFWKNNYTK---XXXXXXXXXXXXXXXXX 441
           KYIES YG LP GH ALL+ HL +M+D+GELVFWKNNY K                    
Sbjct: 39  KYIESKYGDLPAGHTALLSHHLNRMKDTGELVFWKNNYMKPDPNAPPRRGRGRPPKPKDP 98

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXXXXXKVKASTG-NGRPRGRPRKMARPTGGF------- 285
                                      K KA+TG +G+PRGRPRKMARPTGG        
Sbjct: 99  LSPGSDLPPARPRGRPPKDPNAPPKPVKPKAATGRSGKPRGRPRKMARPTGGITTGTATT 158

Query: 284 GGAPQSTVETERPRGRPPKMKSPSL 210
             A   T  + RPRGRPPK+K+ ++
Sbjct: 159 TSAVPMTAGSGRPRGRPPKVKAATM 183


>ref|XP_002305213.1| high mobility group family [Populus trichocarpa]
           gi|222848177|gb|EEE85724.1| high mobility group family
           [Populus trichocarpa]
          Length = 189

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 59/145 (40%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
 Frame = -2

Query: 611 KYIESAYGGLPQGHKALLNLHLAKMRDSGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXX 432
           KYIES +G LP GH ALL  HL +M D+GEL+F KNNY K                    
Sbjct: 39  KYIESKHGNLPAGHTALLAHHLNRMTDTGELMFLKNNYMKPDPNAPPRRGRGRPPKPKDP 98

Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXKV---KAST-GNGRPRGRPRKMARPTGGFGGAPQS- 267
                                   K    KA+T G+G+PRGRPRKMARPTGG  G P + 
Sbjct: 99  LAPPADLAPARPRGRPPKDPNAPPKPVKPKATTAGSGKPRGRPRKMARPTGGITGTPTAT 158

Query: 266 -----TVETERPRGRPPKMKSPSLT 207
                T  + RPRGRPPK+K+ ++T
Sbjct: 159 SAVPMTTGSGRPRGRPPKVKAAAMT 183


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