BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015344
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551474.1| PREDICTED: uncharacterized protein LOC100797...   516   e-144
ref|XP_003537538.1| PREDICTED: nuclear pore complex protein Nup5...   493   e-137
gb|AFK45985.1| unknown [Medicago truncatula]                          488   e-137
ref|XP_003601806.1| Nuclear pore complex protein Nup54 [Medicago...   491   e-136
gb|ACJ85361.1| unknown [Medicago truncatula]                          488   e-135

>ref|XP_003551474.1| PREDICTED: uncharacterized protein LOC100797030 [Glycine max]
          Length = 391

 Score =  516 bits (1330), Expect = e-144
 Identities = 266/285 (93%), Positives = 272/285 (95%)
 Frame = +1

Query: 325  LAAPQQQTPFPNSQLTTQMATVAPVPFSLADRDVQAIVDAYKEDPGNPKYAFKHLLFSVT 504
            LAAPQ    FPN+QLTTQMA VAPVPFSLADRDVQ IVDAYKEDPGNPKYAFKHLLFSVT
Sbjct: 108  LAAPQPSL-FPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVT 166

Query: 505  EPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIVSDA 684
            EPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQ+VQGFKDLSQRLKIQDEVIVSDA
Sbjct: 167  EPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIVSDA 226

Query: 685  ERLRITQSNVKMLQRHFQADTLPWIQRMKQKEQILQQRLLRVMRIVEALEGKGCRIPLTK 864
            ERLRITQSNVKMLQRHFQADTLPWI+R+KQKEQILQQRLLRVMRIVEALE KGCRIPLTK
Sbjct: 227  ERLRITQSNVKMLQRHFQADTLPWIKRLKQKEQILQQRLLRVMRIVEALEEKGCRIPLTK 286

Query: 865  GEAELAEKLATVTRQLKGSGAELSRRVQNLLTVSRVKANGNGFGGSIYLPGSTKIHEQSL 1044
            GEAELAEKLAT+TRQLKGSGAELSRRVQNLLTVSRVKAN NGFG S+YLPGSTKIHEQSL
Sbjct: 287  GEAELAEKLATITRQLKGSGAELSRRVQNLLTVSRVKANSNGFGSSVYLPGSTKIHEQSL 346

Query: 1045 TDLQEVLQQQMEAIARLGSVLKRDIRDMEIMMAEDTGTTENGNLI 1179
             DLQEVLQQQMEAIARLGSVLKRDIRDMEIMM EDT  TENGNLI
Sbjct: 347  GDLQEVLQQQMEAIARLGSVLKRDIRDMEIMMTEDTARTENGNLI 391


>ref|XP_003537538.1| PREDICTED: nuclear pore complex protein Nup54-like [Glycine max]
          Length = 349

 Score =  493 bits (1269), Expect = e-137
 Identities = 251/275 (91%), Positives = 263/275 (95%)
 Frame = +1

Query: 328  AAPQQQTPFPNSQLTTQMATVAPVPFSLADRDVQAIVDAYKEDPGNPKYAFKHLLFSVTE 507
            AAPQ  +PFPN+QLTTQMA VAPVPFSLADRDVQ IVDAYK+DPGNPKYAFKHLLFSVTE
Sbjct: 74   AAPQS-SPFPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKDDPGNPKYAFKHLLFSVTE 132

Query: 508  PQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIVSDAE 687
            PQFRVKPAGVSDIMWAEA+GKL+GMES DRERLWPQ+VQGFKDLSQRLKIQDEVIVSDAE
Sbjct: 133  PQFRVKPAGVSDIMWAEAIGKLQGMESPDRERLWPQLVQGFKDLSQRLKIQDEVIVSDAE 192

Query: 688  RLRITQSNVKMLQRHFQADTLPWIQRMKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKG 867
            RLRITQSNVKMLQRHFQADTLPWIQR+KQKEQILQQ LLRVMRIVEALE KGCRIPLTKG
Sbjct: 193  RLRITQSNVKMLQRHFQADTLPWIQRLKQKEQILQQHLLRVMRIVEALEEKGCRIPLTKG 252

Query: 868  EAELAEKLATVTRQLKGSGAELSRRVQNLLTVSRVKANGNGFGGSIYLPGSTKIHEQSLT 1047
            EAELAEKLAT+TR+LKGSGAELSRRVQNLL VSRVKAN NGFG S+YLPGSTKIHEQSL 
Sbjct: 253  EAELAEKLATITRKLKGSGAELSRRVQNLLIVSRVKANSNGFGSSVYLPGSTKIHEQSLG 312

Query: 1048 DLQEVLQQQMEAIARLGSVLKRDIRDMEIMMAEDT 1152
            DLQEVLQQQ+EAIARLG+VLKRDIRDMEIMM EDT
Sbjct: 313  DLQEVLQQQLEAIARLGNVLKRDIRDMEIMMTEDT 347


>gb|AFK45985.1| unknown [Medicago truncatula]
          Length = 396

 Score =  488 bits (1257), Expect(2) = e-137
 Identities = 251/284 (88%), Positives = 265/284 (93%), Gaps = 4/284 (1%)
 Frame = +1

