BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015059
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   683   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   683   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   621   e-175
ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2...   619   e-175
emb|CBI35070.3| unnamed protein product [Vitis vinifera]              616   e-174

>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  683 bits (1763), Expect = 0.0
 Identities = 331/352 (94%), Positives = 340/352 (96%)
 Frame = +1

Query: 1    RILRPNRTTDTTGRMQILDDDGLAAPGEILRPNDIYINKQSPIDTRIPNTGSAANLPDSA 180
            RILRPNRT DT GRMQILDDDG+AAPGEILRP DIYINKQSPIDTR P TGSAANLPDSA
Sbjct: 801  RILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSAANLPDSA 860

Query: 181  YRSTAQTFKGHGGEVVDRVVLSSDKNNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTI 360
            YRS AQ+FKG+GGEVVDRVVL SDK+NN+CIKFLIRHTRRPELGDKFSSRHGQKGVCGTI
Sbjct: 861  YRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCGTI 920

Query: 361  VQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH 540
            V QEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH
Sbjct: 921  VPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH 980

Query: 541  ADKVETISETLVEKGFNYCGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 720
            ADKVETISETLV KGFNY GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS
Sbjct: 981  ADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1040

Query: 721  GPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRACGL 900
            GPRV+LTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLMLSSDPFEVQVC ACGL
Sbjct: 1041 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGL 1100

Query: 901  LGYYNHKLKTGICSSCKNGEQISTMKLPYACKLLIQELQSMNIVPRLKLADA 1056
            LGYYNHKLKTGICSSCKNG+ ISTMKLPYACKL+IQELQSMNIVPRLKLADA
Sbjct: 1101 LGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1152


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score =  683 bits (1763), Expect = 0.0
 Identities = 331/352 (94%), Positives = 340/352 (96%)
 Frame = +1

Query: 1    RILRPNRTTDTTGRMQILDDDGLAAPGEILRPNDIYINKQSPIDTRIPNTGSAANLPDSA 180
            RILRPNRT DT GRMQILDDDG+AAPGEILRP DIYINKQSPIDTR P TGSAANLPDSA
Sbjct: 815  RILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSAANLPDSA 874

Query: 181  YRSTAQTFKGHGGEVVDRVVLSSDKNNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTI 360
            YRS AQ+FKG+GGEVVDRVVL SDK+NN+CIKFLIRHTRRPELGDKFSSRHGQKGVCGTI
Sbjct: 875  YRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCGTI 934

Query: 361  VQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH 540
            V QEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH
Sbjct: 935  VPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGH 994

Query: 541  ADKVETISETLVEKGFNYCGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 720
            ADKVETISETLV KGFNY GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS
Sbjct: 995  ADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1054

Query: 721  GPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRACGL 900
            GPRV+LTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLMLSSDPFEVQVC ACGL
Sbjct: 1055 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGL 1114

Query: 901  LGYYNHKLKTGICSSCKNGEQISTMKLPYACKLLIQELQSMNIVPRLKLADA 1056
            LGYYNHKLKTGICSSCKNG+ ISTMKLPYACKL+IQELQSMNIVPRLKLADA
Sbjct: 1115 LGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  621 bits (1602), Expect = e-175
 Identities = 304/354 (85%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = +1

Query: 1    RILRPNRTTDTTGRMQILDDDGLAAPGEILRPNDIYINKQSPIDTRIPNTGSAANLPDSA 180
            RI+RPNR  D TG MQILDDDGLAAPGEI+RPNDIY+NKQSPI   I        +PD+A
Sbjct: 808  RIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPI---IMKGSPLPGIPDNA 864

Query: 181  YRSTAQTFKGHGGE--VVDRVVLSSDKNNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 354
            YR   Q FKG  GE  VVDRV LS+DKN+ LCIKFLIR TRRPELGDKFSSRHGQKGVCG
Sbjct: 865  YRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGVCG 924

Query: 355  TIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 534
            TIVQQEDFPFSE+GICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 925  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 984

Query: 535  GHADKVETISETLVEKGFNYCGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 714
            GHADKV+ ISETL+++GF+Y GKDF+YSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 985  GHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1044

