BLASTX nr result

ID: Glycyrrhiza24_contig00015172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015172
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551522.1| PREDICTED: copper transporter 1-like [Glycin...   235   7e-60
ref|XP_003530241.1| PREDICTED: copper transporter 6-like [Glycin...   216   6e-54
ref|XP_002534182.1| copper transporter, putative [Ricinus commun...   117   4e-24
ref|XP_002309100.1| copper transporter [Populus trichocarpa] gi|...   116   5e-24
ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinif...   114   2e-23

>ref|XP_003551522.1| PREDICTED: copper transporter 1-like [Glycine max]
          Length = 150

 Score =  235 bits (600), Expect = 7e-60
 Identities = 121/153 (79%), Positives = 126/153 (82%)
 Frame = +2

Query: 77  MTVTATEDGVPATPYNSTVATRLGRRRIPINTTLYWGHKVDILFHCWPGDSAAMYXXXXX 256
           M  TAT DGVP TPYNSTVAT LGRRRIPI+TT YWGHKVDILF CWPGDSAAMY     
Sbjct: 1   MFSTATADGVP-TPYNSTVATMLGRRRIPIHTTFYWGHKVDILFRCWPGDSAAMYAVALL 59

Query: 257 XXXXXXXXXEWLSFTNIVKLKPGGSNDVVGALLRTGLYGVRSGLSYLVMLAVMSFNGGVF 436
                    EWLSFTNIVKLKPGGSNDVVG LL+TGLYGVRSGLSY+VMLAVMSFNGGVF
Sbjct: 60  LVFFMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYMVMLAVMSFNGGVF 119

Query: 437 LAAIGGHVIGFLVFGTRAIRKKSGGLDLDSSKP 535
           + AI GHVIGFL+FGTRAIRKKS G  LDSSKP
Sbjct: 120 VVAICGHVIGFLIFGTRAIRKKSDG--LDSSKP 150


>ref|XP_003530241.1| PREDICTED: copper transporter 6-like [Glycine max]
          Length = 189

 Score =  216 bits (549), Expect = 6e-54
 Identities = 109/142 (76%), Positives = 115/142 (80%)
 Frame = +2

Query: 116 PYNSTVATRLGRRRIPINTTLYWGHKVDILFHCWPGDSAAMYXXXXXXXXXXXXXXEWLS 295
           PYNSTVAT LGRRRIPI+TT YWGHKVDILF CWPGDS AMY              EWLS
Sbjct: 2   PYNSTVATMLGRRRIPIHTTFYWGHKVDILFRCWPGDSTAMYAVALLLVFFMAVLVEWLS 61

Query: 296 FTNIVKLKPGGSNDVVGALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLV 475
           FTNIVKLK  GSNDVVG LL+TGLYGVRSGLSY+VMLAVMSFNGGVF+ AI GHVIGFL+
Sbjct: 62  FTNIVKLKSRGSNDVVGGLLKTGLYGVRSGLSYMVMLAVMSFNGGVFVVAICGHVIGFLI 121

Query: 476 FGTRAIRKKSGGLDLDSSKP*D 541
           FGTRA+RKKS G  LDSSKP D
Sbjct: 122 FGTRAMRKKSDG--LDSSKPHD 141


>ref|XP_002534182.1| copper transporter, putative [Ricinus communis]
           gi|223525742|gb|EEF28206.1| copper transporter, putative
           [Ricinus communis]
          Length = 163

 Score =  117 bits (292), Expect = 4e-24
 Identities = 54/123 (43%), Positives = 75/123 (60%)
 Frame = +2

Query: 152 RRIPINTTLYWGHKVDILFHCWPGDSAAMYXXXXXXXXXXXXXXEWLSFTNIVKLKPGGS 331
           R+   + T +WGH  ++LF  WPG S+ MY              EW ++ +I+K    G+
Sbjct: 37  RKALTHMTFFWGHTTEVLFKGWPGSSSGMYALALIFVFVLAVVVEWFNYCSIIK---PGT 93

Query: 332 NDVVGALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLVFGTRAIRKKSGG 511
           N V     RTG++ VR+GLSY+VMLAVMSFNGG+FLAA+GGH +GF +FG++   K    
Sbjct: 94  NKVAAGFFRTGMHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFSLFGSKVFNKSEKK 153

Query: 512 LDL 520
            DL
Sbjct: 154 PDL 156


>ref|XP_002309100.1| copper transporter [Populus trichocarpa]
           gi|222855076|gb|EEE92623.1| copper transporter [Populus
           trichocarpa]
          Length = 114

 Score =  116 bits (291), Expect = 5e-24
 Identities = 58/116 (50%), Positives = 73/116 (62%)
 Frame = +2

Query: 164 INTTLYWGHKVDILFHCWPGDSAAMYXXXXXXXXXXXXXXEWLSFTNIVKLKPGGSNDVV 343
           ++ T +WGHK ++LF  WPG S  MY              E  S  +++K    G+N   
Sbjct: 3   MHMTFFWGHKTEVLFKGWPGSSTGMYAVALTFVFALAILVEVFSLFSVIK---PGTNKAA 59

Query: 344 GALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLVFGTRAIRKKSGG 511
               +TG+Y VRSGLSY+VMLAVMSFNGGVFLAA+GGH +GF +FG RA  KKSGG
Sbjct: 60  AGFFQTGMYAVRSGLSYMVMLAVMSFNGGVFLAAVGGHAVGFALFGGRA--KKSGG 113


>ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496072|gb|ADW93913.1| copper transporter [Vitis
           vinifera]
          Length = 152

 Score =  114 bits (285), Expect = 2e-23
 Identities = 56/112 (50%), Positives = 73/112 (65%)
 Frame = +2

Query: 164 INTTLYWGHKVDILFHCWPGDSAAMYXXXXXXXXXXXXXXEWLSFTNIVKLKPGGSNDVV 343
           I+ T +WG   +ILF  WPG S+ MY              EWLS +++  LKPG  N   
Sbjct: 28  IHMTFFWGKNAEILFSGWPGTSSGMYALALILVFVVALLLEWLSRSSL--LKPGPHNVTT 85

Query: 344 GALLRTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLVFGTRAIRK 499
           G LL+T LY +RSG SY++MLAVMSFNGG+FLAA+ GH +GFL+FG+R  +K
Sbjct: 86  G-LLQTALYAIRSGFSYMLMLAVMSFNGGIFLAAVAGHALGFLIFGSRVFKK 136


Top