BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015378
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14894.3| unnamed protein product [Vitis vinifera]              249   2e-64
ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-64
ref|XP_003614153.1| Pentatricopeptide repeat-containing protein ...   245   2e-63
ref|XP_002516878.1| pentatricopeptide repeat-containing protein,...   245   2e-63
ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containi...   245   3e-63

>emb|CBI14894.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  249 bits (636), Expect = 2e-64
 Identities = 123/163 (75%), Positives = 142/163 (87%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488  LMMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGG 309
            LM+++K+ GT VTFNIL+DGFAKQG YMEARDVI EFGK+G QPTVMTYNMLMNAYARGG
Sbjct: 514  LMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGG 573

Query: 308  QHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKRAFFCHKQMVKSGQVMDYSSYQ 129
            QHS+LPQLL EM + NLKPDS+TYSTMIYA+V V+DFKRAFF HKQMVKSGQV D  SYQ
Sbjct: 574  QHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQ 633

Query: 128  KLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKR-KKDEFW 3
            KLR++L+VKA  KNRKDR A+LGI+ S M ++K K+ KKDEFW
Sbjct: 634  KLRSILDVKAATKNRKDRSAILGIVNSNMGLLKPKKGKKDEFW 676



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 49/90 (54%)
 Frame = -3

Query: 485 MMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGGQ 306
           M  + +    + +N L+D ++K  +  EA  +  E    G+ PT  TYN+LM+AY+R  Q
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQ 398

Query: 305 HSKLPQLLNEMAAHNLKPDSVTYSTMIYAF 216
              +  LL EM    L+P+  +Y+ +I A+
Sbjct: 399 PEIIENLLLEMQDMGLEPNVKSYTCLISAY 428


>ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
            chloroplastic [Vitis vinifera]
            gi|147821419|emb|CAN76897.1| hypothetical protein
            VITISV_010606 [Vitis vinifera]
          Length = 692

 Score =  249 bits (636), Expect = 2e-64
 Identities = 123/163 (75%), Positives = 142/163 (87%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488  LMMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGG 309
            LM+++K+ GT VTFNIL+DGFAKQG YMEARDVI EFGK+G QPTVMTYNMLMNAYARGG
Sbjct: 514  LMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGG 573

Query: 308  QHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKRAFFCHKQMVKSGQVMDYSSYQ 129
            QHS+LPQLL EM + NLKPDS+TYSTMIYA+V V+DFKRAFF HKQMVKSGQV D  SYQ
Sbjct: 574  QHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQ 633

Query: 128  KLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKR-KKDEFW 3
            KLR++L+VKA  KNRKDR A+LGI+ S M ++K K+ KKDEFW
Sbjct: 634  KLRSILDVKAATKNRKDRSAILGIVNSNMGLLKPKKGKKDEFW 676



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 49/90 (54%)
 Frame = -3

Query: 485 MMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGGQ 306
           M  + +    + +N L+D ++K  +  EA  +  E    G+ PT  TYN+LM+AY+R  Q
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQ 398

Query: 305 HSKLPQLLNEMAAHNLKPDSVTYSTMIYAF 216
              +  LL EM    L+P+  +Y+ +I A+
Sbjct: 399 PEIIENLLLEMQDMGLEPNVKSYTCLISAY 428


>ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515488|gb|AES97111.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 691

 Score =  245 bits (626), Expect = 2e-63
 Identities = 120/162 (74%), Positives = 140/162 (86%)
 Frame = -3

Query: 488  LMMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGG 309
            LMM+EKV GT VTFNILVDGFAKQG +MEARDVISEFGK+GLQPTVMTYNML+NAYARGG
Sbjct: 520  LMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGG 579

Query: 308  QHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKRAFFCHKQMVKSGQVMDYSSYQ 129
              S +PQLL EM A  L+PDS+TYST+IYAFV V+DFKRAFF HK+MVKSG VMD SSY+
Sbjct: 580  LDSNIPQLLKEMEALRLRPDSITYSTVIYAFVRVRDFKRAFFYHKEMVKSGYVMDISSYR 639

