BLASTX nr result

ID: Glycyrrhiza24_contig00015188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015188
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH47224.1| similar to 50S ribosomal protein L35 [Lupinus an...   157   4e-36
ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatu...   151   2e-34
ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycin...   144   3e-32
ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808...   137   4e-30
gb|ACU24149.1| unknown [Glycine max]                                  135   1e-29

>emb|CCH47224.1| similar to 50S ribosomal protein L35 [Lupinus angustifolius]
          Length = 196

 Score =  157 bits (396), Expect = 4e-36
 Identities = 95/165 (57%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
 Frame = +2

Query: 92  MQRWLTKLCCFAVQ-SRQALPPPSCRRLIXXXXXXXXXXXXXSTNRISRPPFNFSSWPLQ 268
           MQR  TKL  FAV  SRQ+LP PS RR               STN ISRP FNFSS+  Q
Sbjct: 1   MQRCATKLRSFAVNYSRQSLPTPSPRRFFHHAPPQPFIHSLASTNLISRPIFNFSSFSPQ 60

Query: 269 YASISRPSPFSPSL-VQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXXRFRTMND 445
                RPSPF  SL VQVRHVSSRERKKRRKPMTPVTSKL             RFR MND
Sbjct: 61  SF---RPSPFPTSLLVQVRHVSSRERKKRRKPMTPVTSKLKKTKMKSYSSFKLRFRVMND 117

Query: 446 GNIRRWREGKRHNAHXXXXXXXXXXXXPAIVPAAYAKVMKKLSFC 580
           GNIRRW+EGKRHNAH            P IVPAAYAK +K L  C
Sbjct: 118 GNIRRWKEGKRHNAHLKSKISKRRLRKPGIVPAAYAKFLKGLKGC 162


>ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|355513993|gb|AES95616.1| 50S ribosomal protein L35
           [Medicago truncatula]
          Length = 157

 Score =  151 bits (381), Expect = 2e-34
 Identities = 94/166 (56%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MMQRWLTKLCCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXXSTNRISRPPFNFSSWPLQ 268
           MMQR L KL   AVQS Q    PS RR +             S N ISRP FNFS   L 
Sbjct: 1   MMQRLLPKLRSLAVQSLQ----PSSRRFLHHSLPQPLHSA--SINPISRPLFNFSPSSLH 54

Query: 269 YASISRPSPFSPSLV-QVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXXRFRTMND 445
               S PSPFSPSLV QVRHVSSRERKK+RKPMTPV SKL             RFR MND
Sbjct: 55  K---SLPSPFSPSLVLQVRHVSSRERKKKRKPMTPVKSKLKKTKMKSYSSYKSRFRLMND 111

Query: 446 GNIRRWREGKRHNAHXXXXXXXXXXXXPAIVPAAYAKVMKKLSFCG 583
           G  RRWREGKRHNAH            PA+VP AYAKVMKKL FCG
Sbjct: 112 GTFRRWREGKRHNAHLKSKIAKRRLRLPALVPVAYAKVMKKLGFCG 157


>ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
           gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score =  144 bits (363), Expect = 3e-32
 Identities = 90/163 (55%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
 Frame = +2

Query: 92  MQRWLTKLCCFA-VQSRQALPPPSCRRLIXXXXXXXXXXXXXSTNRISRPPFNFSSWPLQ 268
           M R LTKL CFA VQSRQ L PPS RRL+             S  RISRP F  SSWPL 
Sbjct: 1   MLRSLTKLRCFAAVQSRQVLSPPSSRRLLHHSPPPQPLHSA-SNFRISRPSFISSSWPLH 59

Query: 269 YASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXXRFRTMNDG 448
               S PSP   SLVQVRH SS+ERK  RKP+ P  SK+             RFRTMNDG
Sbjct: 60  ---ASHPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRTMNDG 111

Query: 449 NIRRWREGKRHNAHXXXXXXXXXXXXPAIVPAAYAKVMKKLSF 577
           NIRRW+EGKRHNAH            P IVP AYAKVMKKL+F
Sbjct: 112 NIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKVMKKLNF 154


>ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
          Length = 155

 Score =  137 bits (345), Expect = 4e-30
 Identities = 86/162 (53%), Positives = 93/162 (57%)
 Frame = +2

Query: 92  MQRWLTKLCCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXXSTNRISRPPFNFSSWPLQY 271
           M R LTKL C AVQSRQ L PPS RRL+             S  RIS P F FS  P   
Sbjct: 1   MLRSLTKLRCLAVQSRQVLSPPSSRRLLHHLPPPQSLHSA-SNFRISSPSFIFSWCP--- 56

Query: 272 ASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXXRFRTMNDGN 451
              S+PSP   SLVQVRH SS+ERK  RKP+ P  SK+             RFR MNDGN
Sbjct: 57  PHASQPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGN 111

Query: 452 IRRWREGKRHNAHXXXXXXXXXXXXPAIVPAAYAKVMKKLSF 577
           IRRW+EGKRHNAH            P IVPAAYAKVMKKL+F
Sbjct: 112 IRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYAKVMKKLNF 153


>gb|ACU24149.1| unknown [Glycine max]
          Length = 155

 Score =  135 bits (341), Expect = 1e-29
 Identities = 85/162 (52%), Positives = 92/162 (56%)
 Frame = +2

Query: 92  MQRWLTKLCCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXXSTNRISRPPFNFSSWPLQY 271
           M R LTKL C AVQSRQ L PPS RRL+             S  RIS P F FS  P   
Sbjct: 1   MLRSLTKLRCLAVQSRQVLSPPSSRRLLHHLPPPQSLHSA-SNFRISSPSFIFSWCP--- 56

Query: 272 ASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXXRFRTMNDGN 451
              S+PSP   SLVQVRH SS+ERK  RKP+ P  SK+             RFR MNDGN
Sbjct: 57  PHASQPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGN 111

Query: 452 IRRWREGKRHNAHXXXXXXXXXXXXPAIVPAAYAKVMKKLSF 577
           IRRW+EGKRHNAH            P IVPAAY KVMKKL+F
Sbjct: 112 IRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYTKVMKKLNF 153


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