BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015153
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   101   7e-20
gb|AFK41205.1| unknown [Lotus japonicus]                               91   1e-16
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...    88   6e-16
ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 ...    84   2e-14
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ...    84   2e-14

>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = -2

Query: 325 LFSDEFRTDYRDIAKDLKMSSVHLREPYVHLGCKISHQKNISYATLPVPLKFPDLRQKKR 146
           LFSDEFRTDY DIAKDL M+ + +R+ Y HLGCKIS QKNI YATLPVPLKFP+LRQ+KR
Sbjct: 363 LFSDEFRTDYTDIAKDLSMNILPVRQLYEHLGCKISRQKNIFYATLPVPLKFPELRQRKR 422

Query: 145 KR 140
           KR
Sbjct: 423 KR 424


>gb|AFK41205.1| unknown [Lotus japonicus]
          Length = 347

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -2

Query: 325 LFSDEFRTDYRDIAKDLKMSSVHLREPYVHLGCKISHQKNISYATLPVPLKFPDLRQKKR 146
           LFSDEFRTDY DI+KDL+MS + +R+ Y  LGCK   Q  ISYATLPVPLKFPD +Q+KR
Sbjct: 286 LFSDEFRTDYTDISKDLRMSVLLVRQHYSDLGCKFLSQNKISYATLPVPLKFPDSKQRKR 345

Query: 145 KR 140
           KR
Sbjct: 346 KR 347


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 412

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = -2

Query: 325 LFSDEFRTDYRDIAKDLKMSSVHLREPYVHLGCKISHQKNISYATLPVPLKFPDLRQKKR 146
           LFSD+FRTDYRDIAKDL+M+++ LR  + HLGCK+   + +SYATLP+PL FP +RQ+K+
Sbjct: 347 LFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCKLISSQKVSYATLPIPLTFPQIRQRKK 406

Query: 145 K 143
           K
Sbjct: 407 K 407


>ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484107|gb|AES65310.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 263

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/61 (59%), Positives = 50/61 (81%)
 Frame = -2

Query: 325 LFSDEFRTDYRDIAKDLKMSSVHLREPYVHLGCKISHQKNISYATLPVPLKFPDLRQKKR 146
           LFSD+FRTDYRDIAKDL+M+++ LR  + HLGCK+   + +SYATLP+PL F  ++++KR
Sbjct: 198 LFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCKLISSQKVSYATLPIPLTFSQIKKRKR 257

Query: 145 K 143
           K
Sbjct: 258 K 258


>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484106|gb|AES65309.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 411

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/61 (59%), Positives = 50/61 (81%)
 Frame = -2

Query: 325 LFSDEFRTDYRDIAKDLKMSSVHLREPYVHLGCKISHQKNISYATLPVPLKFPDLRQKKR 146
           LFSD+FRTDYRDIAKDL+M+++ LR  + HLGCK+   + +SYATLP+PL F  ++++KR
Sbjct: 346 LFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCKLISSQKVSYATLPIPLTFSQIKKRKR 405

Query: 145 K 143
           K
Sbjct: 406 K 406