BLASTX nr result

ID: Glycyrrhiza24_contig00015273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015273
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...   640   0.0  
ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]   566   e-159
ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]   563   e-158
ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula] g...   540   e-151
ref|XP_002329673.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96

>ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6, chloroplastic-like
            [Glycine max]
          Length = 952

 Score =  640 bits (1652), Expect = 0.0
 Identities = 323/438 (73%), Positives = 358/438 (81%), Gaps = 5/438 (1%)
 Frame = -2

Query: 1300 VVDELTDIDAGSSSSHDPPVTTLDSAKPTVGSDDIRLSSNVDPSNPVTRSSSLESTGSMG 1121
            VVDEL D+D GSSSS  PPVTT+D+ KPT+G+DD+RLSS VD   PVT SSSL STGSMG
Sbjct: 203  VVDELIDVDTGSSSSLGPPVTTVDAVKPTIGADDVRLSSTVDSRAPVTSSSSLNSTGSMG 262

Query: 1120 CSDLDVTVIESQLRALSVSNLPNLESQSNKHKWKSSFXXXXXXXXXXXNPCEVLSTNFQS 941
             + LDVT++ESQLRAL+VSNLPN ESQS + KWK+S             PC V +TN QS
Sbjct: 263  FNVLDVTIVESQLRALNVSNLPNSESQSYEDKWKNSCQNNLMQHQQQNYPCVVPNTNSQS 322

Query: 940  EKCTYVGMEQFVHNPSKFSSDVQPLLQSSGFTPPLHAT-AAAYMTSTNPFCTNLQASGIY 764
            EKCTYVGMEQF+HNPSKFSSDVQP+LQSSG+TPPL+AT AAAYMTS NPF TNLQASGIY
Sbjct: 323  EKCTYVGMEQFLHNPSKFSSDVQPVLQSSGYTPPLYATAAAAYMTSANPFYTNLQASGIY 382

Query: 763  SPQYVGAYPFNPTAIAPYVAAYPPHGAVPLVVDGATGSSFAPQVPGV-SPGGSISHGAEM 587
            SPQY+GAYPF+PTA+ PY+AAYPPHG+VPL VDGATGSSF PQ PG+ S  G+ISHGAEM
Sbjct: 383  SPQYIGAYPFSPTAVPPYIAAYPPHGSVPL-VDGATGSSFTPQAPGISSTAGNISHGAEM 441

Query: 586  LHASKFLGQFGFPLQPSFGDPSYMQYHQQPFVEGYGVSGHLPAPRTSFGSQIDPFDSQNS 407
            +HA+KF GQFGFPLQPSF DP YMQYHQQPFVEGYGVS HL APR S G QI PFDSQ  
Sbjct: 442  MHANKFFGQFGFPLQPSFSDPIYMQYHQQPFVEGYGVSAHLLAPRASVGGQIGPFDSQKR 501

Query: 406  LNSGAYLDDKNIHHQR---NLNSSRGGLMISSYFGHPPNMGFMMQYXXXXXXXXXXSGYP 236
             NSGAYLDDK +H+Q+   NLNS+R GL+   YFGHP N+GF+ QY          SGYP
Sbjct: 502  PNSGAYLDDKKLHNQKTGANLNSNRDGLIHPGYFGHPSNLGFVPQYPSSPLCRPVLSGYP 561

Query: 235  EGSPGLPGGRNEMKFSPASRRNGGILSGWQGQRAFDSAHDPKIANFLEELKSGKGRRFEL 56
            E SPGL GGRNEMK SPAS RNGG+LSGWQGQRAFDSAHDPKIA FLEELKSGKGRRFEL
Sbjct: 562  ESSPGLLGGRNEMKRSPASGRNGGLLSGWQGQRAFDSAHDPKIAIFLEELKSGKGRRFEL 621

Query: 55   SDIIGYIVEFSADQHGSR 2
            SDIIG+IVEFS DQHGSR
Sbjct: 622  SDIIGHIVEFSTDQHGSR 639


>ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 982

 Score =  566 bits (1458), Expect = e-159
 Identities = 289/441 (65%), Positives = 338/441 (76%), Gaps = 8/441 (1%)
 Frame = -2

Query: 1300 VVDELTDIDAGSSSSHDPPVTTLDSAKPTVGSDDIRLSSNVDPSNPVTRSSSLESTGSMG 1121
            +VD+  D++AGSSSSH PPVTT+ + KPT+G+DDIR+SS+VD   PV  SSSLESTGS+G
Sbjct: 234  LVDKPIDLEAGSSSSHGPPVTTIKAGKPTIGADDIRVSSSVDTHAPVASSSSLESTGSIG 293

