BLASTX nr result

ID: Glycyrrhiza24_contig00015274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015274
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524727.1| PREDICTED: pre-rRNA-processing protein ESF2-...   296   2e-78
ref|NP_001241170.1| uncharacterized protein LOC100782763 [Glycin...   292   3e-77
gb|ACU21408.1| unknown [Glycine max]                                  291   5e-77
ref|XP_003618772.1| Pre-rRNA-processing protein esf2 [Medicago t...   276   2e-72
emb|CBI15766.3| unnamed protein product [Vitis vinifera]              247   1e-63

>ref|XP_003524727.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Glycine max]
          Length = 251

 Score =  296 bits (758), Expect = 2e-78
 Identities = 150/178 (84%), Positives = 157/178 (88%)
 Frame = +2

Query: 80  GVCYLSRIPPHMDHVKLRQILSQFGDIQRIFLAPQGGSAAQVPSKRSRGSRDQAYSEGWV 259
           GVCY+SRIPPHMDHVKLR ILSQFGDIQRIFLAPQ  S+ QVP+KRSRGSRDQAYSEGWV
Sbjct: 48  GVCYMSRIPPHMDHVKLRHILSQFGDIQRIFLAPQD-SSVQVPAKRSRGSRDQAYSEGWV 106

Query: 260 EFANKSVAKSVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKATREQK 439
           EF NKSVAK VANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKA REQK
Sbjct: 107 EFGNKSVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKAIREQK 166

Query: 440 LALELSAAKKERDFYLSRVDQSRALDAIEERLXXXXXXXXXXXXMAKVIRHFPQTKPI 613
           LA+ELSAAK+ERDFYLS+VDQSRAL AIEERL            + KVIRHFPQTKPI
Sbjct: 167 LAVELSAAKRERDFYLSKVDQSRALSAIEERLKKKQKIQKDSGPVEKVIRHFPQTKPI 224


>ref|NP_001241170.1| uncharacterized protein LOC100782763 [Glycine max]
           gi|255647374|gb|ACU24153.1| unknown [Glycine max]
          Length = 247

 Score =  292 bits (748), Expect = 3e-77
 Identities = 149/179 (83%), Positives = 156/179 (87%)
 Frame = +2

Query: 77  RGVCYLSRIPPHMDHVKLRQILSQFGDIQRIFLAPQGGSAAQVPSKRSRGSRDQAYSEGW 256
           RGVCY+SRIPPHMDHVKLR ILSQFGDIQRIFLAPQ  S+ QV +KRSRGSRDQAYSEGW
Sbjct: 47  RGVCYMSRIPPHMDHVKLRHILSQFGDIQRIFLAPQD-SSVQVSAKRSRGSRDQAYSEGW 105

Query: 257 VEFANKSVAKSVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKATREQ 436
           VEF NKSVAK VANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKA REQ
Sbjct: 106 VEFGNKSVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKAIREQ 165

Query: 437 KLALELSAAKKERDFYLSRVDQSRALDAIEERLXXXXXXXXXXXXMAKVIRHFPQTKPI 613
           KLA+ELSAAK+ERDFYLS+VDQSRAL AIE RL            + KVIRHFPQTKPI
Sbjct: 166 KLAVELSAAKRERDFYLSKVDQSRALSAIEGRLKKKQKIQQDSGLVEKVIRHFPQTKPI 224


>gb|ACU21408.1| unknown [Glycine max]
          Length = 251

 Score =  291 bits (746), Expect = 5e-77
 Identities = 148/178 (83%), Positives = 156/178 (87%)
 Frame = +2

Query: 80  GVCYLSRIPPHMDHVKLRQILSQFGDIQRIFLAPQGGSAAQVPSKRSRGSRDQAYSEGWV 259
           GVCY+SRIPPHMDHVKLR ILSQFGDIQRIFLAPQ  S+ QVP+KRSRGSRDQAYSEGWV
Sbjct: 48  GVCYMSRIPPHMDHVKLRHILSQFGDIQRIFLAPQD-SSVQVPAKRSRGSRDQAYSEGWV 106

Query: 260 EFANKSVAKSVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKATREQK 439
           EF NKSVAK VANMLNGEQI GKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKA RE+K
Sbjct: 107 EFGNKSVAKRVANMLNGEQIRGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKAIRERK 166

Query: 440 LALELSAAKKERDFYLSRVDQSRALDAIEERLXXXXXXXXXXXXMAKVIRHFPQTKPI 613
           LA+ELSAAK+ERDFYLS+VDQSRAL AIEERL            + KVIRHFPQTKPI
Sbjct: 167 LAVELSAAKRERDFYLSKVDQSRALSAIEERLKKKQKIQKDSGPVEKVIRHFPQTKPI 224


>ref|XP_003618772.1| Pre-rRNA-processing protein esf2 [Medicago truncatula]
           gi|355493787|gb|AES74990.1| Pre-rRNA-processing protein
           esf2 [Medicago truncatula]
          Length = 314

 Score =  276 bits (707), Expect = 2e-72
 Identities = 141/179 (78%), Positives = 156/179 (87%)
 Frame = +2

Query: 77  RGVCYLSRIPPHMDHVKLRQILSQFGDIQRIFLAPQGGSAAQVPSKRSRGSRDQAYSEGW 256
           RGVCYLSRIPPHMDHVKLRQ+LSQFGDIQRI+LAPQ  S A+V SKR+R S++QAYSEGW
Sbjct: 60  RGVCYLSRIPPHMDHVKLRQLLSQFGDIQRIYLAPQD-SNARVQSKRARASQNQAYSEGW 118

Query: 257 VEFANKSVAKSVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKATREQ 436
           VEFANK VAK VAN +NGEQIGGKKRSSF+YDLWNIKYLSKFKWDDLTEELA K+ATREQ
Sbjct: 119 VEFANKCVAKRVANNINGEQIGGKKRSSFHYDLWNIKYLSKFKWDDLTEELAFKRATREQ 178

Query: 437 KLALELSAAKKERDFYLSRVDQSRALDAIEERLXXXXXXXXXXXXMAKVIRHFPQTKPI 613
           KLALELSAAKKERDFY+S+VDQSR L+AI+ERL            + +VIRHFPQTKPI
Sbjct: 179 KLALELSAAKKERDFYMSKVDQSRTLNAIDERL----KKKQKVQHVERVIRHFPQTKPI 233


>emb|CBI15766.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  247 bits (630), Expect = 1e-63
 Identities = 129/188 (68%), Positives = 143/188 (76%), Gaps = 9/188 (4%)
 Frame = +2

Query: 77  RGVCYLSRIPPHMDHVKLRQILSQFGDIQRIFLAPQGGSAAQVPSKRSRGSRDQAYSEGW 256
           RGVCYLSRIPPHMDHVKLR ILSQ+G+IQRI+LAP+   A QV  KR+ G R Q +SEGW
Sbjct: 134 RGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAPED-PATQVHRKRAGGFRGQVFSEGW 192

Query: 257 VEFANKSVAKSVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTEELALKKATREQ 436
           VEF  K+VAK VA MLNGEQIGG+KRSSFYYDLWNIKYLSKFKWDDLTEE+A K A REQ
Sbjct: 193 VEFTKKTVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQ 252

Query: 437 KLALELSAAKKERDFYLSRVDQSRALDAIEERLXXXXXXXXXXXXMA---------KVIR 589
           KLALELSAAK+ERDFYLS+VD+SRAL +IEERL                       KVIR
Sbjct: 253 KLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIR 312

Query: 590 HFPQTKPI 613
            FPQ  P+
Sbjct: 313 QFPQKPPL 320


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