BLASTX nr result

ID: Glycyrrhiza24_contig00015126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015126
         (2108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   827   0.0  
ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicag...   814   0.0  
ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   813   0.0  
ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   613   e-173
ref|XP_004155399.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   588   e-165

>ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 579

 Score =  827 bits (2135), Expect = 0.0
 Identities = 450/594 (75%), Positives = 484/594 (81%), Gaps = 1/594 (0%)
 Frame = -3

Query: 2079 MIITRTSALMLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSPFINRKPRSFFSSQTRAFG 1900
            MI+TR SALMLHLQNPPIRYH  FFSHF+++          PF    PR    +QTR F 
Sbjct: 1    MIVTR-SALMLHLQNPPIRYH--FFSHFSYAPTFPTLFKPRPFSPTTPRQ---AQTRTF- 53

Query: 1899 XXXXXXXXSPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQASSIPS 1720
                    S   GS G RDTFFAEE+V WSSLGLSDT+S ALSNIGL+RPSLVQASS+PS
Sbjct: 54   VSAVASSSSAAHGSNG-RDTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVPS 112

Query: 1719 VLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHTGSDQEVSPSRKVLLVLCPNVQ 1540
            VL GKDV+IAAETGSGKTYSYLVPLIDKLR+A+EHSLH   DQ+V+  + VLLVLCPNVQ
Sbjct: 113  VLLGKDVIIAAETGSGKTYSYLVPLIDKLRDAQEHSLHAVLDQKVTSPQNVLLVLCPNVQ 172

Query: 1539 LCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVDRHRRME 1360
            LCEQVVRMANSLCRD+GETIVSVAAICG+QGWPI+EPDVIVTTPAALLNYVD+DR RRME
Sbjct: 173  LCEQVVRMANSLCRDDGETIVSVAAICGKQGWPIREPDVIVTTPAALLNYVDLDRTRRME 232

Query: 1359 FMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVAELPMXXXXXXXSH 1180
            FMRGVKYVVFDEAD+LLCGSFQNKVIRLINLLRFDEKLLSRSK SVAE PM       S 
Sbjct: 233  FMRGVKYVVFDEADLLLCGSFQNKVIRLINLLRFDEKLLSRSKKSVAEFPMKQEFSLSSE 292

Query: 1179 DALEVEEELPTEATSEXXXXXXXXXXXXXXDIANINNEALSVXXXXXXXXXXXXXXXKQY 1000
            DA E EEEL TEA SE               I +INNEA +V               KQY
Sbjct: 293  DAFEGEEELQTEAISEDDDNDKED-------IVDINNEAGNVKLRDWRRVRKNYERSKQY 345

Query: 999  VFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVDELIKA 820
            VFVAATLP NGKKTAG +LK+MFPDAEWV GNYLHCHNPRL+Q+WIEV VDTQVDELIKA
Sbjct: 346  VFVAATLPVNGKKTAGGVLKYMFPDAEWVCGNYLHCHNPRLEQKWIEVMVDTQVDELIKA 405

Query: 819  VKHSFGYEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYHKNCTLEERAQTLV 640
            V H F  EDL NAGGIHRTMVFANTVEAVEAVAKIL++SGIEC RYHKNCTLEERAQTLV
Sbjct: 406  VNHRFRSEDLVNAGGIHRTMVFANTVEAVEAVAKILLRSGIECSRYHKNCTLEERAQTLV 465

Query: 639  DFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGEVGLITSMYT 460
            DF  KGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAG++GL+TSM T
Sbjct: 466  DFQDKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQIGLVTSMCT 525

Query: 459  ESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKRAGANKVRDS-TIEETAL 301
            ESNRELV+AVRRAGEL QPVETAFSRKRSFRNKLKKR G NKVRDS TI+E+ L
Sbjct: 526  ESNRELVNAVRRAGELDQPVETAFSRKRSFRNKLKKR-GTNKVRDSATIKESVL 578


>ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355522645|gb|AET03099.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 594

 Score =  814 bits (2102), Expect = 0.0
 Identities = 447/608 (73%), Positives = 484/608 (79%), Gaps = 14/608 (2%)
 Frame = -3

Query: 2079 MIITRTSALMLHLQNPPIRYHQFFF-SHFTHSLLCNPT--SVSSPFINRKPRSFFS---- 1921
            M +TR SAL LHLQN PIRYHQFFF S F ++L+ NPT  S SS   N     FFS    
Sbjct: 1    MNVTR-SALKLHLQNSPIRYHQFFFFSRFNNALIRNPTFSSSSSSLFNFNATRFFSVTLP 59

