BLASTX nr result

ID: Glycyrrhiza24_contig00015030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015030
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...   306   3e-81
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   272   5e-71
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   272   5e-71
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   268   5e-70
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...   243   2e-62

>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like
            [Glycine max]
          Length = 666

 Score =  306 bits (783), Expect = 3e-81
 Identities = 147/167 (88%), Positives = 157/167 (94%)
 Frame = -1

Query: 654  GEMAVSLFNQMVQSGVKPNQVTFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPQVDHYT 475
            G+MAV LFNQMVQSGVKPN VTFTSVLHACSHAGLV+EG SLF FMLKQHQII  VDHYT
Sbjct: 500  GKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYT 559

Query: 474  CIIDLLGRAGRLNDAYDLIRTMPITPNHAVWGALLGACVIHENVELGEIAARWAFELEPE 295
            C+IDLLGRAGRLNDAY+LIRTMPITPNHAVWGALLGACVIHENVELGE+AARW F+LEPE
Sbjct: 560  CMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPE 619

Query: 294  NTGNYVLLAKLYATVGRWRDAEKVRDMVNEVGLRKLPAQSLVEVQNM 154
            NTGNYVLLAKLYA VGRW DAE+VRDMVNEVGLRKLPA SL+EV++M
Sbjct: 620  NTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEVRDM 666


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
            [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
            protein product [Vitis vinifera]
          Length = 676

 Score =  272 bits (695), Expect = 5e-71
 Identities = 126/167 (75%), Positives = 148/167 (88%)
 Frame = -1

Query: 654  GEMAVSLFNQMVQSGVKPNQVTFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPQVDHYT 475
            GE A+SLF+QMVQSGVKPN++TFTS+LHACSHAGLVDEGL LFKFML+ +Q+  + DHYT
Sbjct: 510  GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569

Query: 474  CIIDLLGRAGRLNDAYDLIRTMPITPNHAVWGALLGACVIHENVELGEIAARWAFELEPE 295
            C+IDLLGRAGRL +AY+LIRTM   PNHAVWGALLG+CVIHENVELGE+AA+W FELEP 
Sbjct: 570  CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629

Query: 294  NTGNYVLLAKLYATVGRWRDAEKVRDMVNEVGLRKLPAQSLVEVQNM 154
            NTGNYVLLA +Y+ VGRWRDAE VR M+N +GLRK PA SL+EV+N+
Sbjct: 630  NTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  272 bits (695), Expect = 5e-71
 Identities = 126/167 (75%), Positives = 148/167 (88%)
 Frame = -1

Query: 654  GEMAVSLFNQMVQSGVKPNQVTFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPQVDHYT 475
            GE A+SLF+QMVQSGVKPN++TFTS+LHACSHAGLVDEGL LFKFML+ +Q+  + DHYT
Sbjct: 510  GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569

Query: 474  CIIDLLGRAGRLNDAYDLIRTMPITPNHAVWGALLGACVIHENVELGEIAARWAFELEPE 295
            C+IDLLGRAGRL +AY+LIRTM   PNHAVWGALLG+CVIHENVELGE+AA+W FELEP 
Sbjct: 570  CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629

Query: 294  NTGNYVLLAKLYATVGRWRDAEKVRDMVNEVGLRKLPAQSLVEVQNM 154
            NTGNYVLLA +Y+ VGRWRDAE VR M+N +GLRK PA SL+EV+N+
Sbjct: 630  NTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676


>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  268 bits (686), Expect = 5e-70
 Identities = 125/163 (76%), Positives = 142/163 (87%)
 Frame = -1

Query: 654 GEMAVSLFNQMVQSGVKPNQVTFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPQVDHYT 475
           GE AVSLF QMVQSGVKPN VTFTSVL +CSHAG+VD+GL LFKFMLK HQ IP  DHYT
Sbjct: 508 GETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYT 567

Query: 474 CIIDLLGRAGRLNDAYDLIRTMPITPNHAVWGALLGACVIHENVELGEIAARWAFELEPE 295
           C++DLLGRAGR+++AYDLI+TMP  P HAVWGALLGACV+HENVELGE+AARW FELEP 
Sbjct: 568 CMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPG 627

Query: 294 NTGNYVLLAKLYATVGRWRDAEKVRDMVNEVGLRKLPAQSLVE 166
           NTGNYVLLAKLYA +GRW DAE VR  ++++GLRK PA SL+E
Sbjct: 628 NTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like
            [Cucumis sativus]
          Length = 709

 Score =  243 bits (620), Expect = 2e-62
 Identities = 110/164 (67%), Positives = 141/164 (85%)
 Frame = -1

Query: 654  GEMAVSLFNQMVQSGVKPNQVTFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPQVDHYT 475
            GE AV LFNQMV SG++PN++TFTSVLHACSH GLVD+GL+LFK+M++ +   P  +HYT
Sbjct: 543  GETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYT 602

Query: 474  CIIDLLGRAGRLNDAYDLIRTMPITPNHAVWGALLGACVIHENVELGEIAARWAFELEPE 295
            C++DLLGRAGRL++AYDLI++MP   NH++WGALLGAC+IH+NVELGE+AA   FELEPE
Sbjct: 603  CVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPE 662

Query: 294  NTGNYVLLAKLYATVGRWRDAEKVRDMVNEVGLRKLPAQSLVEV 163
            +TGNY+LLA +YA VGRW+DAE VR +++++GLRK PAQS V V
Sbjct: 663  STGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGV 706