BLASTX nr result

ID: Glycyrrhiza24_contig00015155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015155
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34587.1| unknown [Medicago truncatula]                           94   2e-17
gb|ACJ83941.1| unknown [Medicago truncatula]                           94   2e-17
ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|...    92   8e-17
ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|...    91   3e-16
gb|ACU22934.1| unknown [Glycine max]                                   72   9e-14

>gb|AFK34587.1| unknown [Medicago truncatula]
          Length = 248

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 41/49 (83%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   YTHIFNKVREEKHVGAGHAPGTPNGRSYVIPNQPANNKAQSCCFCWSRK 148
           YTHIFNKVREEKHV AG+ PGTPNGRSYVI NQPAN+KAQ CCF W RK
Sbjct: 200 YTHIFNKVREEKHVAAGNTPGTPNGRSYVIRNQPANDKAQGCCFFWGRK 248


>gb|ACJ83941.1| unknown [Medicago truncatula]
          Length = 248

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 41/49 (83%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   YTHIFNKVREEKHVGAGHAPGTPNGRSYVIPNQPANNKAQSCCFCWSRK 148
           YTHIFNKVREEKHV AG+ PGTPNGRSYVI NQPAN+KAQ CCF W RK
Sbjct: 200 YTHIFNKVREEKHVAAGNTPGTPNGRSYVIRNQPANDKAQGCCFFWGRK 248


>ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|ACU24535.1| unknown
           [Glycine max] gi|300079889|gb|ADJ67470.1| RIN4d protein
           [Glycine max]
          Length = 248

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 39/49 (79%), Positives = 41/49 (83%)
 Frame = +2

Query: 2   YTHIFNKVREEKHVGAGHAPGTPNGRSYVIPNQPANNKAQSCCFCWSRK 148
           YTHIFNKVREEK VGAGH PGTPNGR Y   NQ AN+KAQSCCFCW +K
Sbjct: 200 YTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDKAQSCCFCWGKK 248


>ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|ADJ67469.1| RIN4c
           protein [Glycine max]
          Length = 246

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 38/49 (77%), Positives = 41/49 (83%)
 Frame = +2

Query: 2   YTHIFNKVREEKHVGAGHAPGTPNGRSYVIPNQPANNKAQSCCFCWSRK 148
           YTHIFNKVREEK VGAGH P TPNGR Y   NQPA++KAQSCCFCW +K
Sbjct: 198 YTHIFNKVREEKQVGAGHVPVTPNGRQYAARNQPADDKAQSCCFCWGKK 246


>gb|ACU22934.1| unknown [Glycine max]
          Length = 122

 Score = 71.6 bits (174), Expect(2) = 9e-14
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -1

Query: 142 APAKAATLSLVIGGLVRDNIRSPIRRAWRMSSPNVFLLPHFVENVSI 2
           APAKAATLS V+G LV  +I SPIRR W +SSP++FLLPHFVENVS+
Sbjct: 44  APAKAATLSFVVGRLVPSSILSPIRRNWHVSSPHLFLLPHFVENVSV 90



 Score = 31.2 bits (69), Expect(2) = 9e-14
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = -3

Query: 218 THLMTIHNTILIFFSVQNIIQA 153
           THLMTIHN I I  SVQNII A
Sbjct: 17  THLMTIHNPIFI-SSVQNIIHA 37


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