BLASTX nr result

ID: Glycyrrhiza24_contig00015261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015261
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...   135   3e-30
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a...   134   1e-29
gb|AFK46625.1| unknown [Medicago truncatula]                          133   2e-29
ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   109   2e-22

>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/113 (66%), Positives = 82/113 (72%)
 Frame = -2

Query: 384 DKLPPETIMLDPSKIGTVKPTKKEKLTMQERVTEMEAAVDAAXXXXXXXXXXXXXXXXKM 205
           DKLPPETIMLDPSKIGTVKP ++EK T QER  E+EA V+AA                K 
Sbjct: 424 DKLPPETIMLDPSKIGTVKP-RREKPTKQEREAEIEADVEAAKGKKLKKKTKGRNKPGKR 482

Query: 204 AHKKQEAIVSAKRPYLEEKIQEEENISRKKQKTTEGVELPKSLQRFARKKPSS 46
             KKQEA+   KRPYLE+KIQEEE+ISRKKQKT EGVELPKSLQRF RKK SS
Sbjct: 483 VQKKQEAVARVKRPYLEQKIQEEESISRKKQKTREGVELPKSLQRFVRKKASS 535


>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/113 (65%), Positives = 83/113 (73%)
 Frame = -2

Query: 384 DKLPPETIMLDPSKIGTVKPTKKEKLTMQERVTEMEAAVDAAXXXXXXXXXXXXXXXXKM 205
           DKLPPETIMLDPSKIGTVKP ++E+ T QER  E+EA V+AA                K 
Sbjct: 424 DKLPPETIMLDPSKIGTVKP-RRERPTKQEREAEIEAGVEAAKGMKLKKKTKGRNKPGKR 482

Query: 204 AHKKQEAIVSAKRPYLEEKIQEEENISRKKQKTTEGVELPKSLQRFARKKPSS 46
             KKQEA+   KRPYLE+KIQEEE+ISRKKQKT+E VELPKSLQRFARKK SS
Sbjct: 483 VQKKQEAVSRVKRPYLEQKIQEEESISRKKQKTSEDVELPKSLQRFARKKASS 535


>gb|AFK46625.1| unknown [Medicago truncatula]
          Length = 259

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/113 (63%), Positives = 82/113 (72%)
 Frame = -2

Query: 384 DKLPPETIMLDPSKIGTVKPTKKEKLTMQERVTEMEAAVDAAXXXXXXXXXXXXXXXXKM 205
           DKLPPETIMLDPSKIGTVK +K EK T QE   EMEAAV+A                 K+
Sbjct: 147 DKLPPETIMLDPSKIGTVKYSKTEKPTAQEIEAEMEAAVEAVKGKKLKKKTKGRSKAGKI 206

Query: 204 AHKKQEAIVSAKRPYLEEKIQEEENISRKKQKTTEGVELPKSLQRFARKKPSS 46
             KKQ+AI +AKRPYLE+KIQEE+N+++KKQKT EG ELPKSLQRF  KKPSS
Sbjct: 207 KPKKQDAIANAKRPYLEQKIQEEKNLAKKKQKTNEGGELPKSLQRFVHKKPSS 259


>ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
 Frame = -2

Query: 384 DKLPPETIMLDPSKIGTVKPTKK-EKLTMQERVTEMEAAVDAAXXXXXXXXXXXXXXXXK 208
           DKLPPETIMLDPSKIGTVK  KK EK T +E   +MEAAV+AA                K
Sbjct: 424 DKLPPETIMLDPSKIGTVKSAKKKEKPTKKEMEADMEAAVEAAKGTAIKNKTKGKNKPSK 483

Query: 207 MAHKKQEAIVSAKRPYLEEKIQEEENISRKKQKTTEGVELPKSLQRFARKKPSS 46
           +A KK+E +V AK+P+L+++++EEE +++KKQK +E + LP +LQRFARKK ++
Sbjct: 484 IAVKKKEIVVRAKKPFLDQQMKEEEKVAKKKQKISEEISLPTALQRFARKKATA 537


>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/114 (54%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = -2

Query: 384 DKLPPETIMLDPSKIGTVKPTKK-EKLTMQERVTEMEAAVDAAXXXXXXXXXXXXXXXXK 208
           DKLPPETIMLDP+KIGTV+ ++K EK T QER  EMEAAV+ A                K
Sbjct: 498 DKLPPETIMLDPTKIGTVRQSRKREKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNKPSK 557

Query: 207 MAHKKQEAIVSAKRPYLEEKIQEEENISRKKQKTTEGVELPKSLQRFARKKPSS 46
              K++EA+  AK+P+LE ++ EEEN+S KKQK +  +ELPKSLQRFARKK ++
Sbjct: 558 KVKKREEAVARAKKPFLERQM-EEENLSTKKQKISGEIELPKSLQRFARKKATT 610


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