BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015055
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containi...   290   9e-77
ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containi...   286   1e-75
ref|XP_003610755.1| Pentatricopeptide repeat-containing protein ...   278   5e-73
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...   254   6e-66
ref|XP_002314678.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57

>ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 543

 Score =  290 bits (742), Expect = 9e-77
 Identities = 141/176 (80%), Positives = 155/176 (88%)
 Frame = +2

Query: 5   EFGVNKDTAALNALMDALVKGDSVEHAQSVLLEFKSLVPLSSHTFNVLIHGWCKVRNFDQ 184
           +FGVNKDTAALN L+DALVKGDSVEHA  V+LEFK L+PLSSH+FNVL+HGWC+ R FD 
Sbjct: 222 KFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRARKFDN 281

Query: 185 ARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMH 364
           ARKAMEDMKE G +PDVFSYT+FIEAYC ++DFRKVDQVLEEM+ NGC PNAVTYT VM 
Sbjct: 282 ARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVML 341

Query: 365 ALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
            LGKAGQLS+ALEVYEKMK DG V DTP YS +IFILGKAGRLKDA DVFEDMPKQ
Sbjct: 342 HLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQ 397



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/120 (29%), Positives = 53/120 (44%)
 Frame = +2

Query: 164 KVRNFDQARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAV 343
           K      A    EDM + G+  DV +Y T I   C         ++L+EM+   C PN  
Sbjct: 380 KAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVG 439

Query: 344 TYTIVMHALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDM 523
           TY  ++    K  ++     + + M  + I PD   YS L+  L K G++ DA    E+M
Sbjct: 440 TYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEM 499



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
 Frame = +2

Query: 11  GVNKDTAALNALMDALVKGDSVEHAQSVLLEF-KSLVPLSSHTFNVLIHGWCKVRNFDQA 187
           G   DT   + ++  L K   ++ A  V  +  K  V     T+N +I   C     + A
Sbjct: 363 GCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETA 422

Query: 188 RKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMHA 367
            + +++M++    P+V +Y   ++  C+ K  + +  +L+ M  N   P+  TY+++++A
Sbjct: 423 LRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNA 482

Query: 368 LGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPK 529
           L K G++++A    E+M   G  P       L   L     L++   V E M +
Sbjct: 483 LCKTGKVADAYSFLEEMVLKGFTPKPSTLKGLAGELESLSMLEEKERVEEWMDR 536


>ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 558

 Score =  286 bits (732), Expect = 1e-75
 Identities = 140/176 (79%), Positives = 154/176 (87%)
 Frame = +2

Query: 5   EFGVNKDTAALNALMDALVKGDSVEHAQSVLLEFKSLVPLSSHTFNVLIHGWCKVRNFDQ 184
           +FGV KDTAALN L+DALVKGDSVEHA  V+LEFK  +PLSS +FNVL+HGWC+ R+FD 
Sbjct: 224 KFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFDN 283

Query: 185 ARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMH 364
           ARKAMEDMKEHG +PDVFSYT FIEAY  ++DFRKVDQVLEEM+ NGC PNAVTYT VM 
Sbjct: 284 ARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVML 343

Query: 365 ALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
            LGKAGQL +ALEVYEKMKSDG V DTPFYSS+IFILGKAGRLKDA DVFEDMPKQ
Sbjct: 344 HLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQ 399



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/120 (28%), Positives = 55/120 (45%)
 Frame = +2

Query: 164 KVRNFDQARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAV 343
           K      A    EDM + G+  DV +Y + I   C         ++L+EM+   C PN  
Sbjct: 382 KAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVG 441

Query: 344 TYTIVMHALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDM 523
           TY  ++    K  ++     + + M  + I PD   YS L+  L K+G+++DA    E+M
Sbjct: 442 TYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEM 501


>ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512090|gb|AES93713.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  278 bits (710), Expect = 5e-73
 Identities = 132/177 (74%), Positives = 156/177 (88%)
 Frame = +2

Query: 2   GEFGVNKDTAALNALMDALVKGDSVEHAQSVLLEFKSLVPLSSHTFNVLIHGWCKVRNFD 181
           G++GV KDTAALN L+DALVKG S+E A +VL EFKS VPLSS +FN+LI+GWCKVRNF+
Sbjct: 273 GKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFE 332