Query: 1120 CSDLDVTVIESQLRALSVSNLPNLESQSNKHKWKSSFXXXXXXXXXXXN---PCEVLSTN 950
             SD  +  +ESQL+AL VSN+PN ES S + KWK+S+               P +V S N
Sbjct: 294  VSD--IATVESQLKALGVSNVPNSESLSYEEKWKASYQNNLMRHPGFQQQNNPYDVPSAN 351

Query: 949  FQSEKCTYVGMEQFVHNPSKFSSDVQPLLQSSGFTPPLHATAAAYMTSTNPFCTNLQASG 770
             Q+    YVG EQF  N SKFS+ VQPLLQSSGFTPPL+ATAAAYM+S NPF TN++ASG
Sbjct: 352  SQNLNSVYVGREQFPFNSSKFSN-VQPLLQSSGFTPPLYATAAAYMSSANPFYTNMEASG 410

Query: 769  IYSPQYVGAYPFNPTAIAPYVAAYPPHGAVPLVVDGATGSSFAPQVPGVSPGGSISHGAE 590
            IY+PQYVG Y  NPTA  PY A YPPHG +PLVVDGAT S++ P  PGVS GG+ISHGAE
Sbjct: 411  IYTPQYVGGYTVNPTAFPPYTA-YPPHGVLPLVVDGATSSNYTPLTPGVSIGGNISHGAE 469

Query: 589  MLHASKFLGQFGFPLQPSFGDPSYMQYHQQPFVEGYGVSGHLP--APRTSFGSQIDPFDS 416
            M+  +K+LGQFGFP QPSFGDP YMQYHQQPFVEGYG+SGH    APR S  SQI P+DS
Sbjct: 470  MVQTNKYLGQFGFPPQPSFGDPMYMQYHQQPFVEGYGISGHFDPLAPRASGVSQISPYDS 529

Query: 415  QNSLNSGAYLDDKNIHHQR---NLNSSRGGLMISSYFGHPPNMGFMMQYXXXXXXXXXXS 245
            Q   ++GAYLDDK +  QR   N+NS RGG+ I SYFGH PNMGF+MQY          S
Sbjct: 530  QKRSSTGAYLDDKKLTDQRTSANMNSRRGGVSIPSYFGHMPNMGFVMQYPSSPLPSPVLS 589

Query: 244  GYPEGSPGLPGGRNEMKFSPASRRNGGILSGWQGQRAFDSAHDPKIANFLEELKSGKGRR 65
            GYPEGSPGLPG RNE+K SPAS RNGG++SGWQG R+FDSAHDPK+ NFLE+LKSGKGRR
Sbjct: 590  GYPEGSPGLPGVRNEIKLSPASGRNGGVISGWQGHRSFDSAHDPKMVNFLEDLKSGKGRR 649

Query: 64   FELSDIIGYIVEFSADQHGSR 2
            FELSDIIG+IVEFS+DQHGSR
Sbjct: 650  FELSDIIGHIVEFSSDQHGSR 670


>ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 985

 Score =  563 bits (1452), Expect = e-158
 Identities = 287/441 (65%), Positives = 333/441 (75%), Gaps = 8/441 (1%)
 Frame = -2

Query: 1300 VVDELTDIDAGSSSSHDPPVTTLDSAKPTVGSDDIRLSSNVDPSNPVTRSSSLESTGSMG 1121
            + D+  D++AGSSSSH P VTT+++ K TVG+DDIR+SS+VD   PV  SSSLESTGS+G
Sbjct: 234  LADKPIDLEAGSSSSHGPSVTTIEAGKHTVGADDIRVSSSVDTHAPVASSSSLESTGSIG 293

Query: 1120 CSDLDVTVIESQLRALSVSNLPNLESQSNKHKWKSSFXXXXXXXXXXXN---PCEVLSTN 950
             +DLD+  +E QL+AL VSN PN ES S K KWK+ +               P +V S N
Sbjct: 294  VTDLDIATVEYQLKALGVSNAPNSESLSYKEKWKTGYQNNLMQRQGFQQQNNPYDVPSAN 353

Query: 949  FQSEKCTYVGMEQFVHNPSKFSSDVQPLLQSSGFTPPLHATAAAYMTSTNPFCTNLQASG 770
             Q+    Y G EQF  N +KFS+ VQPLLQSSGFTPPL+ATAAAYM+S NPF TN+QASG
Sbjct: 354  SQNVNSVYAGREQFPFNSNKFSN-VQPLLQSSGFTPPLYATAAAYMSSANPFYTNMQASG 412

