BLASTX nr result

ID: Glycyrrhiza24_contig00015353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015353
         (1739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   697   0.0  
ref|XP_003533510.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   664   0.0  
ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...   592   e-167
ref|XP_003523890.1| PREDICTED: F-box protein At5g07670-like [Gly...   586   e-165
ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cuc...   586   e-165

>ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g07670-like [Glycine
            max]
          Length = 497

 Score =  697 bits (1798), Expect = 0.0
 Identities = 348/460 (75%), Positives = 384/460 (83%), Gaps = 2/460 (0%)
 Frame = +2

Query: 71   RWSDIWLKHTKSKPLNLNPMVVAMHLHPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250
            RWSDIW   TKSKPLN   MV+AM LH LSS                             
Sbjct: 21   RWSDIW---TKSKPLN--QMVMAMKLHSLSSSPRISTTDKTNPILSPFPITDRTLLLSDA 75

Query: 251  XXXXXXX--PDSQTQRNSNSLVCKRWLNLQGRLVRSLRILDWNFILSGRLIHRFPNLNHV 424
                      DS TQRNSNSLVCKRWLNLQGRLVRSLRI DWNF+LSGRLIHRFPNLNHV
Sbjct: 76   LLLKIIALVSDSSTQRNSNSLVCKRWLNLQGRLVRSLRISDWNFLLSGRLIHRFPNLNHV 135

Query: 425  DLVPGSLISPQSSSLLVSNRVISMHIDSGSSPSWYLVEENMLPVEVIDNGLSALASGCPN 604
            DL+  +LISP++S +L+SNRVISMH+DS SSP+W   E+NMLPVEVIDNGL++LASGCPN
Sbjct: 136  DLLSAALISPKNSGILLSNRVISMHLDSNSSPNWCFFEDNMLPVEVIDNGLTSLASGCPN 195

Query: 605  LRRVNVIGASEMGLLSVAEECPTLQELELQRCSDNVLRGIAACGNLQILRLVGNVDGFYG 784
            LRR++VIG +E+GLL+VAEEC TLQELELQRCSDNVLRGIAACGNLQIL+LVG+VDGFY 
Sbjct: 196  LRRLHVIGTTEIGLLTVAEECSTLQELELQRCSDNVLRGIAACGNLQILKLVGHVDGFYD 255

Query: 785  SVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCMMLEELAICDHRMDDGWIAG 964
            SVVSDIGLTILAQGCKRLVKLEL GCEGSFDGIKAIGKCC MLEEL   DHRMDDGW+A 
Sbjct: 256  SVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMDDGWLAA 315

Query: 965  LSYCENLKTLRLQSCKRIDPNPGMDEYLGFCPALERLHLHKCQLRDKKSVAAMFSVCRAA 1144
            +SYCENLKTLR QSCK+IDPNPGM+EYLG CPALERLHL KCQLRD+KSV A+FSVCRA 
Sbjct: 316  ISYCENLKTLRFQSCKKIDPNPGMEEYLGCCPALERLHLQKCQLRDRKSVVALFSVCRAV 375

Query: 1145 REIIVQDCWGLDNGLFSFATVCRRVKLLYLEGCSLLTTEGLESVIHSWKELQSLRVVSCK 1324
            REI++QDCWGLDN +FS A +C RVKLLYLEGCSLLTTEGLESVIHSWK+LQSLRVVSCK
Sbjct: 376  REIVIQDCWGLDNSMFSLAMICWRVKLLYLEGCSLLTTEGLESVIHSWKDLQSLRVVSCK 435

Query: 1325 NIKDSEISPSLATLFTTLKELKWRPDTKSLLPSSLVGISM 1444
            NIKD+EISP+LATLFTTLKEL+W PDTKSLLPSS+ GI+M
Sbjct: 436  NIKDNEISPALATLFTTLKELRWSPDTKSLLPSSVKGITM 475


>ref|XP_003533510.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g07670-like [Glycine
            max]
          Length = 488

 Score =  664 bits (1714), Expect = 0.0
 Identities = 316/387 (81%), Positives = 354/387 (91%)
 Frame = +2

Query: 275  DSQTQRNSNSLVCKRWLNLQGRLVRSLRILDWNFILSGRLIHRFPNLNHVDLVPGSLISP 454
            DS TQRNSNSLVCKRWLNLQGRLVRSLRI DWNF+LSGRLIHRFPNLNHVDL+  +LISP
Sbjct: 76   DSSTQRNSNSLVCKRWLNLQGRLVRSLRISDWNFLLSGRLIHRFPNLNHVDLLSAALISP 135