Query: 1920 ---SQTRAFGXXXXXXXXSPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRP 1750
                QT+ F            E   G RDTFFAE++V WSS+GLS TLS ALSNI L+ P
Sbjct: 60   RQTHQTQPF-----VGSAVSSEDFNG-RDTFFAEDNVSWSSIGLSHTLSRALSNIALNTP 113

Query: 1749 SLVQASSIPSVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHTGSDQEVSP-SR 1573
            SLVQASSIPSVLSGKDVVIAAETGSGKTYSYL+PLIDKLR  EE+SL   SD+E+SP +R
Sbjct: 114  SLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEISPPAR 173

Query: 1572 KVLLVLCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLN 1393
            KVLLVLCPNVQLCEQVVRMANSLC DN ETIVS AAICG+QGWPI+EPD+IVTTPAALLN
Sbjct: 174  KVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLN 233

Query: 1392 YVDVDRHRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVAEL 1213
            +VDVDR RRMEFM GVKYVVFDEADMLLCGSFQNKVIRLINLLR+DEKLLSRSK SV+EL
Sbjct: 234  HVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSEL 293

Query: 1212 PMXXXXXXXSHDALEVEEELPTEATSEXXXXXXXXXXXXXXDIANINNEALSVXXXXXXX 1033
            P+       SHDA E EEE PTEA S+               IANINNEA SV       
Sbjct: 294  PVTLESSLSSHDASEGEEEFPTEAMSDEEDDDNED-------IANINNEAESVKKTRRDW 346

Query: 1032 XXXXXXXXK--QYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIE 859
                    +  QYVFVAATLP NGKKTAGA+LKHMFPDAEWVSGNYLHCHNPRLKQRWIE
Sbjct: 347  RRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIE 406

Query: 858  VTVDTQVDELIKAVKHSFGYEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYH 679
            VTVDTQV ELI+AV HS   EDL+   GIHRTMVFANTVEAVEAV KIL  +G+ECLRYH
Sbjct: 407  VTVDTQVKELIRAVNHSLKLEDLDIGSGIHRTMVFANTVEAVEAVVKILGYAGLECLRYH 466

Query: 678  KNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTA 499
            KNCTL+ERAQTLVDF+ KGGVLVCTDAAARGVDIPNV HVIQADFATSAVDFLHR+GRTA
Sbjct: 467  KNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTA 526

Query: 498  RAGEVGLITSMYTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKRAGANKVRDS- 322
            RAG++GL+TSMYTESNRELVDAVRRAGELG PVETAFSRKRSFRNK+KK+A ANKVRDS 
Sbjct: 527  RAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKASANKVRDSA 586

Query: 321  TIEETALA 298
            TIEE+  A
Sbjct: 587  TIEESLTA 594


>ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 577

 Score =  813 bits (2099), Expect = 0.0
 Identities = 451/600 (75%), Positives = 485/600 (80%), Gaps = 7/600 (1%)
 Frame = -3

Query: 2079 MIITRTSALMLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSPFINRKPRSFFS------S 1918
            MI+TR SALMLHLQNPPIRYH  FFSHF+ +    PT  S      KPR FFS      +
Sbjct: 1    MIVTR-SALMLHLQNPPIRYH--FFSHFSLA----PTFPSL----FKPR-FFSITTPRQA 48

Query: 1917 QTRAFGXXXXXXXXSPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQ 1738
            QTR F         S  +GS G RDTFFAEE+V WSSLGLSDT+S ALSNIGL+RPSLVQ
Sbjct: 49   QTRTF---VSAVASSSSQGSNG-RDTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQ 104

Query: 1737 ASSIPSVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHTGSDQEVSPSRKVLLV 1558
            ASS+PSVLSGKDV+IAAETGSGKTYSYLVPLIDKLR  +E SL   SD+EV+   KVLLV
Sbjct: 105  ASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRVTQERSLLAVSDREVTSLHKVLLV 164

Query: 1557 LCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVD 1378
            LCPNVQLCEQVVRMANSLC+D+ ETIVS AAICG+QGWPI+EPDVIVTTPAALLNYVD+D
Sbjct: 165  LCPNVQLCEQVVRMANSLCKDDSETIVSAAAICGKQGWPIREPDVIVTTPAALLNYVDLD 224

Query: 1377 RHRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVAELPMXXX 1198
            R RR+EFMRGVKYVVFDEAD+LLCGSFQNKVIRLINLLRFDEKLLSRSK SVAE PM   
Sbjct: 225  RTRRVEFMRGVKYVVFDEADLLLCGSFQNKVIRLINLLRFDEKLLSRSKKSVAEFPMKQE 284

