BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015363
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55
ref|XP_003603974.1| Pentatricopeptide repeat-containing protein ...   219   2e-55
ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-53
gb|AAS79604.1| putative pentatricopeptide repeat-containing prot...   194   8e-48
ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47

>ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 572

 Score =  220 bits (560), Expect = 1e-55
 Identities = 109/145 (75%), Positives = 125/145 (86%), Gaps = 2/145 (1%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           +H YSEFG+L +AR+LFDRMP RDVVSWTSMI GLVNHD P+EAI LFERML+ G+EVN+
Sbjct: 137 LHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERMLQCGVEVNE 196

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRID--SETNVCTALIDMYAKSGCIESAREVF 133
           ATV+SVLRACADSGALSMGRKVH  + E  I+  S++NV TAL+DMYAK GCI SAR+VF
Sbjct: 197 ATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGCIASARKVF 256

Query: 132 DGVVEKDVFVWTAMISGLACHGLCK 58
           D VV +DVFVWTAMISGLA HGLCK
Sbjct: 257 DDVVHRDVFVWTAMISGLASHGLCK 281



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           +  Y++ G +  AR +FD +  RDV  WT+MI GL +H    +AI +F  M  +G++ ++
Sbjct: 240 VDMYAKGGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDE 299

Query: 306 ATVVSVLRACADSGALSMGRKV-HEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFD 130
            TV +VL AC ++G +  G  +  ++ R   +         L+D+ A++G ++ A +  +
Sbjct: 300 RTVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVN 359

Query: 129 GV-VEKDVFVWTAMISGLACHG 67
            + +E D  +W  +I     HG
Sbjct: 360 AMPIEPDTVLWRTLIWACKVHG 381



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/139 (25%), Positives = 63/139 (45%)
 Frame = -3

Query: 480 AYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVNDAT 301
           A S FG+L  AR L    P  +   + +++        P          L      ++ T
Sbjct: 38  ALSPFGDLNYARLLLSTNPTLNSYYYNTLLRAFSQTPLPTPPFHALSLFLSMPSPPDNFT 97

Query: 300 VVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDGVV 121
              +L+ C+ S    +G+++H ++ +     +  +   L+ MY++ G +  AR +FD + 
Sbjct: 98  FPFLLKCCSRSKLPPLGKQLHALLTKLGFAPDLYIQNVLLHMYSEFGDLLLARSLFDRMP 157

Query: 120 EKDVFVWTAMISGLACHGL 64
            +DV  WT+MI GL  H L
Sbjct: 158 HRDVVSWTSMIGGLVNHDL 176


>ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493022|gb|AES74225.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 566

 Score =  219 bits (558), Expect = 2e-55
 Identities = 104/143 (72%), Positives = 122/143 (85%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           IH YSE GEL +AR +FDRM  RDVVSWTSMI G VNH   +EAI+LF+RMLE G++VN+
Sbjct: 133 IHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNE 192

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDG 127
           ATV+SVLR CADSGALS+GRKVH IV+EK ID + NVCTALI MY+K GC+ESAREVFD 
Sbjct: 193 ATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDD 252

Query: 126 VVEKDVFVWTAMISGLACHGLCK 58
           V+++DVFVWTAMI GLACHG+CK
Sbjct: 253 VLDRDVFVWTAMIYGLACHGMCK 275



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           IH YS+ G L  AR +FD + +RDV  WT+MI GL  H    EAI+LF  M    ++ ++
Sbjct: 234 IHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDE 293

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNV--CTALIDMYAKSGCIESAREVF 133
            T++ VL A  ++G +  G      V +KR   + N+     ++D+ AK GC+E A +  
Sbjct: 294 RTIMVVLSAYRNAGLVREGYMFFNDV-QKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFI 352

Query: 132 DGV-VEKDVFVWTAMISGLACH 70
           + + ++ D  +W  +I     H
Sbjct: 353 NAMPMKPDAVIWRTLIWACKVH 374



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
 Frame = -3

Query: 480 AYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRP---IEAIKLFERMLEAGIEV- 313
           A S  G+L  AR L +  P  +   + ++I    +   P    +A+ LF  ML+    V 
Sbjct: 28  AQSPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVP 87

Query: 312 --NDATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESARE 139
             +  T    L++C         +++H  + +     +  +  ALI MY++ G +  AR+
Sbjct: 88  KPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQ 147

Query: 138 VFDGVVEKDVFVWTAMISGLACHGL 64
           VFD +  +DV  WT+MI+G   H L
Sbjct: 148 VFDRMSHRDVVSWTSMIAGFVNHHL 172


>ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 542

 Score =  211 bits (537), Expect = 5e-53
 Identities = 107/145 (73%), Positives = 124/145 (85%), Gaps = 2/145 (1%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           +H YSEFG+L +AR+LFDRMP RDVVSWTSMI GLVNHD P+EAI LFERML+ G+EVN+
Sbjct: 109 VHMYSEFGDLVLARSLFDRMPHRDVVSWTSMISGLVNHDLPVEAISLFERMLQCGVEVNE 168