Query: 715  GSGPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRAC 894
            GSGPRV+LTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR C
Sbjct: 1045 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVC 1104

Query: 895  GLLGYYNHKLKTGICSSCKNGEQISTMKLPYACKLLIQELQSMNIVPRLKLADA 1056
            GLLGYYNHKLKTGICSSCKNG+ ISTMKLPYACKLLIQELQSMNIVPRLKLA+A
Sbjct: 1105 GLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula]
            gi|355521495|gb|AET01949.1| DNA-directed RNA polymerase
            III subunit RPC2 [Medicago truncatula]
          Length = 653

 Score =  619 bits (1597), Expect = e-175
 Identities = 303/353 (85%), Positives = 325/353 (92%), Gaps = 1/353 (0%)
 Frame = +1

Query: 1    RILRPNRTTDTTGRMQILDDDGLAAPGEILRPNDIYINKQSPIDTRIPNTGSAANLPDSA 180
            RI RP+R  +    MQILDDDG+A+PGEI+RP DIYINK+SP +T+  N  S+ NLPDSA
Sbjct: 306  RIERPDRALNN---MQILDDDGIASPGEIIRPTDIYINKKSPTETQ--NKVSSTNLPDSA 360

Query: 181  YRSTAQTF-KGHGGEVVDRVVLSSDKNNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 357
            YRS   TF K HGGEVVD+V L +DK++N+CIKFL RHTRRPELGDKFSSRHGQKGVCGT
Sbjct: 361  YRSNYSTFNKCHGGEVVDKVALCNDKDSNMCIKFLTRHTRRPELGDKFSSRHGQKGVCGT 420

Query: 358  IVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSG 537
            IVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCG+FHYGSAFGE SG
Sbjct: 421  IVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGKFHYGSAFGEESG 480

Query: 538  HADKVETISETLVEKGFNYCGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 717
            HADKVETIS+TLV+ GFNY GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 481  HADKVETISKTLVKHGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 540

Query: 718  SGPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRACG 897
            SGP+ L+TRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDP+EVQVCRACG
Sbjct: 541  SGPKALITRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPYEVQVCRACG 600

Query: 898  LLGYYNHKLKTGICSSCKNGEQISTMKLPYACKLLIQELQSMNIVPRLKLADA 1056
            LLGYYNHKLK G+CSSCKNG+QISTMKLPYACKLLIQELQSMNIVPRLKL DA
Sbjct: 601  LLGYYNHKLKAGVCSSCKNGKQISTMKLPYACKLLIQELQSMNIVPRLKLEDA 653


>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  616 bits (1588), Expect = e-174
 Identities = 301/354 (85%), Positives = 323/354 (91%), Gaps = 2/354 (0%)
 Frame = +1

Query: 1    RILRPNRTTDTTGRMQILDDDGLAAPGEILRPNDIYINKQSPIDTRIPNTGSAANLPDSA 180
            RI+RP +      RMQILDDDGLAAPGEI++PNDIYINK+SPI T+ P   S   LPDSA
Sbjct: 109  RIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLI-SPVGLPDSA 167

Query: 181  YRSTAQTFKGHGGE--VVDRVVLSSDKNNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 354
            Y+ + QTFKG  GE  VVDRV L SDKN+NLCIKFLIRHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 168  YKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCG 227

Query: 355  TIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 534
            TI+QQEDFPFSE+GICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 228  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 287

Query: 535  GHADKVETISETLVEKGFNYCGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 714
            GHADKVETIS+TLV+ GF+Y GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 288  GHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 347

Query: 715  GSGPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRAC 894
            GSGPRV+LTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM+SSDPFEVQVCR C
Sbjct: 348  GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 407

Query: 895  GLLGYYNHKLKTGICSSCKNGEQISTMKLPYACKLLIQELQSMNIVPRLKLADA 1056
            GLLGYYNHKLK GICS+CKNG+ ISTMKLPYACKLL QELQ+MN+VPRLKL +A
Sbjct: 408  GLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 461