BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015376
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   195   3e-48
gb|AFK43257.1| unknown [Lotus japonicus]                              167   6e-40
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   152   3e-35
ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   146   2e-33
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   120   9e-26

>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  195 bits (496), Expect = 3e-48
 Identities = 104/138 (75%), Positives = 114/138 (82%), Gaps = 4/138 (2%)
 Frame = -1

Query: 404 MLTLPSCGCCRVSIARAFQFQTPPLPSRSLFLSATKNHKFRCGIPSAGN----DSDSDGE 237
           ML+  SCGCCRVS +RAFQFQ    PS SLFLSAT ++KFR    SA +    DSDSDGE
Sbjct: 1   MLSFHSCGCCRVSASRAFQFQFQTAPSPSLFLSAT-SYKFRSATASAASGSAGDSDSDGE 59

Query: 236 PKSNYAGVRLEETVDGGIKSGKVRLDSWISSRINGISRARVQSSIKEGLVHVNGRVVDKV 57
           PK N++GVRLEE VD  I SGK+RLD+WISSRINGISRARVQSSIK GLVHVNGRVVDKV
Sbjct: 60  PKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRINGISRARVQSSIKSGLVHVNGRVVDKV 119

Query: 56  SFNVKAGDEIKCTIAELQ 3
           SFNVK+GDEIKCTIAELQ
Sbjct: 120 SFNVKSGDEIKCTIAELQ 137


>gb|AFK43257.1| unknown [Lotus japonicus]
          Length = 209

 Score =  167 bits (424), Expect = 6e-40
 Identities = 96/140 (68%), Positives = 105/140 (75%), Gaps = 6/140 (4%)
 Frame = -1

Query: 404 MLTLPSCGCCRVSIARAFQFQTPPLPSRSLFLSATKNHKFRCGIPSAGN------DSDSD 243
           M+ L S G CRVS  RAF+FQTP  PS  L  SAT N K R  I  A +      DS   
Sbjct: 1   MILLHSSGYCRVSTPRAFKFQTPLSPS--LLFSAT-NSKSRSAIARASSGFADNSDSGDG 57

Query: 242 GEPKSNYAGVRLEETVDGGIKSGKVRLDSWISSRINGISRARVQSSIKEGLVHVNGRVVD 63
           GEP++NYAGV+LEE VD  I SGK RLDSWIS+RINGISRARVQSSIK GLVHVNGRVV+
Sbjct: 58  GEPRANYAGVQLEEIVDNRIGSGKPRLDSWISTRINGISRARVQSSIKSGLVHVNGRVVN 117

Query: 62  KVSFNVKAGDEIKCTIAELQ 3
           KVSFNVK+GDEIKCTIAELQ
Sbjct: 118 KVSFNVKSGDEIKCTIAELQ 137


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  152 bits (384), Expect = 3e-35
 Identities = 98/151 (64%), Positives = 105/151 (69%), Gaps = 17/151 (11%)
 Frame = -1

Query: 404 MLTL-PSCGCCRVSIA-RAFQFQTPPLPSRSLFLSATKNHKFRCGIPSA----GNDSDSD 243
           ML+L  SCG C VS + +AFQF      S   F S   N K R  I  +     NDS+S 
Sbjct: 1   MLSLNTSCGFCGVSTSTKAFQFHFRT-SSSPFFFSPLNNFKLRSSIAKSFSTFSNDSNSS 59

Query: 242 GE-PKSNYAGVRLEETV-DGGIKSGKVRLDSWISSRINGISRARVQSSIKEGLVHVNGRV 69
            E PKSNYAGV LEE V DGGIKSGK+RLDSWISSRINGISRARVQSSIK GLVHVNGRV
Sbjct: 60  TEEPKSNYAGVLLEEIVHDGGIKSGKLRLDSWISSRINGISRARVQSSIKAGLVHVNGRV 119

Query: 68  VDK---------VSFNVKAGDEIKCTIAELQ 3
           VDK         VSFNV+AGDEIKCTIAELQ
Sbjct: 120 VDKLSIVVILEQVSFNVRAGDEIKCTIAELQ 150


>ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Glycine max]
          Length = 441

 Score =  146 bits (368), Expect = 2e-33
 Identities = 83/119 (69%), Positives = 95/119 (79%), Gaps = 9/119 (7%)
 Frame = -1

Query: 332 LPSRSL---FLSATKNHKFRCGIPSAGN----DSDSDGEPKSNYAGVRLEETVDGGIKSG 174
           +P+R+    FLSAT ++KF     SA +    D+DSDGEPK N++GVRLEE VD  I SG
Sbjct: 14  IPNRTFSFSFLSAT-SYKFISATASAASGSAGDTDSDGEPKLNFSGVRLEEAVDSRIGSG 72

Query: 173 KVRLDSWISSRINGISRARVQSSIKEGLVHVNGRVVDKVSFNVKAGDEIKCT--IAELQ 3
           K+RLD+WISSRINGI RARVQSSIK GLVHVNGRVVDKVSFNVK+GDEIKCT  IAELQ
Sbjct: 73  KLRLDNWISSRINGIRRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAIAELQ 131


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  120 bits (302), Expect = 9e-26
 Identities = 72/134 (53%), Positives = 82/134 (61%), Gaps = 11/134 (8%)
 Frame = -1

Query: 371 VSIARAFQFQTPPLPSRSLF-----------LSATKNHKFRCGIPSAGNDSDSDGEPKSN 225
           +S+  A   Q  P P    F           L  + N   RC        S++  E  +N
Sbjct: 2   ISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCS-SDYDEYSEAQSERIAN 60

Query: 224 YAGVRLEETVDGGIKSGKVRLDSWISSRINGISRARVQSSIKEGLVHVNGRVVDKVSFNV 45
           YAG RLEETVD  +  GKVRLDSWIS RINGISRARVQSSI+ GLV VNGRV+DKVS NV
Sbjct: 61  YAGTRLEETVD--VNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNV 118

Query: 44  KAGDEIKCTIAELQ 3
           KAGD I CTI+ELQ
Sbjct: 119 KAGDVINCTISELQ 132