BLASTX nr result

ID: Glycyrrhiza24_contig00015342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015342
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago ...   317   7e-85
ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   301   3e-80
ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   289   2e-76
emb|CBI19277.3| unnamed protein product [Vitis vinifera]              235   3e-60
ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   235   3e-60

>ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]
           gi|355516645|gb|AES98268.1| Protein VERNALIZATION
           INSENSITIVE [Medicago truncatula]
          Length = 588

 Score =  317 bits (812), Expect = 7e-85
 Identities = 155/178 (87%), Positives = 166/178 (93%), Gaps = 1/178 (0%)
 Frame = -1

Query: 535 QMSGILKGSCGRTLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDMLSLRISLAHRIL 356
           QM+ ILKG C  TLDGSFYCVSCGKIN+LMRTWRKQLLVAKEARRVD+LSLRISLAHR+L
Sbjct: 198 QMACILKGGCSTTLDGSFYCVSCGKINDLMRTWRKQLLVAKEARRVDILSLRISLAHRML 257

Query: 355 VGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFD 176
           +GT+VYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAV+CFD
Sbjct: 258 IGTKVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVQCFD 317

Query: 175 SKFSDLFSNCTEKKEVPT-CYIRFEECLPTSVVIVLEYNDNLLKNFLGCRLWHGISAM 5
            KFS++FS+C EKKE PT C + FEECLPTSVVIVLEYND LLKNFLGCRLWHGIS M
Sbjct: 318 LKFSEIFSSCAEKKEAPTACSLHFEECLPTSVVIVLEYNDKLLKNFLGCRLWHGISTM 375


>ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 633

 Score =  301 bits (772), Expect = 3e-80
 Identities = 150/177 (84%), Positives = 158/177 (89%)
 Frame = -1

Query: 535 QMSGILKGSCGRTLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDMLSLRISLAHRIL 356
           QMS ILKGSCG  LDG+F CVSCGKINELM+TW KQLLVAKEARR D+LSLRISLAHRIL
Sbjct: 213 QMSSILKGSCGIKLDGAFCCVSCGKINELMKTWWKQLLVAKEARRTDILSLRISLAHRIL 272

Query: 355 VGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFD 176
           VGTEVYKEVQKIVETALKLLENEVG LDHVYA MTRGIVSRLSCGAEVQ+LCS+A+ECFD
Sbjct: 273 VGTEVYKEVQKIVETALKLLENEVGSLDHVYASMTRGIVSRLSCGAEVQRLCSSALECFD 332

Query: 175 SKFSDLFSNCTEKKEVPTCYIRFEECLPTSVVIVLEYNDNLLKNFLGCRLWHGISAM 5
           SKFS LFS C E K+ PTC I FEECLPTSVVIVLEY D LLKNFLGCRLWH IS +
Sbjct: 333 SKFSGLFSICVENKDAPTCSIHFEECLPTSVVIVLEYKDKLLKNFLGCRLWHRISTI 389


>ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 630

 Score =  289 bits (740), Expect = 2e-76
 Identities = 147/178 (82%), Positives = 158/178 (88%), Gaps = 1/178 (0%)
 Frame = -1

Query: 535 QMSGILKGSCGRT-LDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDMLSLRISLAHRI 359
           QMSGILKGSCG   LDG+F CVSCGKINELM+TWRKQLLVAKEARR D+LSLR+SLAHRI
Sbjct: 212 QMSGILKGSCGGVKLDGTFCCVSCGKINELMKTWRKQLLVAKEARRTDILSLRLSLAHRI 271

Query: 358 LVGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECF 179
           L+GTEVYKEVQKIVETALKLLENEVG L   YA MTRGIVSRLSCGAEVQ+LC+TA+ECF
Sbjct: 272 LLGTEVYKEVQKIVETALKLLENEVGSL---YASMTRGIVSRLSCGAEVQRLCTTALECF 328

Query: 178 DSKFSDLFSNCTEKKEVPTCYIRFEECLPTSVVIVLEYNDNLLKNFLGCRLWHGISAM 5
           DSKFS LFS C E K+ PTC IRFEECLPTSVVIVLEY D LL+NFLGCRLWH +S M
Sbjct: 329 DSKFSVLFSICLENKDAPTCSIRFEECLPTSVVIVLEYKDKLLQNFLGCRLWHRLSTM 386


>emb|CBI19277.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  235 bits (600), Expect = 3e-60
 Identities = 116/177 (65%), Positives = 138/177 (77%)
 Frame = -1

Query: 535 QMSGILKGSCGRTLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDMLSLRISLAHRIL 356
           + +GI K  C   LDG FYC SCGKIN L+RTWRKQL+VAKEARRVD+L LR+ L+H+IL
Sbjct: 12  ERTGITKNGCRPKLDGEFYCASCGKINGLLRTWRKQLMVAKEARRVDVLCLRVFLSHKIL 71

Query: 355 VGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFD 176
            GTE YK++QK +ETA+K L+NEVGPLD V  +M RGIV+RLSCGAEVQKLC++AVE FD
Sbjct: 72  KGTEQYKDLQKTMETAVKRLKNEVGPLDRVCTKMARGIVNRLSCGAEVQKLCTSAVEAFD 131

Query: 175 SKFSDLFSNCTEKKEVPTCYIRFEECLPTSVVIVLEYNDNLLKNFLGCRLWHGISAM 5
           S F D +   T++KE     IRFEEC PTSVVIVL Y D+LL+ FLGCRLWH  S M
Sbjct: 132 SMFPDPYPADTDQKEQAGMQIRFEECSPTSVVIVLGYEDHLLEEFLGCRLWHRKSTM 188


>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score =  235 bits (600), Expect = 3e-60
 Identities = 116/177 (65%), Positives = 138/177 (77%)
 Frame = -1

Query: 535 QMSGILKGSCGRTLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDMLSLRISLAHRIL 356
           + +GI K  C   LDG FYC SCGKIN L+RTWRKQL+VAKEARRVD+L LR+ L+H+IL
Sbjct: 197 ERTGITKNGCRPKLDGEFYCASCGKINGLLRTWRKQLMVAKEARRVDVLCLRVFLSHKIL 256

Query: 355 VGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFD 176
            GTE YK++QK +ETA+K L+NEVGPLD V  +M RGIV+RLSCGAEVQKLC++AVE FD
Sbjct: 257 KGTEQYKDLQKTMETAVKRLKNEVGPLDRVCTKMARGIVNRLSCGAEVQKLCTSAVEAFD 316

Query: 175 SKFSDLFSNCTEKKEVPTCYIRFEECLPTSVVIVLEYNDNLLKNFLGCRLWHGISAM 5
           S F D +   T++KE     IRFEEC PTSVVIVL Y D+LL+ FLGCRLWH  S M
Sbjct: 317 SMFPDPYPADTDQKEQAGMQIRFEECSPTSVVIVLGYEDHLLEEFLGCRLWHRKSTM 373


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