Query: 128  KLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKRKKDEFW 3
            KLRA+L+VK  +KN+ D++A+ GII  +M  MK+KRKKDEFW
Sbjct: 640  KLRAILDVKVADKNKSDKVAMYGIINKQMGFMKNKRKKDEFW 681



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/90 (32%), Positives = 50/90 (55%)
 Frame = -3

Query: 485 MMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGGQ 306
           M  + +    + +N L+D + K  +  EA  +  E    G++PT +T+N+LM AY+R  Q
Sbjct: 345 MEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQ 404

Query: 305 HSKLPQLLNEMAAHNLKPDSVTYSTMIYAF 216
              +  LL EM    LKP++ +Y+ +I A+
Sbjct: 405 PKIVESLLAEMKDFGLKPNANSYTCLISAY 434


>ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543966|gb|EEF45492.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 714

 Score =  245 bits (626), Expect = 2e-63
 Identities = 124/164 (75%), Positives = 141/164 (85%), Gaps = 2/164 (1%)
 Frame = -3

Query: 488  LMMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGG 309
            +MM+EKV GT VTFNIL+DGFAKQG Y+EARDVISEFGK+GL PTVMTYNMLMNAYARGG
Sbjct: 534  MMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGG 593

Query: 308  QHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKRAFFCHKQMVKSGQVMDYSSYQ 129
            QHSKLPQLL EMA  NLKPDS+TY TMIYA++ V+DF+RAFF HK MVKSGQV D  SY+
Sbjct: 594  QHSKLPQLLKEMATLNLKPDSITYLTMIYAYIRVRDFRRAFFYHKTMVKSGQVPDAKSYE 653

Query: 128  KLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKR--KKDEFW 3
            KLRA+LE K+  KNRKDR A+LGII SKM ++K K+  KKDEFW
Sbjct: 654  KLRAILEAKSKIKNRKDRSAILGIINSKMGMLKAKKKGKKDEFW 697



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/90 (33%), Positives = 50/90 (55%)
 Frame = -3

Query: 485 MMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGGQ 306
           M  +      + +N L+D + K  Q  E   + +E    GL+PT  T+N+LM+AY+R  Q
Sbjct: 359 MAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQ 418

Query: 305 HSKLPQLLNEMAAHNLKPDSVTYSTMIYAF 216
              + +LL EM    L+PD+ +Y+ +I A+
Sbjct: 419 PEIVEELLLEMQDAGLQPDAKSYTCLISAY 448


>ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
            chloroplastic-like [Cucumis sativus]
          Length = 708

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/164 (75%), Positives = 141/164 (85%), Gaps = 2/164 (1%)
 Frame = -3

Query: 488  LMMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGG 309
            LM+ EKV+GT VTFN L+DGFAK G Y+EARDVISEF K+GLQPTVMTYNMLMNAYARGG
Sbjct: 530  LMIREKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGG 589

Query: 308  QHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKRAFFCHKQMVKSGQVMDYSSYQ 129
            QH KLPQLL EMAA +LKPDSVTYSTMIYAFV V+DFKRAFF HK+MVKSGQV D  SYQ
Sbjct: 590  QHLKLPQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQ 649

Query: 128  KLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKR--KKDEFW 3
            KL+++L+VK   KNRKD+ A+LGII SKM ++K K+  KKDEFW
Sbjct: 650  KLKSILDVKLATKNRKDKSAILGIINSKMGMVKAKKQGKKDEFW 693



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/90 (34%), Positives = 52/90 (57%)
 Frame = -3

Query: 485 MMNEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVMTYNMLMNAYARGGQ 306
           M  + V    + +N ++D F+K  Q  EA  V +E    G++PT  ++N+LMNAY+R  Q
Sbjct: 355 MEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQ 414

Query: 305 HSKLPQLLNEMAAHNLKPDSVTYSTMIYAF 216
              + +LL EM    L+P+  +Y+ +I A+
Sbjct: 415 PEIVEKLLVEMKDMGLEPNVKSYTCLISAY 444