Query: 769  IYSPQYVGAYPFNPTAIAPYVAAYPPHGAVPLVVDGATGSSFAPQVPGVSPGGSISHGAE 590
            IY+PQYVG Y  NPTA  PYV AYPPHGAVPLV+DGAT SS+ P  PGVS GG+ISHGAE
Sbjct: 413  IYTPQYVGGYTVNPTAFPPYVTAYPPHGAVPLVIDGATSSSYTPLTPGVSIGGNISHGAE 472

Query: 589  MLHASKFLGQFGFPLQPSFGDPSYMQYHQQPFVEGYGVSGHLP--APRTSFGSQIDPFDS 416
            M+  +K+LGQFGFP QPSFGDP YMQYHQQPFVEGYG+SGH    APR S  SQI P+DS
Sbjct: 473  MVQTNKYLGQFGFPPQPSFGDPMYMQYHQQPFVEGYGISGHFDPLAPRASGVSQISPYDS 532

Query: 415  QNSLNSGAYLDDKNIHHQR---NLNSSRGGLMISSYFGHPPNMGFMMQYXXXXXXXXXXS 245
            Q   ++GAYLDDK +  QR   N+ S RGG+ I SYFGH PNMGF+MQ+          S
Sbjct: 533  QKRPSTGAYLDDKKLPDQRTAANMTSRRGGVSIPSYFGHMPNMGFVMQHPSSPLPSPVLS 592

Query: 244  GYPEGSPGLPGGRNEMKFSPASRRNGGILSGWQGQRAFDSAHDPKIANFLEELKSGKGRR 65
            GYPEGSPGLPG RNE+  SPAS RNGGI+SGWQ QR+FDSAHDPKI NFLE+LKSGK RR
Sbjct: 593  GYPEGSPGLPGVRNEINLSPASGRNGGIISGWQVQRSFDSAHDPKIVNFLEDLKSGKSRR 652

Query: 64   FELSDIIGYIVEFSADQHGSR 2
            FELSDIIG+IVEFS+DQHGSR
Sbjct: 653  FELSDIIGHIVEFSSDQHGSR 673


>ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
            gi|355484026|gb|AES65229.1| Pumilio-like protein
            [Medicago truncatula]
          Length = 984

 Score =  540 bits (1391), Expect = e-151
 Identities = 278/439 (63%), Positives = 325/439 (74%), Gaps = 8/439 (1%)
 Frame = -2

Query: 1294 DELTDIDAGSSSSHDPPVTTLDSAKPTVGSDDIRLSSNVDPSNPVTRSSSLESTGSMGCS 1115
            D+  +++AGS SSHD   T ++SAK T G+DDIR+SS+VD   PV  SS+ E T SMG S
Sbjct: 236  DKPIELEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFS 295

Query: 1114 DLDVTVIESQLRALSVSNLPNLESQSNKHKWKSSFXXXXXXXXXXXN---PCEVLSTNFQ 944
            +LD   + SQL  LSVSNLPN E+ S + K  +S+               P EV S N Q
Sbjct: 296  NLDAATVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQ 355

Query: 943  SEKCTYVGMEQFVHNPSKFSSDVQPLLQSSGFTPPLHATAAAYMTSTNPFCTNLQASGIY 764
            S    YVG EQF HN SK   DVQPLLQSSGFTPPL+ATAAAYM S NPF  N+QASG Y
Sbjct: 356  SVNPAYVGREQFPHNSSKLP-DVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPY 414

Query: 763  SPQYVGAYPFNPTAIAPYVAAYPPHGAVPLVVDGATGSSFAPQVPGVSPGGSISHGAEML 584
            +PQYVG Y  NPTA+ PY++AYPPHGAVP VVDGAT SS+AP  PGVS GG+ISHGAEM+
Sbjct: 415  TPQYVGGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMV 474

Query: 583  HASKFLGQFGFPLQPSFGDPSYMQYHQQPFVEGYGVSGHL--PAPRTSFGSQIDPFDSQN 410
            HA+K+LGQFGFP+QPSFGDP YMQY+QQPFVEGYG+SGH    APR S   QI+P+DSQ 
Sbjct: 475  HANKYLGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASV-VQINPYDSQK 533

Query: 409  SLNSGAYLDDKNIHHQR---NLNSSRGGLMISSYFGHPPNMGFMMQYXXXXXXXXXXSGY 239
               +GAYLDDK +H QR   ++NS RGGL + +YFGH PN GF+MQY          SGY
Sbjct: 534  RPGTGAYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGY 593

