BLASTX nr result

ID: Glycyrrhiza24_contig00015150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015150
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240022.1| uncharacterized protein LOC100777544 [Glycin...    68   7e-10
ref|XP_003542351.1| PREDICTED: nuclear transcription factor Y su...    65   6e-09
ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y su...    58   7e-07
gb|AFK49645.1| nuclear transcription factor Y subunit A3 [Medica...    56   3e-06
gb|AFK41890.1| unknown [Medicago truncatula]                           56   3e-06

>ref|NP_001240022.1| uncharacterized protein LOC100777544 [Glycine max]
           gi|255641009|gb|ACU20784.1| unknown [Glycine max]
          Length = 213

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 7/56 (12%)
 Frame = +3

Query: 144 DTMDNCSQLDCSHPMNHAPYPYGDPFFGGSLVAHGP-------VPESIMLGLASTR 290
           D+M NCSQ+ CSHPM H  YP GDP+FG S+VA+GP       VP+  MLGLASTR
Sbjct: 10  DSMYNCSQVGCSHPMAHTSYPCGDPYFGSSIVAYGPQAINQQMVPQ--MLGLASTR 63


>ref|XP_003542351.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           2 [Glycine max] gi|356547919|ref|XP_003542352.1|
           PREDICTED: nuclear transcription factor Y subunit
           A-3-like isoform 3 [Glycine max]
          Length = 233

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
 Frame = +3

Query: 132 LVEPDTMDNCSQLDCSHPMNHAPYPYGDPFFGGSLVAHGP-------VPESIMLGLASTR 290
           L  PDTM NCSQ+ CSH + H  YP GDP+FG S+VA+G        VP+  MLGLASTR
Sbjct: 6   LSHPDTMYNCSQVYCSHSLAHTSYPCGDPYFGSSIVAYGTQAITQQMVPQ--MLGLASTR 63


>ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y subunit A-3-like [Glycine
           max]
          Length = 228

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +3

Query: 141 PDTMDNCSQLDCSHPMNHAPYPYGDPF--FGGSLVAHGPVPESIMLGLASTR 290
           PDT  NCSQ+DC+H M H+ YPYGDP   +G   ++H P     MLGLASTR
Sbjct: 10  PDTEINCSQVDCNHSMAHSSYPYGDPILAYGPQAISH-PQMVPQMLGLASTR 60


>gb|AFK49645.1| nuclear transcription factor Y subunit A3 [Medicago truncatula]
          Length = 235

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = +3

Query: 129 SLVEPDTMDNCSQLDCSHPM--NHAPYPYGDPFFGGSLVAHGP----VPESI--MLGLAS 284
           SL  PDT  NCSQ+D +  M   HA YPY DP F GSLVA+ P     P+ +  M+GLAS
Sbjct: 6   SLNHPDTEFNCSQVDHNQSMAQTHAHYPYSDPIFAGSLVAYAPHAVNQPQMLPQMMGLAS 65

Query: 285 TR 290
           TR
Sbjct: 66  TR 67


>gb|AFK41890.1| unknown [Medicago truncatula]
          Length = 233

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = +3

Query: 129 SLVEPDTMDNCSQLDCSHPM--NHAPYPYGDPFFGGSLVAHGP----VPESI--MLGLAS 284
           SL  PDT  NCSQ+D +  M   HA YPY DP F GSLVA+ P     P+ +  M+GLAS
Sbjct: 6   SLNHPDTEFNCSQVDHNQSMAQTHAHYPYSDPIFAGSLVAYAPHAVNQPQMLPQMMGLAS 65

Query: 285 TR 290
           TR
Sbjct: 66  TR 67


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