Query: 455  QSSSLLVSNRVISMHIDSGSSPSWYLVEENMLPVEVIDNGLSALASGCPNLRRVNVIGAS 634
            + S +L++NRVISMH+ S S P+W   E+NMLP +VIDNGL++LA+GCPNLRR++VIGA+
Sbjct: 136  KYSDVLLTNRVISMHLSSDSFPNWCFCEDNMLPFQVIDNGLTSLAAGCPNLRRLHVIGAT 195

Query: 635  EMGLLSVAEECPTLQELELQRCSDNVLRGIAACGNLQILRLVGNVDGFYGSVVSDIGLTI 814
            E+GLL+VAEEC TLQ LELQRCSDN+LRGIAACGNLQIL+LVG+VDGFY SVVSDIGLTI
Sbjct: 196  EIGLLTVAEECSTLQVLELQRCSDNILRGIAACGNLQILKLVGHVDGFYNSVVSDIGLTI 255

Query: 815  LAQGCKRLVKLELCGCEGSFDGIKAIGKCCMMLEELAICDHRMDDGWIAGLSYCENLKTL 994
            LAQGCKRLVKLEL GCEGSFDGIKAIGKCC MLEEL   DHRM DGW+A +S+CENLKTL
Sbjct: 256  LAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMGDGWLAAISFCENLKTL 315

Query: 995  RLQSCKRIDPNPGMDEYLGFCPALERLHLHKCQLRDKKSVAAMFSVCRAAREIIVQDCWG 1174
            R QSCKRIDPNPGM+EYLG CPAL+RLHL KCQLRDKKSVAA+FSVCR  REI++QDCWG
Sbjct: 316  RFQSCKRIDPNPGMEEYLGCCPALDRLHLQKCQLRDKKSVAALFSVCRVVREIVIQDCWG 375

Query: 1175 LDNGLFSFATVCRRVKLLYLEGCSLLTTEGLESVIHSWKELQSLRVVSCKNIKDSEISPS 1354
            LDN +FSFA +CRRVKLLY+EGCSLLTTEGLE VIHSWKELQSLRVV+CKNIKDSEISP+
Sbjct: 376  LDNSIFSFAMICRRVKLLYVEGCSLLTTEGLECVIHSWKELQSLRVVTCKNIKDSEISPA 435

Query: 1355 LATLFTTLKELKWRPDTKSLLPSSLVG 1435
            LATLFTTLKEL+W PDTKSLLPS ++G
Sbjct: 436  LATLFTTLKELRWSPDTKSLLPSGVMG 462


>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
            gi|222840928|gb|EEE78475.1| f-box family protein [Populus
            trichocarpa]
          Length = 551

 Score =  592 bits (1527), Expect = e-167
 Identities = 295/423 (69%), Positives = 336/423 (79%), Gaps = 32/423 (7%)
 Frame = +2

Query: 272  PDSQTQRNSNSLVCKRWLNLQGRLVRSLRILDWNFILSGRLIHRFPNLNHVDLVPGSLIS 451
            PDSQ  RN NSLVCKRWLNLQGRLVRSL++LDW F+ SGRL+ RFPNL HVDL+ G ++ 
Sbjct: 105  PDSQ--RNPNSLVCKRWLNLQGRLVRSLKVLDWEFLESGRLLSRFPNLTHVDLLNGCVVR 162

Query: 452  PQSSSLLVSNRVISMHIDSGSS---PSWYLVEENMLPVEVIDNGLSALASGCPNLRRVNV 622
            P    +L+S+R+  M I+SG S   P W + EEN+LPVEV+D GL  LASGCPNLR++ V
Sbjct: 163  PHDCCVLLSHRIFKMDINSGVSGFLPDWRVCEENLLPVEVVDRGLRGLASGCPNLRKLVV 222

Query: 623  IGASEMGLLSVAEECPTLQELELQRCSDNVLRGIAACGNLQILRLVGNVDGFYGSVVSDI 802
             GASEMGLLSVAEEC TLQELEL RC+DN+LRGIAACGNLQIL+LVGNVDGFYGS+VSDI
Sbjct: 223  AGASEMGLLSVAEECLTLQELELHRCNDNLLRGIAACGNLQILKLVGNVDGFYGSLVSDI 282

Query: 803  GLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCMMLEELAICDHRMDDGWIAGLSYCEN 982
            GLTILAQG KRLVK+EL GCEGSFDG+KAIG+CC MLEEL ICDHRMD+GW+AGLSYCEN
Sbjct: 283  GLTILAQGSKRLVKIELNGCEGSFDGMKAIGQCCQMLEELTICDHRMDNGWLAGLSYCEN 342