Query: 1197 XXXXSHDALEVEEELPTEATSEXXXXXXXXXXXXXXDIANINNEALSVXXXXXXXXXXXX 1018
                S DA E EE+L TEA  E               IA+INNEA +V            
Sbjct: 285  SSLSSEDAFEGEEKLETEAILEEDNNDKED-------IADINNEAENVKLRDWRRVRKNY 337

Query: 1017 XXXKQYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQV 838
               KQYVFVAATLP NGKKTAG +LK+MFPDAEWV G+YLHCHNPRL+Q+WIEVTVDTQV
Sbjct: 338  ERSKQYVFVAATLPVNGKKTAGGVLKYMFPDAEWVCGDYLHCHNPRLEQKWIEVTVDTQV 397

Query: 837  DELIKAVKHSFGYEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYHKNCTLEE 658
            DELIKAV H F  EDL NAGGIHRTMVFANTVEAVEAVAKIL+ SGIEC RYHKNCTLEE
Sbjct: 398  DELIKAVNHRFRSEDLVNAGGIHRTMVFANTVEAVEAVAKILLHSGIECSRYHKNCTLEE 457

Query: 657  RAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGEVGL 478
            RAQTLVDFH KGGVLVCTDAAARGVDIPNVLHVIQ DFATSAVDFLHRVGRTARAG+ GL
Sbjct: 458  RAQTLVDFHDKGGVLVCTDAAARGVDIPNVLHVIQVDFATSAVDFLHRVGRTARAGQFGL 517

Query: 477  ITSMYTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKRAGANKVRDST-IEETAL 301
            +TSMYTESNRELV+AVRRAGEL QPVETAFSRKRSFRNKLKKR GANKVRDS  I+E+ L
Sbjct: 518  VTSMYTESNRELVNAVRRAGELDQPVETAFSRKRSFRNKLKKR-GANKVRDSAPIKESVL 576


>ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Vitis vinifera]
            gi|296086509|emb|CBI32098.3| unnamed protein product
            [Vitis vinifera]
          Length = 593

 Score =  613 bits (1580), Expect = e-173
 Identities = 326/550 (59%), Positives = 396/550 (72%), Gaps = 10/550 (1%)
 Frame = -3

Query: 1917 QTRAFGXXXXXXXXSPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQ 1738
            +TRAFG              +   +TFFA++ V W+SLG+SD L+ ALS IG+ RPSLVQ
Sbjct: 58   RTRAFGTASAASQ------DRNGAETFFADQGVSWASLGVSDRLTRALSTIGIERPSLVQ 111

Query: 1737 ASSIPSVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHTGSDQEVSPSRKVLLV 1558
            A+ IP +LSG DVV+AAETGSGKT+ YLVPLIDKL      S+   +DQE     ++ LV
Sbjct: 112  AACIPYILSGNDVVVAAETGSGKTHGYLVPLIDKLCGTPNDSVDASTDQESRHLHQLCLV 171

Query: 1557 LCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNY---V 1387
            LCPNV LCEQVV+MAN LC DNGE ++ V A+CGRQGWP++EPD+IV+TPAA LN    +
Sbjct: 172  LCPNVMLCEQVVQMANCLCGDNGEPLLRVVAVCGRQGWPVKEPDIIVSTPAAFLNNLNAI 231

Query: 1386 DVDRHRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVAELPM 1207
            D ++ RR  F+RGVK VVFDEADMLLCGSFQN+VIRLI++LRFDEK+LSR K SV +  M
Sbjct: 232  DPEKQRRSNFLRGVKCVVFDEADMLLCGSFQNQVIRLIDMLRFDEKILSRIKKSVPDKQM 291

Query: 1206 XXXXXXXSH-------DALEVEEELPTEATSEXXXXXXXXXXXXXXDIANINNEALSVXX 1048
                    H       D  E EE+    +  E              +I     E  S+  
Sbjct: 292  ELESDSMLHFYSESEKDEEETEEQTEIISDEEENVVGEPVVEGFTEEI-----EVGSIKK 346

Query: 1047 XXXXXXXXXXXXXKQYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQR 868
                         KQY+FVAATLP NGKKTAG +LK MFPDA WVSG YLHCHNPRL+Q+
Sbjct: 347  KDWRRVRKNYERSKQYIFVAATLPVNGKKTAGGVLKRMFPDAHWVSGGYLHCHNPRLEQK 406

Query: 867  WIEVTVDTQVDELIKAVKHSFGYEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECL 688
            WIEVTVDTQVD LI AVK  F  + L++  G+ RTMVFANTVEAVEA++KIL ++G+EC 
Sbjct: 407  WIEVTVDTQVDALIDAVKQGFRSKVLDSGVGVSRTMVFANTVEAVEAISKILHRAGVECF 466

