BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015031
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    65   7e-09
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    64   1e-08
gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    58   7e-07

>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/69 (46%), Positives = 37/69 (53%)
 Frame = -3

Query: 313 LIWLVFHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDCPCVR 134
           LIWL   + VPTLS+LH   I P+  C              C  EDET LHC+RDC   R
Sbjct: 135 LIWLACQNVVPTLSLLHRRNIAPSPTCAR------------CGEEDETFLHCVRDCHFSR 182

Query: 133 RIWVKLGFT 107
            IW K+GFT
Sbjct: 183 SIWQKIGFT 191


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/76 (43%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = -3

Query: 328  TCPRK---LIWLVFHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHC 158
            T P K   LIWL  H++ PTLS+LHH  + P A C              C   DE+ LHC
Sbjct: 984  TAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATC------------SRCGENDESFLHC 1031

Query: 157  IRDCPCVRRIWVKLGF 110
            +RDC     IW KLGF
Sbjct: 1032 VRDCKHSAAIWHKLGF 1047


>gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 86

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/70 (40%), Positives = 35/70 (50%)
 Frame = -3

Query: 313 LIWLVFHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDCPCVR 134
           L+WL  H+SVPT+S+L+H  I PTA C              C    ET LHC+ DC   +
Sbjct: 28  LVWLACHNSVPTISLLNHRNIAPTATC------------SRCNLHVETFLHCVHDCHNSK 75

Query: 133 RIWVKLGFTD 104
            IW    F D
Sbjct: 76  NIWQHSRFND 85