Query: 182 QARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVM 361
           +ARK ME+ KEHG +PDVF+Y  FIE+YC DKDFRKVD+VLEEM+GNGC PNAVTYTI++
Sbjct: 333 KARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILL 392

Query: 362 HALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
              GKAGQLS+ALE YE+MK DGIVPDTPFYSSL++ILGKAGRLKDA +VF+DMPKQ
Sbjct: 393 LGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQ 449



 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
 Frame = +2

Query: 11  GVNKDTAALNALMDALVKGDSVEHAQSVLLEF-KSLVPLSSHTFNVLIHGWCKVRNFDQA 187
           G+  DT   ++LM  L K   ++ A  V  +  K  V     T+N +I   C     + A
Sbjct: 415 GIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETA 474

Query: 188 RKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMHA 367
            + +++M+E    PD+ +Y   ++  C+ K  + +  +L+ M  +   P+  TYT+++ +
Sbjct: 475 LRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQS 534

Query: 368 LGKAGQLSEALEVYEKMKSDGIVP 439
           L  +G+L EA   +E+M S G  P
Sbjct: 535 LSNSGKLVEACTFFEEMVSKGFTP 558


>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  254 bits (649), Expect = 6e-66
 Identities = 123/175 (70%), Positives = 139/175 (79%)
 Frame = +2

Query: 8   FGVNKDTAALNALMDALVKGDSVEHAQSVLLEFKSLVPLSSHTFNVLIHGWCKVRNFDQA 187
           FGV KDT A+N LMDALVK +SVEHA  V +EFK  + L+ HTFNVLIHGWCK R  D A
Sbjct: 217 FGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNA 276

Query: 188 RKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMHA 367
            K+M +MKEHG  PDV SYT+ +EAYCR+KDFRKV+ VL EM+  GC PN VTYTIVMHA
Sbjct: 277 LKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHA 336

Query: 368 LGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
           LGK  ++S+ALEVYEKMK    VPDT FYSSLI+IL KAGRLKDARDVFEDM KQ
Sbjct: 337 LGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQ 391



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +2

Query: 23  DTAALNALMDALVKGDSVEHAQSVLLEF--KSLVPLSSHTFNVLIHGWCKVRNFDQARKA 196
           DT+  ++L+  L K   ++ A+ V  +   +  +P    T+N +I   C     + A K 
Sbjct: 361 DTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIP-DVLTYNTMISAACMHSQEEDALKL 419

Query: 197 MEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMHALGK 376
           +  M+E    PD+ +Y+  ++  CR+   + +  +L  M  N       TY++++H L K
Sbjct: 420 LLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCK 479

Query: 377 AGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
           +G+L  A   +E+M S G+VP    +  L+  L K   + +A++  E +  Q
Sbjct: 480 SGKLEHACLFFEEMVSKGLVPKDCTHKLLLKELEKKS-MVEAKERVEKLMSQ 530


>ref|XP_002314678.1| predicted protein [Populus trichocarpa] gi|222863718|gb|EEF00849.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/176 (61%), Positives = 133/176 (75%)
 Frame = +2

Query: 5   EFGVNKDTAALNALMDALVKGDSVEHAQSVLLEFKSLVPLSSHTFNVLIHGWCKVRNFDQ 184
           ++G +KD  ALN LMDALVK   VE A S  LEFK  + L S +FN+LIHG+CK R F  
Sbjct: 185 KYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMFVV 244

Query: 185 ARKAMEDMKEHGIDPDVFSYTTFIEAYCRDKDFRKVDQVLEEMKGNGCLPNAVTYTIVMH 364
           ARK ME+M++HG  PDV SY+ FI AYC  KDFR V+ V +EM+  GC PN +TYT VMH
Sbjct: 245 ARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMH 304

Query: 365 ALGKAGQLSEALEVYEKMKSDGIVPDTPFYSSLIFILGKAGRLKDARDVFEDMPKQ 532
           ALGKA QL+EALEVYEKMK +G +PD+ FYSSLI++L ++GR+KDA DVFEDM KQ
Sbjct: 305 ALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQ 360