Query: 238  PEGSPGLPGGRNEMKFSPASRRNGGILSGWQGQRAFDSAHDPKIANFLEELKSGKGRRFE 59
            P+GSPGL GGRNE+K SPAS RNGG+++GW G R+FDS  DPKI NFLEELKSGKGRRFE
Sbjct: 594  PDGSPGLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFE 653

Query: 58   LSDIIGYIVEFSADQHGSR 2
            LSDIIG+IVEFS+DQHGSR
Sbjct: 654  LSDIIGHIVEFSSDQHGSR 672


>ref|XP_002329673.1| predicted protein [Populus trichocarpa] gi|222870554|gb|EEF07685.1|
            predicted protein [Populus trichocarpa]
          Length = 776

 Score =  358 bits (920), Expect = 1e-96
 Identities = 209/467 (44%), Positives = 273/467 (58%), Gaps = 34/467 (7%)
 Frame = -2

Query: 1300 VVDELTDIDAGSSSSHDPPVTTLDSAKPTVGSDDIRLSSNVDPS-NPVTRSSSLESTGSM 1124
            + DE  D D  SSS  DP V+T ++    +G+  + L  N DP   PV+ S S   TG++
Sbjct: 219  MTDEPADHDIVSSSLPDPTVSTSNAVPSILGTKTVGLPLNADPLVAPVSSSLSRNRTGTI 278

Query: 1123 G---------CSDLDVTVIESQLRALSVSNLPNLESQSNKHKWKSSFXXXXXXXXXXXNP 971
                       +  DV VIE  ++ L++SNL N + Q+N+ +W+ S+            P
Sbjct: 279  QPKPPRSKGFLNTADVNVIEPGMKDLNISNLQNPKVQTNQEQWQHSYQSQVQQHQVHQQP 338

Query: 970  ---CEVLSTNFQS--EKCTYVGMEQFVHNPSKFSSDVQPLLQSSGFTPPLHATAAAYMTS 806
                +V S   Q   +   Y+ ++Q +H PSKFS++VQP+LQSSGFTPPL+ATA  YMTS
Sbjct: 339  NNSFQVQSAKSQMGHQNSAYIDVDQALHGPSKFSAEVQPVLQSSGFTPPLYATAG-YMTS 397

Query: 805  TNPFCTNLQASGIYSPQY-VGAYPFNPTAIAPYVAAYPPHGAVPLVVDGATGSSFAPQVP 629
             NPF  NLQA G+ +PQY  G Y  N   I PYVA YPPHG VP+V DG+   +F   + 
Sbjct: 398  PNPFYPNLQAPGLCAPQYGTGGYALNSNVIPPYVAGYPPHGTVPMVFDGSVSQNFNAGMS 457

Query: 628  GVSPGGSISHGAEMLHASKFLGQFGFPLQPSFGDPSYMQYHQQPFVEGYGVSGH---LPA 458
            G S GG I+HGA++ H +KF GQ G+ +QPSF DP YMQY+QQP+   Y  S     L +
Sbjct: 458  GASSGGGIAHGADVQHYNKFFGQLGYAVQPSFTDPVYMQYYQQPYGLAYNTSSQFDPLAS 517

Query: 457  PRTSFGSQIDPFDSQNSLNSGAYLDDKNIHHQR----NLNSSRGGLMISSYFGHPPNMGF 290
                 G Q +  DS+      A L+D+ + HQR    NLN  RG +M   YFG+ PNMG 
Sbjct: 518  GGGVIGRQNNAPDSKKGSEVAAGLEDQKLLHQRGGAGNLNQGRGQMMNLPYFGNSPNMG- 576

Query: 289  MMQYXXXXXXXXXXSGYPEGSPGLPGGRNEMKFSPASRRNGGILSGWQGQRAFDSAHDPK 110
            ++QY           G P G  G+ GGRNE++FSP S R   + SGW+GQR  +S +DPK
Sbjct: 577  ILQYPTSPLASPVFPGSPVGGTGISGGRNELRFSPGSGRYAAVHSGWRGQRGSESFNDPK 636

Query: 109  IANFLEELKSGKGRRFELSDIIGYIVE-----------FSADQHGSR 2
            I NFLEELKSGKGRRFELSDI+G I+E           FSADQHGSR
Sbjct: 637  IYNFLEELKSGKGRRFELSDIVGNIIEFRQLNDEDFLNFSADQHGSR 683


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