BLASTX nr result

ID: Glycyrrhiza24_contig00015336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015336
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_003594127.1| Pentatricopeptide repeat-containing protein ...    84   2e-14
emb|CBI26175.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
            mitochondrial-like [Glycine max]
          Length = 912

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = -3

Query: 318  KNLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRVMQGQRMERVPGCSGVVR 160
            ++LAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRR +Q QRMER+PGCSGV+R
Sbjct: 860  ESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGVIR 912


>ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365519|gb|ABN09753.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483175|gb|AES64378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = -3

Query: 318 KNLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRVMQGQRMERVPGCSGVV 163
           +NLA LAPSHGGGKVLLSNIYA+AG+WE+VS VR VMQGQ M+R PG SG V
Sbjct: 644 ENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYSGFV 695


>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 318 KNLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRVMQGQRMERVPGCSGVV 163
           +NLA L  SHG G+VLLSNIYADAGRW+D  LVRR MQ QRM++ PGCSGVV
Sbjct: 568 ENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGVV 619


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 318 KNLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRVMQGQRMERVPGCSGVV 163
           +NLA L  SHG G+VLLSNIYADAGRW+D  LVRR MQ QRM++ PGCSGVV
Sbjct: 643 ENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGVV 694


>ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|222863460|gb|EEF00591.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/52 (69%), Positives = 41/52 (78%)
 Frame = -3

Query: 318 KNLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRVMQGQRMERVPGCSGVV 163
           +NLA L PSHG  ++LLSN+YAD GRWED  LVRRVMQ  RM R+PG SGVV
Sbjct: 520 ENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQSHRMHRLPGYSGVV 571


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