BLASTX nr result

ID: Glycyrrhiza24_contig00015141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015141
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like ...   241   6e-62
ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   235   3e-60
ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   196   2e-48
ref|XP_003596940.1| Condensin complex subunit [Medicago truncatu...   193   1e-47
emb|CBI28838.3| unnamed protein product [Vitis vinifera]              166   2e-39

>ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like [Glycine max]
          Length = 668

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/134 (84%), Positives = 122/134 (91%)
 Frame = -3

Query: 404 KLPEDCHYQPEDLVKLFLLPDVKCLGRRAKRFSDGPREQCNEYESFPSWDNGSVCGDEAG 225
           KLPEDCHYQPEDLVKLFLL +VKCLGR+A RFSDG REQ +EYESFPSWDNGSVCGD+AG
Sbjct: 478 KLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSDEYESFPSWDNGSVCGDDAG 537

Query: 224 DYEGDHHSDMEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQESAKLPIQG 45
           DY GD H DMED  TL+TQPRQVSKIEVQYDKTSKQVDV ALKITLWDHVQES KLP++G
Sbjct: 538 DYGGDLHGDMEDTDTLVTQPRQVSKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPLEG 597

Query: 44  QKEMVSFRNILANF 3
           QK+ +SFRNILANF
Sbjct: 598 QKDTLSFRNILANF 611


>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score =  235 bits (599), Expect = 3e-60
 Identities = 113/138 (81%), Positives = 123/138 (89%), Gaps = 4/138 (2%)
 Frame = -3

Query: 404 KLPEDCHYQPEDLVKLFLLPDVKCLGRRAKRFS----DGPREQCNEYESFPSWDNGSVCG 237
           KLPEDCHYQPEDLVKLFLL +VKCLGR+A RFS    +G REQ NEYESFPSWDNGSVCG
Sbjct: 486 KLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSGKICNGSREQSNEYESFPSWDNGSVCG 545

Query: 236 DEAGDYEGDHHSDMEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQESAKL 57
           D+AGDY GD HSDMED  TLITQPRQV+KIEVQYDKTSKQVDV ALKITLWDHVQES KL
Sbjct: 546 DDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESVKL 605

Query: 56  PIQGQKEMVSFRNILANF 3
           P++GQK+ +SF+NILANF
Sbjct: 606 PLEGQKDTLSFKNILANF 623


>ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 685

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/138 (66%), Positives = 115/138 (83%), Gaps = 4/138 (2%)
 Frame = -3

Query: 404 KLPEDCHYQPEDLVKLFLLPDVKCLGRRAKR----FSDGPREQCNEYESFPSWDNGSVCG 237
           KLPEDCHY+PEDLV LFLLP VKC+GR+A++    F+D   EQCN YESFPSWDNGSVC 
Sbjct: 495 KLPEDCHYEPEDLVNLFLLPYVKCIGRKARKLSGEFADVSGEQCNNYESFPSWDNGSVCD 554

Query: 236 DEAGDYEGDHHSDMEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQESAKL 57
           D+  D     HS+M+D  +LI+QPRQ++K+EVQYDKT KQV+VQALKITLWDH+QES ++
Sbjct: 555 DDVTDV----HSEMDDSTSLISQPRQINKVEVQYDKTFKQVNVQALKITLWDHIQESVQV 610

Query: 56  PIQGQKEMVSFRNILANF 3
           PIQG+KE+VSF+++L NF
Sbjct: 611 PIQGKKEVVSFKHMLTNF 628


>ref|XP_003596940.1| Condensin complex subunit [Medicago truncatula]
           gi|355485988|gb|AES67191.1| Condensin complex subunit
           [Medicago truncatula]
          Length = 664

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/138 (68%), Positives = 112/138 (81%), Gaps = 4/138 (2%)
 Frame = -3

Query: 404 KLPEDCHYQPEDLVKLFLLPDVKCLGRRAKRFS----DGPREQCNEYESFPSWDNGSVCG 237
           KLPEDCHY+PE+LVKLFLLPDVKCLGRR ++ S    DG  EQCN  E F SWDNGSVC 
Sbjct: 483 KLPEDCHYEPENLVKLFLLPDVKCLGRRTRKLSGVYTDGSTEQCNNNEPFNSWDNGSVCD 542

Query: 236 DEAGDYEGDHHSDMEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQESAKL 57
              G+Y+ D HSDM+D  TLI+Q RQ++KIEVQYDKTSKQVDVQALK+TLW+H++ES  L
Sbjct: 543 ---GEYD-DAHSDMDDSSTLISQARQINKIEVQYDKTSKQVDVQALKLTLWNHIEESVHL 598

Query: 56  PIQGQKEMVSFRNILANF 3
             QG+KE VSFR++LANF
Sbjct: 599 RFQGEKETVSFRDVLANF 616


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/134 (62%), Positives = 108/134 (80%)
 Frame = -3

Query: 404 KLPEDCHYQPEDLVKLFLLPDVKCLGRRAKRFSDGPREQCNEYESFPSWDNGSVCGDEAG 225
           KLPEDCHYQPE+LVKLFLLP++ CLGRR +RFSD  R+Q +++   PSWD+ +   D+A 
Sbjct: 482 KLPEDCHYQPENLVKLFLLPNIMCLGRRRRRFSDESRQQVDDFGVSPSWDDENGF-DDAF 540

Query: 224 DYEGDHHSDMEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKITLWDHVQESAKLPIQG 45
           D  G+ HSD+ED  TL++QPRQV+KIEVQYDKTSKQVDVQALK TLW H+Q+S +  ++ 
Sbjct: 541 D-NGNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWGHMQKSTQSSVK- 598

Query: 44  QKEMVSFRNILANF 3
            +E VSFR+ILA+F
Sbjct: 599 DEEAVSFRHILASF 612


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