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRID--SETNVCTALIDMYAKSGCIESAREVF 133
           ATV+SVLRA ADSGALSMGRKVH  + E  I+  S++NV TAL+DMYAKSGCI   R+VF
Sbjct: 169 ATVISVLRARADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKSGCI--VRKVF 226

Query: 132 DGVVEKDVFVWTAMISGLACHGLCK 58
           D VV++DVFVWTAMISGLA HGLCK
Sbjct: 227 DDVVDRDVFVWTAMISGLASHGLCK 251



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
 Frame = -3

Query: 453 VARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVNDATVVSVLRACA 274
           + R +FD + +RDV  WT+MI GL +H    +AI +F  M  +G++ ++ TV +VL AC 
Sbjct: 221 IVRKVFDDVVDRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTTVLTACR 280

Query: 273 DSGALSMGRKV-HEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDGV-VEKDVFVW 100
           ++G +  G  +  ++ R   +         L+D+ A++G ++ A +  + + +E D  +W
Sbjct: 281 NAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDAVLW 340

Query: 99  TAMISGLACHG 67
             +I     HG
Sbjct: 341 RTLIWACKVHG 351


>gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
           trifida] gi|118562903|dbj|BAF37793.1| hypothetical
           protein [Ipomoea trifida]
          Length = 575

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/142 (64%), Positives = 112/142 (78%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           IH YS  GE  +A  +FD+MP+RDVVSWTS+IDG V++DRPIEAI+LF  M+E GIE N+
Sbjct: 143 IHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNE 202

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDG 127
            TV SVLRACAD+GAL+ G ++H  V+EK   S  NV TALIDMYAK GCI+ A EVFD 
Sbjct: 203 VTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDE 262

Query: 126 VVEKDVFVWTAMISGLACHGLC 61
            +EKDV+VWTA+I+GLA HGLC
Sbjct: 263 TLEKDVYVWTAIIAGLASHGLC 284



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/136 (27%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           I  Y++ G +  A  +FD   E+DV  WT++I GL +H   ++AI+ FE M ++ +++++
Sbjct: 244 IDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDE 303

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDG 127
             + +VL A  ++G +S G      +++ +I         ++DM  ++G ++ A E    
Sbjct: 304 RAITAVLSAYRNAGLVSEGLLFFRRLKKHKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRK 363

Query: 126 V-VEKDVFVWTAMISG 82
           + +E D  +W  +I G
Sbjct: 364 MPIEPDAVLWRTLIWG 379



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
 Frame = -3

Query: 480 AYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERML---EAGIEV- 313
           A S  G+L  AR++   +   +   + +MI    +   P  A  LF  M    +A + V 
Sbjct: 38  ALSPSGDLNYARHILRTLHTPNSFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVP 97

Query: 312 --NDATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESARE 139
             +  T   VL+AC+ SG    G+++H +V +  + S+  +  ALI +Y+ SG    A +
Sbjct: 98  RPDHFTYPFVLKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYK 157

Query: 138 VFDGVVEKDVFVWTAMISG 82
           VFD + ++DV  WT++I G
Sbjct: 158 VFDKMPDRDVVSWTSIIDG 176


>ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera] gi|297744424|emb|CBI37686.3| unnamed
           protein product [Vitis vinifera]
          Length = 571

 Score =  191 bits (485), Expect = 5e-47
 Identities = 94/143 (65%), Positives = 114/143 (79%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           IH YS  G+ G A  +F +M +RDVVSWTSMIDG V+ DR +EAI+LFE M+E G+E N+
Sbjct: 138 IHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNE 197

Query: 306 ATVVSVLRACADSGALSMGRKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFDG 127
           ATVVSVLRACAD+GA+ MGR+V  ++ E++I  E NV TALIDMYAK G I SAR+VFDG
Sbjct: 198 ATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDG 257

Query: 126 VVEKDVFVWTAMISGLACHGLCK 58
           +V KDVF WTAMISGLA HGLC+
Sbjct: 258 IVNKDVFAWTAMISGLANHGLCE 280



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
 Frame = -3

Query: 486 IHAYSEFGELGVARNLFDRMPERDVVSWTSMIDGLVNHDRPIEAIKLFERMLEAGIEVND 307
           I  Y++ G +G AR +FD +  +DV +WT+MI GL NH    EA+ LF++M   G+  ++
Sbjct: 239 IDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDE 298

Query: 306 ATVVSVLRACADSGALSMG-RKVHEIVREKRIDSETNVCTALIDMYAKSGCIESAREVFD 130
            T+ +VL AC ++G  S G    + +  +  I         ++D+ A++G ++ A E   
Sbjct: 299 RTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIR 358

Query: 129 GV-VEKDVFVWTAMISGLACHG 67
            + +E DV +W  +I     HG
Sbjct: 359 KMPIEPDVVLWRTLIWASKVHG 380