Query: 983  LKTLRLQSCKRIDPNPGMDEYLGFCPALERLHLHKCQLRDKKSVAAMFSVCRAAREIIVQ 1162
            LKTLR  SCKRIDP+PG D+YLG CPALERLHL KCQLRDKKS+ AMF +C   REI+VQ
Sbjct: 343  LKTLRFLSCKRIDPSPGPDDYLGCCPALERLHLQKCQLRDKKSLKAMFKLCETVREIVVQ 402

Query: 1163 DCWGLDNGLFSFATVC-----------------------------RRVKLLYLEGCSLLT 1255
            DCWGLDN LFS A  C                             RRVKLL LEGCSLLT
Sbjct: 403  DCWGLDNDLFSLARTCSALDHVVEIDSESFAFNCLAGMCHTHTLNRRVKLLSLEGCSLLT 462

Query: 1256 TEGLESVIHSWKELQSLRVVSCKNIKDSEISPSLATLFTTLKELKWRPDTKSLLPSSLVG 1435
            TEGLESV+ +W EL+ LR+ SCKNIKDSE+SP+L+TLF+ LKEL+WRPDT+SLL SSLVG
Sbjct: 463  TEGLESVLLTWNELEHLRIESCKNIKDSEVSPTLSTLFSVLKELRWRPDTRSLLASSLVG 522

Query: 1436 ISM 1444
              M
Sbjct: 523  TGM 525


>ref|XP_003523890.1| PREDICTED: F-box protein At5g07670-like [Glycine max]
          Length = 522

 Score =  586 bits (1511), Expect = e-165
 Identities = 298/454 (65%), Positives = 348/454 (76%), Gaps = 1/454 (0%)
 Frame = +2

Query: 86   WLKHTKSKPLNLNPMVVAMHLHPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 265
            WL  T +    LNPMV+AMHL    S                                  
Sbjct: 70   WLNTTATTE-PLNPMVLAMHLSDPKSKTLIPNSTLIIMDRTLLLSDELLLRILSKL---- 124

Query: 266  XXPDSQTQRNSNSLVCKRWLNLQGRLVRSLRILDWNFILSGRLIHRFPNLNHVDLVPGSL 445
              P+SQ QRNSNSLVCKRWLNLQGRLVR+LR+LDWNF+LSGRLI RFPNLNHVDLVPGS 
Sbjct: 125  --PNSQQQRNSNSLVCKRWLNLQGRLVRTLRVLDWNFVLSGRLIIRFPNLNHVDLVPGSF 182

Query: 446  ISPQSSSLLVSNRVISMHIDSGSSPSWYL-VEENMLPVEVIDNGLSALASGCPNLRRVNV 622
             S   SS++VS+R++SMH+DS    +W + VE+N+LPVE +D GL +LA GCPNLR++ V
Sbjct: 183  TSSVYSSIVVSHRLVSMHVDS----AWRIGVEKNLLPVETVDAGLKSLAGGCPNLRKLEV 238

Query: 623  IGASEMGLLSVAEECPTLQELELQRCSDNVLRGIAACGNLQILRLVGNVDGFYGSVVSDI 802
             G SE G+ ++  EC TLQELELQRC D VL G+A C NLQIL++VG V GFY SVVSDI
Sbjct: 239  AGCSEAGISTIGAECVTLQELELQRCDDAVLGGVAGCENLQILKIVGCVRGFYESVVSDI 298

Query: 803  GLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCMMLEELAICDHRMDDGWIAGLSYCEN 982
            GLTILAQGC+RLVKLEL GCEGSFDG+KAIG+CC+MLEEL I DHRMDDGW+AG+S+CEN
Sbjct: 299  GLTILAQGCRRLVKLELVGCEGSFDGVKAIGQCCVMLEELVIVDHRMDDGWLAGVSFCEN 358

Query: 983  LKTLRLQSCKRIDPNPGMDEYLGFCPALERLHLHKCQLRDKKSVAAMFSVCRAAREIIVQ 1162
            LKTLR+QSCK ID +PG++E+LG C ALER+HL K Q+RD+  V A+FSVCR AREI++Q
Sbjct: 359  LKTLRVQSCKVIDGSPGLEEHLGCCEALERVHLQKFQMRDRNGVGALFSVCRNAREIVLQ 418