Query: 340  QQTPFPNSQLTTQMATVAPVPFSLADRDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFR 519
            Q +PFPNSQLTTQMA VAPVPFSLADRD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFR
Sbjct: 101  QPSPFPNSQLTTQMANVAPVPFSLADRDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFR 160

Query: 520  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRI 699
            VKPAGVSDIMWAEAMGKLEGMESADRERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +
Sbjct: 161  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSV 220

Query: 700  TQSNVKMLQRHFQADTLPWIQRMKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAEL 879
            TQSNVKMLQRHFQADTLPWIQR+KQKEQILQQR+LRVMRIVEALEGKGCRIPLTKGEAEL
Sbjct: 221  TQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAEL 280

Query: 880  AEKLATVTRQLKGSGAELSRRVQNLLTVSRVKANGNGFGGSIYLPGSTKIHEQSLTDLQE 1059
            AEKLAT+TRQLKGSGAELSRRVQNLL VSRVKAN NGF  S +L GSTKIH+QSL DLQE
Sbjct: 281  AEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNGFCNSAHLLGSTKIHDQSLADLQE 340

Query: 1060 VLQQQMEAIARLGSVLKRDIRDMEIMMAEDTGT----TENGNLI 1179
            VLQQQM+AIARLGSVLKRD RDMEIMMAEDTGT    T N NL+
Sbjct: 341  VLQQQMDAIARLGSVLKRDARDMEIMMAEDTGTFRKWTFNVNLL 384



 Score = 26.6 bits (57), Expect(2) = e-137
 Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +3

Query: 1164 KWEFNLNLVKK-IVFLCH 1214
            KW FN+NL+KK + FL H
Sbjct: 376  KWTFNVNLLKKSVAFLLH 393


>ref|XP_003601806.1| Nuclear pore complex protein Nup54 [Medicago truncatula]
            gi|355490854|gb|AES72057.1| Nuclear pore complex protein
            Nup54 [Medicago truncatula]
          Length = 385

 Score =  491 bits (1263), Expect = e-136
 Identities = 251/285 (88%), Positives = 267/285 (93%), Gaps = 5/285 (1%)
 Frame = +1

Query: 340  QQTPFPNSQLTTQMATVAPVPFSLADRDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFR 519
            Q +PFPNSQLTTQMA VAPVPFSLADRD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFR
Sbjct: 101  QPSPFPNSQLTTQMANVAPVPFSLADRDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFR 160

Query: 520  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRI 699
            VKPAGVSDIMWAEAMGKLEGMESADRERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +
Sbjct: 161  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSV 220

Query: 700  TQSNVKMLQRHFQADTLPWIQRMKQKEQILQQRLLR-----VMRIVEALEGKGCRIPLTK 864
            TQSNVKMLQRHFQADTLPWIQR+KQKEQILQQR+LR     VMRIVEALEGKGCRIPLTK
Sbjct: 221  TQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVWTIVVMRIVEALEGKGCRIPLTK 280

Query: 865  GEAELAEKLATVTRQLKGSGAELSRRVQNLLTVSRVKANGNGFGGSIYLPGSTKIHEQSL 1044
            GEAELAEKLAT+TRQLKGSGAELSRRVQNLL VSRVKAN NGF  S +L GSTKIH+QSL
Sbjct: 281  GEAELAEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNGFCNSAHLLGSTKIHDQSL 340

Query: 1045 TDLQEVLQQQMEAIARLGSVLKRDIRDMEIMMAEDTGTTENGNLI 1179
             DLQEVLQQQM+AIARLGSVLKRD RDMEIMMAEDTGT+ENG+L+
Sbjct: 341  ADLQEVLQQQMDAIARLGSVLKRDARDMEIMMAEDTGTSENGHLM 385


>gb|ACJ85361.1| unknown [Medicago truncatula]
          Length = 384

 Score =  488 bits (1255), Expect = e-135
 Identities = 247/273 (90%), Positives = 260/273 (95%)
 Frame = +1

Query: 340  QQTPFPNSQLTTQMATVAPVPFSLADRDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFR 519
            Q +PFPNSQLTTQMA VAPVPFSLADRD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFR
Sbjct: 101  QPSPFPNSQLTTQMANVAPVPFSLADRDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFR 160

Query: 520  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRI 699
            VKPAGVSDIMWAEAMGKLEGMESADRERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +
Sbjct: 161  VKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSV 220

Query: 700  TQSNVKMLQRHFQADTLPWIQRMKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAEL 879
            TQSNVKMLQRHFQADTLPWIQR+KQKEQILQQR+LRVMRIVEALEGKGCRIPLTKGEAEL
Sbjct: 221  TQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAEL 280

Query: 880  AEKLATVTRQLKGSGAELSRRVQNLLTVSRVKANGNGFGGSIYLPGSTKIHEQSLTDLQE 1059
            AEKLAT+TRQLKGSGAELSRRVQNLL VSRVKAN NGF  S +L GSTKIH+QSL DLQE
Sbjct: 281  AEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNGFCNSAHLLGSTKIHDQSLADLQE 340

Query: 1060 VLQQQMEAIARLGSVLKRDIRDMEIMMAEDTGT 1158
            VLQQQM+AIARLGSVLKRD RDMEIMMAEDTGT
Sbjct: 341  VLQQQMDAIARLGSVLKRDARDMEIMMAEDTGT 373