Query: 687  RYHKNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVG 508
            RYH++ +LEERA+TLVDF +KGGVLVCTD+AARG+DIPN+ HVIQADFATSA+DFLHRVG
Sbjct: 467  RYHRDSSLEERAKTLVDFQQKGGVLVCTDSAARGLDIPNISHVIQADFATSALDFLHRVG 526

Query: 507  RTARAGEVGLITSMYTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKRAGANKVR 328
            RTARAG+ GL+TS+YTESNR+LV A+R+A +LGQPV+ AFSRKRSFRNKLKKR G NK+ 
Sbjct: 527  RTARAGQFGLVTSLYTESNRDLVAAIRQADKLGQPVDAAFSRKRSFRNKLKKR-GTNKLG 585

Query: 327  DSTIEETALA 298
            D  +EE  LA
Sbjct: 586  D--VEERVLA 593


>ref|XP_004155399.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Cucumis
            sativus]
          Length = 591

 Score =  588 bits (1517), Expect = e-165
 Identities = 324/585 (55%), Positives = 401/585 (68%), Gaps = 10/585 (1%)
 Frame = -3

Query: 2061 SALMLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSPFINRKPRSFFSSQTRAFGXXXXXX 1882
            S   LHL+   +     F    ++ L+ N  S+    +    R   S Q+RA G      
Sbjct: 6    SVSALHLERLTLSSKLLFSLKNSNLLVPNSCSIRIGLVCL--RQACSRQSRAVGTVAASA 63

Query: 1881 XXSPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQASSIPSVLSGKD 1702
              +  +G    +DTF+A E V W+SLG+SDT+S AL ++G+ RPSL+QA+ +PS++SG D
Sbjct: 64   ASTAADGI--GKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGND 121

Query: 1701 VVIAAETGSGKTYSYLVPLIDKLREAEEHSLHTGSDQEVSPSRKVLLVLCPNVQLCEQVV 1522
            VVIAAETGSGKT+ YLVPLI+K+         T  D ++    K+ LVLCPNV LCEQVV
Sbjct: 122  VVIAAETGSGKTHGYLVPLINKICCEHGEDKLTDGDHDLPSLNKLSLVLCPNVMLCEQVV 181

Query: 1521 RMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVDRHRRMEFMRGVK 1342
            +MAN+LC ++G++I+ VAAICGRQGWP+ +PD++V+TPAALLNY++ +R RR  F+R VK
Sbjct: 182  QMANALCDEHGKSILRVAAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAVK 241

Query: 1341 YVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVAELPMXXXXXXXSHDALEVE 1162
            +VVFDEADMLL GSFQNKVIRLINLLRF+EKLLSRSK    +L M       S   ++ E
Sbjct: 242  HVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPEKL-MGLEADPLSQLIVQDE 300

Query: 1161 EELPTEATSEXXXXXXXXXXXXXXDIANINN----------EALSVXXXXXXXXXXXXXX 1012
            ++L TE +SE                 + N           E +S               
Sbjct: 301  DDLQTETSSEGEGEGEGEGEEEGEGEESYNEVESNSIQDDTECVSGKVNDWRRIRKSYKR 360

Query: 1011 XKQYVFVAATLPKNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVDE 832
             KQY+FVAATLP NGKKTAGA+L+ MFPDA WVSG YLHCHNPRL+QRW+EVT D QVDE
Sbjct: 361  SKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHNPRLEQRWVEVTTDNQVDE 420

Query: 831  LIKAVKHSFGYEDLENAGGIHRTMVFANTVEAVEAVAKILMQSGIECLRYHKNCTLEERA 652
            LIKAV  S     + + G I RTMVFANTVE VEAVA IL+ +G EC RYHK+ +LEER+
Sbjct: 421  LIKAVNQSKSQLRVPDDGVI-RTMVFANTVETVEAVANILLGAGKECFRYHKDRSLEERS 479

Query: 651  QTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGEVGLIT 472
            + L DF  +GGV VCTDAAARGVDIPNV HVIQADFATSAVDFLHR+GRT RAG+ GL+T
Sbjct: 480  KILADFRVEGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTGRAGQHGLVT 539

Query: 471  SMYTESNRELVDAVRRAGELGQPVETAFSRKRSFRNKLKKRAGAN 337
            S+YT++NR+LV AVRRA  L QPVE AFSRKRSFRNKLKK+  AN
Sbjct: 540  SLYTKANRDLVSAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAN 584


Top