Query: 1163 DCWGLDNGLFSFATVCRRVKLLYLEGCSLLTTEGLESVIHSWKELQSLRVVSCKNIKDSE 1342
            DCWGLD+G  S A VCRRVKL Y+EGCSLLTTEGLESVI  WKEL+ LRVVSCKNIKDS+
Sbjct: 419  DCWGLDDGTLSLAVVCRRVKLFYVEGCSLLTTEGLESVIEHWKELECLRVVSCKNIKDSD 478

Query: 1343 ISPSLATLFTTLKELKWRPDTKSLLPSSLVGISM 1444
            ISP LATLF+TLKELKWRPDTK L PS  VG+SM
Sbjct: 479  ISPELATLFSTLKELKWRPDTKYLFPSD-VGVSM 511


>ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cucumis sativus]
            gi|449524196|ref|XP_004169109.1| PREDICTED: F-box protein
            At5g07670-like [Cucumis sativus]
          Length = 526

 Score =  586 bits (1510), Expect = e-165
 Identities = 302/464 (65%), Positives = 347/464 (74%), Gaps = 3/464 (0%)
 Frame = +2

Query: 62   RVHRWSDIWLKHTKSKPLNLNPMVVAMHLHPLSSPXXXXXXXXXXXXXXXXXXXXXXXXX 241
            R  RWSD+WLK+T S    L  +++AM L   S                           
Sbjct: 40   RTPRWSDVWLKNTNS----LENVILAMKLQSFSKDSHIPTPNSKTKPLLANFCKIDRTLL 95

Query: 242  XXXXXXXXXX---PDSQTQRNSNSLVCKRWLNLQGRLVRSLRILDWNFILSGRLIHRFPN 412
                         PDSQ  RNSN LVCKRWLNLQGRLVRSLR++D NF+LSGRLI RFPN
Sbjct: 96   LSDELLLRILSKLPDSQ--RNSNFLVCKRWLNLQGRLVRSLRVMDLNFLLSGRLILRFPN 153

Query: 413  LNHVDLVPGSLISPQSSSLLVSNRVISMHIDSGSSPSWYLVEENMLPVEVIDNGLSALAS 592
            LN VDLV GSL+S ++S +L+SNR++SMH+DS   P   + EEN+L   VID GL  LAS
Sbjct: 154  LNRVDLVSGSLMSSRNSGILLSNRILSMHVDSWFLPVPGVGEENILDDMVIDKGLKTLAS 213

Query: 593  GCPNLRRVNVIGASEMGLLSVAEECPTLQELELQRCSDNVLRGIAACGNLQILRLVGNVD 772
            GCPNLR++  IG SEMGLLSVAEEC TLQELEL +C+DN+LRGIAAC NLQIL+L+GNVD
Sbjct: 214  GCPNLRKLAFIGGSEMGLLSVAEECETLQELELHKCNDNLLRGIAACENLQILKLIGNVD 273

Query: 773  GFYGSVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCMMLEELAICDHRMDDG 952
            G Y SVV+DIGLTILAQGCKRLVKLEL GCEGSFDGIKAIG+CC MLEEL ICDHRMDDG
Sbjct: 274  GLYSSVVTDIGLTILAQGCKRLVKLELNGCEGSFDGIKAIGQCCQMLEELTICDHRMDDG 333

Query: 953  WIAGLSYCENLKTLRLQSCKRIDPNPGMDEYLGFCPALERLHLHKCQLRDKKSVAAMFSV 1132
            W+A LSYCENLKTLR+ SC++IDPNPG DEYL  CPALERLHLH CQLR+++S  A+F  
Sbjct: 334  WLAALSYCENLKTLRIMSCRKIDPNPGPDEYLSPCPALERLHLHNCQLRERRSAKALFVT 393

Query: 1133 CRAAREIIVQDCWGLDNGLFSFATVCRRVKLLYLEGCSLLTTEGLESVIHSWKELQSLRV 1312
            C AAREI   DCWGL +G+FSFA+   RVK L LEGCSLLTT+GLESVI  W ELQSLRV
Sbjct: 394  CGAAREIFFSDCWGLVDGIFSFASHFWRVKFLSLEGCSLLTTQGLESVILQWNELQSLRV 453

Query: 1313 VSCKNIKDSEISPSLATLFTTLKELKWRPDTKSLLPSSLVGISM 1444
             SCKNIK+S ISP+L++LF+  K+LKWRPDTKSLL SSL G  M
Sbjct: 454  ESCKNIKESSISPALSSLFSIFKDLKWRPDTKSLLSSSLTGTHM 497


Top