BLASTX nr result

ID: Glycyrrhiza24_contig00015148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015148
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619792.1| Plastid DNA-binding protein [Medicago trunca...   206   4e-51
ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...    60   5e-07
emb|CBI26400.3| unnamed protein product [Vitis vinifera]               60   5e-07

>ref|XP_003619792.1| Plastid DNA-binding protein [Medicago truncatula]
           gi|355494807|gb|AES76010.1| Plastid DNA-binding protein
           [Medicago truncatula]
          Length = 378

 Score =  206 bits (525), Expect = 4e-51
 Identities = 122/250 (48%), Positives = 155/250 (62%), Gaps = 25/250 (10%)
 Frame = -3

Query: 762 DSVAPESQLLQEEIEHVSTSFSEHHDTVYGKTQGHESEFVDMENHQKMEEYCI--EKAG- 592
           + V  ES+L   E  +VS   SE+ +T   +    +S+ V +++ + +   C   EK G 
Sbjct: 132 EKVLDESKLKTAESVNVS---SENIETAKDRPIQKDSQSVLLDDKEAVNTCCELEEKRGP 188

Query: 591 ----------YEI------------REQPTLEDLSGQASHSSPQVRNDVNTVEAVSSCPP 478
                     YE+            REQP LED+ G+ASHS+ +V NDV + E VSSCP 
Sbjct: 189 QTFSQEGRLSYEVETISTTVSIDKRREQPALEDMYGKASHSNSEVTNDVKSDETVSSCPS 248

Query: 477 DYVAPERHLLKEEIEQDSAPFIEXXXXXXXXXXXXXXKFADIENHPTIEKKSFEKAGYEG 298
           DYVAPE HLLKEEIEQ SAP +E              K  DI+NHPTI+ KSF+KAG E 
Sbjct: 249 DYVAPEIHLLKEEIEQVSAPIVEKSGSSCSKDHIHDSKSVDIKNHPTIKIKSFDKAGLER 308

Query: 297 KAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNVAVVSQKSTLWGNLKSFA 118
           K QD  +DLP VDSP+H KEQ QES ++DESKID S  +E++VAV S KSTLWGNLKSFA
Sbjct: 309 KVQDGAQDLPVVDSPQHIKEQSQESLKLDESKIDGSNMRESSVAVASDKSTLWGNLKSFA 368

Query: 117 DGIINIWRKL 88
           DG++N+WRKL
Sbjct: 369 DGVLNMWRKL 378



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -3

Query: 861 ESNYLEKNFEEPYPSSLQKPNGVKTEEAVSSY-SDSVAPESQLLQEEIEHVSTSFSEHHD 685
           E   LE  + +   S+ +  N VK++E VSS  SD VAPE  LL+EEIE VS    E   
Sbjct: 215 EQPALEDMYGKASHSNSEVTNDVKSDETVSSCPSDYVAPEIHLLKEEIEQVSAPIVEKSG 274

Query: 684 TVYGKTQGHESEFVDMENHQKMEEYCIEKAGYEIREQPTLEDL 556
           +   K   H+S+ VD++NH  ++    +KAG E + Q   +DL
Sbjct: 275 SSCSKDHIHDSKSVDIKNHPTIKIKSFDKAGLERKVQDGAQDL 317


>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = -3

Query: 297 KAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNVAVVSQKSTLWGNLKSFA 118
           K + A E L   D  KH+ EQ Q S E+D+   D S+ +  N   + + ST+W NLKSFA
Sbjct: 269 KEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQ--NEEELPKGSTVWANLKSFA 326

Query: 117 DGIINIWRKL 88
            GIIN+WRKL
Sbjct: 327 GGIINMWRKL 336


>emb|CBI26400.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = -3

Query: 297 KAQDALEDLPGVDSPKHKKEQYQESSEMDESKIDSSKNKETNVAVVSQKSTLWGNLKSFA 118
           K + A E L   D  KH+ EQ Q S E+D+   D S+ +  N   + + ST+W NLKSFA
Sbjct: 259 KEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQ--NEEELPKGSTVWANLKSFA 316

Query: 117 DGIINIWRKL 88
            GIIN+WRKL
Sbjct: 317 GGIINMWRKL 326


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