BLASTX nr result

ID: Glycyrrhiza24_contig00015023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015023
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...   191   7e-47
ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   189   2e-46
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   157   9e-37
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...   154   9e-36

>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score =  191 bits (484), Expect = 7e-47
 Identities = 98/158 (62%), Positives = 116/158 (73%)
 Frame = +2

Query: 14  PNQPQPNSIQFHTFDPISNXXXXXXXXXXXXXXXXXXXXXXSFLSRNLSVQSISVAGNLV 193
           P     +SIQFH FDPISN                      SFLSRNLSVQSISV+ NL+
Sbjct: 91  PKSHHSHSIQFHNFDPISNTWKILPPPPPLHHILLHHP---SFLSRNLSVQSISVSDNLI 147

Query: 194 LLAGTTHNLTPALPNPMVFNPLTRRWSLGPALATPRRWCALGASRGVVYVASGIGSHFSV 373
           LLA TTHNLTPAL +P++FNP ++ WS+GPAL  PRRWCALG S G+VYVASGIGSHFSV
Sbjct: 148 LLAATTHNLTPALSHPLIFNP-SQGWSVGPALTNPRRWCALGTSEGMVYVASGIGSHFSV 206

Query: 374 DVARSMEKWNPMKTNEWWEKKMELKDGRFSREAIDAVG 487
           DVA+S+EKW+P+  +  WEKK ++KDGRFSREA+DAVG
Sbjct: 207 DVAKSIEKWDPI-NDPIWEKKTDMKDGRFSREAVDAVG 243


>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/150 (64%), Positives = 107/150 (71%)
 Frame = +2

Query: 38  IQFHTFDPISNXXXXXXXXXXXXXXXXXXXXXXSFLSRNLSVQSISVAGNLVLLAGTTHN 217
           IQFHTFDPIS                       SFLSRNLSVQS+S A  LVLLA TTHN
Sbjct: 90  IQFHTFDPIS--ATWLPLPPHPPLHHLLLRRHPSFLSRNLSVQSVSAANRLVLLAATTHN 147

Query: 218 LTPALPNPMVFNPLTRRWSLGPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEK 397
           L+PALP P++F+PLT+ WS GP L+TPRRWCALG+    VYVASGIGSHFS+ VARS++K
Sbjct: 148 LSPALPRPLIFHPLTKTWSFGPTLSTPRRWCALGSLGPTVYVASGIGSHFSIHVARSLQK 207

Query: 398 WNPMKTNEWWEKKMELKDGRFSREAIDAVG 487
           WN    N  WEKK ELKDGRFSREAIDAVG
Sbjct: 208 WNLQNPNAVWEKKTELKDGRFSREAIDAVG 237


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/174 (49%), Positives = 107/174 (61%), Gaps = 12/174 (6%)
 Frame = +2

Query: 2   TQPKPNQPQPNSIQFHTFDPISNXXXXXXXXXXXXXXXXXXXXXXSFLSRNLSVQSISVA 181
           T    N P  NSIQF  FDPIS+                      SF+SR+L +QSIS +
Sbjct: 85  TNTNHNLPDNNSIQFFNFDPISSRWDSLPPPPPDPPLHLILRHP-SFISRDLPIQSISAS 143

Query: 182 GNLVLLAGTTHNLTPALPNPMVFNPLTRRWSLGPALATPRRWCALGASRGVVYVASGIGS 361
             L+LLA T+H+ +PAL  P+VFNPL+  W+ GP LATPRRWCA G++ G VYVASGIGS
Sbjct: 144 YRLILLAATSHSFSPALSRPLVFNPLSGSWAFGPPLATPRRWCAAGSAHGTVYVASGIGS 203

Query: 362 HFSVDVARSMEKWNPM-----------KTNEW-WEKKMELKDGRFSREAIDAVG 487
            ++ DVA+S+EKW+             KT  W W K  ELK+GRFSR+AIDAVG
Sbjct: 204 QYNTDVAKSLEKWDLQNQKAMISNIRNKTTTWKWVKVKELKNGRFSRDAIDAVG 257


>ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
           gi|449521327|ref|XP_004167681.1| PREDICTED:
           F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
          Length = 375

 Score =  157 bits (397), Expect = 9e-37
 Identities = 84/154 (54%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
 Frame = +2

Query: 32  NSIQFHTFDPISNXXXXXXXXXXXXXXXXXXXXXXSFLSRNLSVQSISVAGNLVLLAGTT 211
           NS+ F  FDPIS+                      SFLSR+L VQS++V+G+L+LLA TT
Sbjct: 82  NSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHP-SFLSRHLPVQSLTVSGHLLLLAATT 140

Query: 212 HNLTPALPNPMVFNPLTRRWSLGPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSM 391
           +NL PALP P++F+P +  W L P L TPRRWCA GA  G VYVASGIGS FS DVARS+
Sbjct: 141 YNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYVASGIGSFFSTDVARSV 200

Query: 392 EKWNPMKTN--EWWEKKMELKDGRFSREAIDAVG 487
           E+W+  K+N  + WEK   LKDG+FSR+AIDAVG
Sbjct: 201 ERWD-FKSNGADGWEKVSGLKDGKFSRDAIDAVG 233


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  154 bits (388), Expect = 9e-36
 Identities = 82/164 (50%), Positives = 104/164 (63%), Gaps = 12/164 (7%)
 Frame = +2

Query: 32  NSIQFHTFDPISNXXXXXXXXXXXXXXXXXXXXXXSFLSRNLSVQSISVAGNLVLLAGTT 211
           NSI+F  FDPIS+                      SF+SR+L +QS++V+G+L+LLA TT
Sbjct: 90  NSIKFFNFDPISSTWDLLPPPPPDPPLRPIIRHP-SFISRHLPIQSVTVSGHLILLAATT 148

Query: 212 HNLTPALPNPMVFNPLTRRWSLGPALATPRRWCALGA-SRGVVYVASGIGSHFSVDVARS 388
            N  PAL  P +FNP++RRWS GP L TPRRWCA GA +   VYVASGIGS FS D+A+S
Sbjct: 149 DNFYPALSRPFIFNPVSRRWSFGPPLTTPRRWCAAGAINNSTVYVASGIGSQFSADIAKS 208

Query: 389 MEKWNPMKTNE----------W-WEKKMELKDGRFSREAIDAVG 487
           +EKW  ++  +          W WEK   LKDGRFSR+AIDA+G
Sbjct: 209 VEKWEFLRDEKRTRSSNQSCLWKWEKVKGLKDGRFSRDAIDAIG 252


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